Silurus meridionalis (southern catfish): 124380586
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Entry
124380586 CDS
T08004
Symbol
tsc1a
Name
(RefSeq) LOW QUALITY PROTEIN: TSC complex subunit 1a
KO
K07206
tuberous sclerosis 1
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04140
Autophagy - animal
smeo04150
mTOR signaling pathway
smeo04218
Cellular senescence
smeo04910
Insulin signaling pathway
smeo05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
124380586 (tsc1a)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
124380586 (tsc1a)
09143 Cell growth and death
04218 Cellular senescence
124380586 (tsc1a)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
124380586 (tsc1a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
124380586 (tsc1a)
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Gene cluster
GFIT
Motif
Pfam:
Hamartin
TolB_like
ZYG-11_interact
Motif
Other DBs
NCBI-GeneID:
124380586
NCBI-ProteinID:
XP_046697663
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Position
27:14125935..14148079
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AA seq
1112 aa
AA seq
DB search
MAKDQPNVFDLLPHLESTDLHELEQVRSVLQENLSADKGSVLLNGLVDYYLDTSSPQALD
LLSSIREPHDKHLLDKLNECMAKPSSRLLTLSLLGHVVRKQPSWIHKIXRFPLLASLLRC
LKTESDVVVLITGVLVLVILLPVIQQTTKQLLFEFFDIFGRLAAWNQRNPGHAQGAYAVH
LHASVYSFFHRLYGMYPCNFVSYLRAHYSMKENVDTFEEVVKPMLEHVRIHPELVTGTKD
YELDPIRWKRFETHDIVIECAKVSLDPKEASCEEGYSSLPDHVPRRLIDSSRSCSELSTP
GSSPCTSMATVRQSLSLSLPHLTVTQHPGHSPQTLRPQGLETMSTGMKEAMWSPSSVCGM
STPPSSRGMSPTTVSDHSHSASQVLGRVPSTPVDGKIPSAFMPSGSSPLPSLSGELEHTA
QHTSITLSHPKTNQEIKNSNHTAINGKGTVDGLSPFSLNELSDFVKRTEKEKEEDAITAE
LLTITQGKPDPLPTPASDSSFSGTTNTPLPLNASIYTPHQNLASTPDRPVNTTSEGDLQP
SWNLWPCFTPIENVLSPSAAEDVSLELFKGSFPYEHLFDLALPKLASLFMEKKTIEYEQK
AGREEVEVGDLSATSPLEVLDRLIQQGHDLHEKVLRSPSLNLLTEPHCGGAGAPDELATL
RSQLLLLHNHLLYERHKREQHALRNRRLLRRVINATALEEQNNSMRAQLRLQEVEIQTLR
ASLQEEQQRSKDLQQDGEAQVEQLHSQLQKLQQERNDYCTKTQELQSDLHECKKKMDKMG
AELQRANNKVCNTGHLLSQLSIKLNNSESLEQQMAFLNKQLLLLGEANQLCVQEVQRLGP
DSHKEHKMLQMCSTRETERLRQSSIQQSQRLEAAQQRITDLETQLTKKEHLILEQKKLLE
NVKNQAKGQLQASENRYLAQKHVTQALQSEMLQLYSQLELARLSNSTPAGGAVEPGSPPN
QKQNGSNASTSAQTCESVKREDTSYACVNGEFLPPSPSSTPSAALINGSQEEGLPMLSCN
SPLAESFLGMHNQVLLKKTKSAYEEEHAHRLHVQSSDPAEKRTELTGSHRLAEEDPDLRP
GDRHRTRAYNIQRRRQQDLRIMDYNEAQQEKT
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atggccaaggaccagccaaatgtgtttgacctcctcccgcatctggagtctacagacctg
catgagctggagcaggtcagaagtgtcctacaagagaaccttagtgcagataaagggtct
gtgcttctcaatggccttgtggattactatctggacactagctctcctcaggctttggac
cttctttcctccatcagggagcctcatgacaagcatcttttggacaagttgaacgagtgc
atggcgaagccgagcagccgacttctgaccctcagtctcctcggacatgttgttcgcaaa
cagccttcgtggattcacaagatcnntcgcttccctctgctcgcttcactactcagatgc
ttgaagactgagtcagatgttgtggttcttataactggagtgttggtgttagtcatcctg
ctacccgtgatacagcagaccactaaacagctcctgtttgagttttttgacatctttgga
cgtcttgcagcttggaatcagagaaacccaggccatgctcagggagcgtatgcagttcac
ctgcacgccagcgtgtactcgttctttcatcgcctctacggcatgtacccctgtaacttt
gtgtcgtacctgcgtgcccactacagcatgaaggagaacgtggacacttttgaggaagta
gttaagccaatgcttgaacacgtgcggatacatccagagctcgttacaggaaccaaagat
tatgaactggacccgattaggtggaagaggttcgagacccatgacatcgtgattgaatgt
gccaaagtgtccctggaccctaaggaagcatcttgtgaggagggctactcatctctgcct
gaccacgtgccacggcgcctcatcgacagcagcaggtcctgctcagagctcagcacccct
ggaagctcaccttgcacttcgatggccacagttcgccagtctctttctctttccttacca
catctgactgtcactcagcacccaggccacagtccacagaccctcaggccacagggtctt
gagacgatgtccacagggatgaaggaggccatgtggagcccttccagtgtgtgtgggatg
agtacccctcccagctctagaggaatgtcccccactactgtctctgatcactcacacagt
gcctcccaagtcttggggcgggtcccgagcacaccagtggatgggaagattccatctgcc
ttcatgccctcagggtcctcccctctcccgtcactctcaggggaactcgagcacactgcc
caacacaccagcattactctctcacatcctaagacgaatcaagagattaaaaatagcaat
cacacagctatcaacggcaaaggtacagttgatggtcttagtcctttttcattgaacgag
ctctctgactttgtgaagaggacggagaaagagaaagaggaggatgccatcacagcagag
ctgctgaccataacccagggtaaacccgaccctctccccacaccagcctcagactcctcc
ttctctggcacaaccaacacgcctctcccattaaacgccagcatttataccccacatcag
aatttggcctccaccccagacaggccagtgaacaccacttcagaaggagatctgcagccg
tcctggaacctgtggccctgtttcactcccatagagaacgtcttgagcccttcagcagct
gaggacgtctctctggagctgtttaaaggttcatttccttatgaacatctctttgacctg
gccttgcccaagctggcctctctgtttatggagaagaagaccattgagtatgagcagaag
gctggcagagaggaggtggaggtgggggacctgtcggctacttcgcctctggaggttctg
gatcgtctcattcaacaaggtcatgaccttcatgaaaaagtattgagatctccttcatta
aacctcttgactgagccacactgtggaggcgccggcgctcctgatgaactggccacgttg
cgcagtcagctgctgcttttgcacaaccatctgctttacgagaggcacaaaagagagcag
catgcactgcgcaaccgccgcctactccgccgtgtcatcaacgccaccgcactggaggag
cagaacaactcgatgagggcccagctgcgactgcaggaagtggagatacagactctgcgg
gcgagtctgcaggaagagcagcagcgttccaaggatttgcagcaggatggagaggcacag
gtggagcagctccacagccagctccagaagcttcagcaagagaggaacgactactgtaca
aagactcaggagctgcagagtgacttgcacgaatgtaagaagaaaatggacaagatgggg
gcggagctgcaaagagccaataacaaagtttgcaatacaggacacctgcttagccagttg
tctatcaagctcaacaacagcgaaagcctggagcaacagatggccttcttgaacaaacag
ctgttactgctgggcgaagccaatcaactgtgtgtacaggaagtccagcgacttggaccc
gactcacataaagagcataagatgctgcagatgtgttccacacgagagactgagaggttg
aggcagagctccattcagcagagccagaggctagaagctgcccagcagcgcatcaccgac
ctggagacccagctcaccaagaaagagcaccttatcctggagcagaagaaactcttggaa
aatgtcaaaaatcaagccaaagggcagctgcaagcttcggagaataggtatcttgcccaa
aaacatgtgactcaggcactacaatcagaaatgcttcagctgtacagtcagcttgagctt
gccagactctcaaacagcacaccagcaggaggagcagtggagccaggcagccctccaaac
cagaagcaaaatggcagtaacgcatccacttcagctcaaacctgtgagtcagtgaaaaga
gaggacacttcttatgcatgtgtgaacggtgagttcctgccgccatctccatcatccaca
ccatccgctgcactaatcaacggcagtcaggaagaaggccttcccatgctgtcctgcaac
tctcctttggctgagagcttcctgggaatgcacaaccaagtgttgctgaagaagaccaag
agtgcgtatgaggaggagcacgcccaccggctgcatgtccagagctcggatcctgctgag
aaacgcaccgagctcaccgggtcccacaggctggcagaagaagaccccgacctccggcct
ggtgatcgacacaggactcgcgcttataacatacagcggcgcagacaacaggacctgcgc
atcatggattacaatgaagcccagcaggagaagacataa
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