Silurus meridionalis (southern catfish): 124380601
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Entry
124380601 CDS
T08004
Symbol
poli
Name
(RefSeq) DNA polymerase iota
KO
K03510
DNA polymerase iota [EC:
2.7.7.7
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
124380601 (poli)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smeo03400
]
124380601 (poli)
Enzymes [BR:
smeo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
124380601 (poli)
DNA repair and recombination proteins [BR:
smeo03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
124380601 (poli)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IMS
IMS_C
UBM
IMS_HHH_1
IMS_HHH
DUF4332
HHH_5
Cdd1
Motif
Other DBs
NCBI-GeneID:
124380601
NCBI-ProteinID:
XP_046697704
LinkDB
All DBs
Position
27:complement(18501330..18506331)
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AA seq
646 aa
AA seq
DB search
MEGHEEEDRDWDTLDTGSPGEGVEEDPRVILHFDMDCFYAQVEMIRNPSLSSKPLGVQQK
YLVVTCNYVARARGVAKLMSVKEALEKCPDLVLVRGEDLTFYREISYKVTELLMSYCPMV
ERLGLDENFMDVTELVESRRKNMDVSQLSFVGHVYGHDVQDVPVQSHVSLAVGSVIASEL
REALFSRLGMTSCAGVAHSKLLAKLVSGTFKPNQQTTLLPHSVQQLLLGLSAASKVPGVG
YRTAERLKVLGVCSVRDLQHVPLRQLVCEFGEVNAKRLQSLAHGVDLTPVTPAGPPQSLS
DEDSFKKISTLCEAQSKITELLLSLTHRMHKDGRLPQTLRLTLRRSSAPSRWFSRESRQS
PIPSHIAHRIINGSPEAVPQLVAIAIKLLQKLVDVREPFHLTLLNVCFTNLQARTSTRNS
ISSFFTSTPTHTSTNSFTQPQALCGSMNPSNSRQSSSSLSSTSSSSTSSSSSSPYFQQPI
KSSSTLPPIPEPSDPRAVPSPPLPTDVDPDVFRALPQHIQEELMSSFQKGPVVEMEECQS
GSAPPTAHADDLITQCQGEAENPGDVSATAEVPEVPPDVDPFVFSQLPVDMQAELLTEWR
RSKLTLKISQKHTSRRTTTSTKRPVAKRSHSSSLLQYFKPSSDKPS
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atggagggacatgaggaggaggacagggactgggacaccctggacaccggatccccaggt
gaaggtgtggaggaagatcctcgcgtgatcctgcattttgacatggactgtttctacgcg
caggtggagatgatccgtaatccttccctgagctccaaacctcttggtgtgcagcagaag
tacctggtcgtcacctgtaactacgtagcgagagctcggggcgtggccaagctgatgtct
gtgaaggaggcgctggagaagtgtcctgacctggtgctggtcagaggagaagatctcacc
ttctacagagagatctcctacaaggtcacagagctcctgatgtcatactgccccatggtg
gagaggttgggtttagatgagaacttcatggatgtgacggagctggtggagagcaggagg
aagaacatggatgtctctcagctctcctttgtgggtcacgtctacggacatgatgtccaa
gacgtacctgtacagtcccatgtgagtctggcagtaggttcagtgatagcgagtgagctg
agggaggcactgttctccagactgggcatgacctcctgtgcgggtgtggctcacagcaag
ctcctggctaaactggtttcaggaacgttcaaacccaaccagcagaccacactgctccct
cacagcgtccaacagctgcttctgggcctgagtgcagccagcaaagtaccaggagtcggt
tacaggacggctgagaggctgaaggttctgggtgtgtgcagtgtgagggatctgcagcat
gttcctctcaggcagttggtgtgtgagtttggagaagtgaatgctaaacgcctccagagc
ctggcgcacggtgtggacctcacccctgtcacccccgccggccccccacagtctctgagt
gatgaggactcatttaagaaaatctccacactgtgtgaagcacagagtaaaatcacagag
ctgctgctgagcctcacacacagaatgcataaggatggcaggttgcctcagacactgaga
ctgactctgagacggagcagtgcaccgagtcgctggttcagtcgagagagcagacagagt
ccgattccctcacacatcgcacacaggatcattaacggcagcccggaggcagtgccccag
ctggttgccatagcgattaaactcttacaaaaactggtggacgttcgcgagccgtttcac
ctcacgctgctgaacgtgtgttttaccaacctccaggccagaacatctaccaggaactcc
atcagctccttcttcacctccacacccacacacacctccactaacagctttacacaacca
caagctttgtgtggaagcatgaacccttcaaactccagacaatcatcatcatcactctca
tccacatcatcttcatccacatcatcatcatcatcctctccatatttccagcagccaatc
aaatccagctccaccttgcctcctattccagaaccttctgatcccagggcagttccctca
ccaccactccccactgatgtagacccagacgtgttcagagctctccctcaacacattcag
gaggaactcatgtccagcttccagaaaggtcctgtggtggagatggaggaatgtcagagt
gggtctgctccacccactgcccacgctgatgacctcatcacacagtgccagggtgaagca
gagaacccgggtgacgtcagtgctacagctgaggttcctgaggttcctcctgacgtagac
ccgtttgtgttctcacagcttcccgtggacatgcaggcggagctgctaacggagtggagg
cggagcaaactcacactaaagatctctcagaaacacacgagcagacgcacgaccacgtct
acgaagcgacctgtggcgaagcgctctcacagctccagcctgctccagtacttcaaaccc
tcgtctgataaaccctcctga
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