Silurus meridionalis (southern catfish): 124380676
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Entry
124380676 CDS
T08004
Symbol
smn1
Name
(RefSeq) survival motor neuron protein 1
KO
K13129
survival motor neuron protein
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smeo03041
]
124380676 (smn1)
Spliceosome [BR:
smeo03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
124380676 (smn1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SMN_YG-box
SMN_Tudor
SMN_G2-BD
TUDOR
Motif
Other DBs
NCBI-GeneID:
124380676
NCBI-ProteinID:
XP_046697825
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Position
27:complement(9916899..9923031)
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AA seq
279 aa
AA seq
DB search
MANGTGDVVFCRGTAQSDDSDIWDDTALIKAYDKAVASFKNALKGEDAMAPLTKEKPGNK
RKNTKKSKSKKKCNTSPDGEWKVGDTCYAYWSQDGNLYAATISSVNLEKGTCVVYYNDYG
NEEEQNLSDLLTDAAEADGESQKITDGQEVASSTEESDRSSTPHQSNQPKHKAKGKSPVL
PPMWGPGFPPVPPPGSHFRMSDNRRGGGPGPAFPGWSPMMPPGPPMIPPPPPISPDMLED
DEALGSMLISWYMSGYHTGYYLGLKQGRREATGKKSHHK
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatggaacaggtgatgttgtgttctgtcgcggaactgctcagagtgacgactcg
gatatatgggacgacacggccttgattaaagcctatgataaagccgtggcatctttcaag
aatgctctgaaaggagaagacgccatggctcccctcaccaaagagaaacctggcaataaa
cggaaaaacaccaaaaagagcaaaagcaagaagaagtgtaacacatctcctgatggagag
tggaaagttggtgatacctgttacgcatattggtcccaagatggaaacctgtacgctgca
accatttcctcagtcaacctggaaaaggggacctgcgtcgtatattacaatgactacggg
aacgaggaggaacagaatctgagcgaccttctcacagacgctgcagaggcggatggagag
tcgcaaaagataactgatgggcaagaggtggcttcttctacagaggagagcgacaggtct
tctactccacatcagtctaatcagccgaaacacaaagctaaaggcaaatctccagtgcta
cctcctatgtggggccctgggtttcctcctgttcctcctcctggctctcactttagaatg
tctgacaatagaagaggtggaggccctggaccggcctttcctggatggtctccaatgatg
cctccagggccaccgatgatcccaccgccaccaccaattagtcctgacatgctggaggat
gatgaggctttaggcagcatgctgatttcatggtacatgagtggctaccacacaggatac
tacttaggcttaaaacaaggtcgcagagaagctaccggaaagaagtcccatcacaaatga
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