Silurus meridionalis (southern catfish): 124380704
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Entry
124380704 CDS
T08004
Symbol
tars1
Name
(RefSeq) threonine--tRNA ligase 1, cytoplasmic
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
124380704 (tars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
smeo01007
]
124380704 (tars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smeo03016
]
124380704 (tars1)
Enzymes [BR:
smeo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
124380704 (tars1)
Amino acid related enzymes [BR:
smeo01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
124380704 (tars1)
Transfer RNA biogenesis [BR:
smeo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
124380704 (tars1)
Prokaryotic type
124380704 (tars1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
TGS
tRNA_SAD
Motif
Other DBs
NCBI-GeneID:
124380704
NCBI-ProteinID:
XP_046697869
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All DBs
Position
27:10190792..10211046
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AA seq
722 aa
AA seq
DB search
MTEVAITDQMQELKVKEGKQGKTAGSGDGGKKKSKAAGDAGGLSEMNPQPRYIEDRLVLY
SKLKAEHDALMAEKAEKESKPIKITLPDGKVVDGESWKSTPYRVACGISQGLADNTVIAK
VNNVVWDLDRPLEEDCSLQLLKFDDEEAQAVYWHSSAHIMGEAMERVYGGCLCYGPPIEN
GFYYDMYLDNEGVSSNDFPCLENLCKKIIKEKQPFERLEVKKETLLEMFKYNKFKCRILN
EKVTTPTTTVYRCGPLIDLCRGPHVRHTGKIKALKIHKNSSTYWEGKADMETLQRVYGIS
FPDPKMLKEWEKFQEEAKNRDHRKLGREQDLFFFHDLSPGSCFFLPKGAYIYNTLVEFIR
SEYRKRGFQEVVTPNVYNSKLWQTSGHWQHYSENMFSFEVEKETFALKPMNCPGHCLMFD
HRPRSWRELPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMDQIESEIKGCLE
FLRAVYEVFGFTFKLNLSTRPEKFLGEPEVWEQAEKQLENSLNEFGEKWILNPGDGAFYG
PKIDIQIKDAIGRYHQCATIQLDFQLPIRFNLTFVSHDGDDKKRPVIIHRAILGSVERMI
AILTENYGGKWPLWLSPSQVMVVPVGPTCEDYAQRVQKEFHNAGLMTDVDLDQGCTLNKK
IRNAQLAQYNFILVVGEKEKSSDTVNVRTRDNKVHGERSLTDCMERLRQLKASRTRNAEE
EF
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgacggaagtggccattactgatcagatgcaggagctcaaagtgaaagaagggaagcag
ggcaagacagcaggcagtggtgatggagggaagaagaagagcaaagcagctggagatgca
gggggtctatctgagatgaatcctcaaccacgatatatagaagaccgtctggttttgtac
agcaagctaaaggctgaacacgatgctctgatggctgaaaaagctgagaaggagagcaag
ccgatcaagatcaccctgcccgacgggaaagtggtggacggcgagtcctggaaatccaca
ccgtaccgggttgcctgcggcatcagccaaggccttgccgataacacggtgattgccaaa
gtgaataacgttgtgtgggaccttgacagaccattggaggaggactgcagtttgcagctt
ctcaagtttgatgatgaggaagcacaagcagtgtactggcactccagcgcccacattatg
ggcgaagccatggagagagtgtacggaggctgcctgtgttacggacctcctatagagaac
ggtttctactacgacatgtacctggacaatgaaggcgtatcgagtaatgacttcccctgt
ctggagaacctgtgtaaaaagattatcaaggagaagcagccctttgagcggttggaggtt
aagaaggagactcttctggaaatgttcaagtacaacaagtttaagtgtaggatcctgaac
gagaaagttaccaccccgacgactacggtttacaggtgtgggcccttgattgacctatgt
agaggaccccatgtaagacacactgggaagatcaaggccttgaagattcacaagaattca
tccacttattgggaaggcaaggcggacatggagaccttgcagcgcgtttacggcatctcc
ttccccgacccgaagatgctgaaggagtgggagaaattccaagaagaggccaagaacaga
gaccaccgtaaactgggacgggaacaagacttgtttttcttccatgatctcagccctgga
agctgcttcttcctcccaaagggagcctacatctacaacacactggtggagtttataagg
agtgaatacaggaagaggggcttccaggaagtggtcactccaaacgtctacaacagcaaa
ctctggcagacttcaggccactggcagcactacagtgagaacatgttctcctttgaggtg
gagaaagagacctttgctcttaaacccatgaactgtcctggacattgtctgatgttcgat
catcggccccgttcctggagggaactgccactgcgtctggctgattttggcgttctccac
cgcaacgagctctccggagctctgaccggacttacccgtgtccgccgcttccagcaggac
gacgcgcacatcttctgcgctatggaccagattgaatcagagattaaaggttgtctggag
ttcctgcgtgcagtgtatgaggtcttcggcttcaccttcaaactgaacctctcaaccaga
ccagagaagttcctcggggagccagaagtttgggagcaggctgagaagcaactagaaaac
agtctaaatgagtttggggagaagtggatattaaaccctggagatggtgctttctacgga
ccaaagattgacattcagatcaaggatgccattggaagataccaccagtgtgccaccatc
cagcttgacttccagcttcccatccgcttcaatctaactttcgtcagccatgatggagat
gataagaagaggccagtgattattcacagagctattttgggctcggttgagaggatgatt
gccatcttgacggagaactatggtggcaaatggcctttgtggctttctccaagtcaggtg
atggttgtgcctgttggaccgacctgtgaggattatgcccaaagggtgcaaaaagagttt
cacaatgcaggcttgatgactgatgtagatctggatcaaggctgcactctgaacaagaag
atcagaaatgcacagttggctcagtataactttattttagtggtgggagagaaggagaag
agcagcgacacagtaaatgtgcggacgagagataacaaggttcacggggaaagaagtctg
accgactgcatggagcgcttgagacaactgaaggcttcaagaacccgcaatgctgaagag
gaattttaa
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