Silurus meridionalis (southern catfish): 124380757
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Entry
124380757 CDS
T08004
Symbol
prdm12b
Name
(RefSeq) PR domain zinc finger protein 12b
KO
K24255
PR domain zinc finger protein 12 [EC:2.1.1.-]
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smeo03036
]
124380757 (prdm12b)
Chromosome and associated proteins [BR:
smeo03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
124380757 (prdm12b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_4
zf-met
zf-C2H2_2
zf-C2H2_jaz
zf-C2H2_15
zf-C2H2_7th_ZNF462
zf-C2H2_6
CBM_3
Zn_ribbon_Elf1
Motif
Other DBs
NCBI-GeneID:
124380757
NCBI-ProteinID:
XP_046697953
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Position
27:complement(5185527..5189215)
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AA seq
369 aa
AA seq
DB search
MGSVLPAEALALKAGFKPHTLALSDIITSDILHSFLYGRWRNALGEHLFEEKSSAAGPKT
AFTAEVLAQSFSGEVQKLSSLVLPSEVIIAQSSIPGEGLGIFSKTWIKAGTEMGPFTGRV
IAPEHVDLFKNNNLMWEVFNEDGTVRYFIDASQEDHRSWMTYIKCARNEQEQNLEVVQIG
SSIFYKAVETIPPDQELLVWYGNSHNTFLGIPGVPGIDEEHQKKHKNDDFHVCDTSSSVT
SLGTVGRMRCVICHRGFNSRSNLRSHMRIHTLDKPFVCRFCNRRFSQSSTLRNHVRLHTG
ERPYKCHVCQSAYSQLAGLRAHQKSARHRPPSSGSVVGLQTPSPPPPPPQMAAVPHPASL
VHHIPTMVL
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgggttccgtgttgcctgctgaagctctggccctgaaggctggatttaagccacacact
ttggctctgtcagacattatcacctcagacatcctgcacagtttcctgtacggacgttgg
aggaacgcgctcggggagcatctgttcgaggagaagagcagcgccgctggacccaaaacg
gccttcactgctgaggttcttgctcagtccttctccggagaggtgcaaaagctgtccagt
ctggtattacccagtgaggtgatcatcgcacagagctccatccctggtgaaggtctgggc
atcttctccaagacatggattaaagcaggcaccgagatgggacctttcacaggcagggtc
attgcacctgaacacgtagacctcttcaagaacaacaacctcatgtgggaggtttttaat
gaggacgggacagtgcgctacttcatcgatgccagccaagaagatcatcgtagctggatg
acttacatcaaatgtgctcggaatgagcaggagcagaacctggaggtggtgcagattgga
agcagcatattctacaaagcagtggagacaataccaccagatcaggaacttctggtatgg
tatggaaattcgcacaacacctttttgggcatccctggggtccctggcatagacgaggaa
catcagaaaaaacataaaaatgatgatttccacgtgtgcgacacctcgtcgtctgtcacg
tcccttggcacggtgggccgcatgcgctgcgtgatctgccaccgcggcttcaactcgcgc
agcaacctgcgctcgcacatgcgcatccacacgctcgacaagcccttcgtgtgccgcttc
tgcaaccgccggttcagtcagtcctccacgctgcgcaaccacgtgcgcctgcacaccggc
gagcgcccctacaaatgccacgtgtgccaaagcgcatactcgcagctggccggtctgcgt
gcgcaccagaaaagcgcaaggcaccgtccacccagttccgggtccgtggtggggttgcag
accccctccccacctcctcctcctcctcaaatggcagcggttcctcaccctgcctcgctg
gtgcaccacatccccactatggtgctttga
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