Silurus meridionalis (southern catfish): 124380758
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Entry
124380758 CDS
T08004
Symbol
dnm1b
Name
(RefSeq) LOW QUALITY PROTEIN: dynamin-1
KO
K01528
dynamin 1/3 [EC:
3.6.5.5
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04144
Endocytosis
smeo05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124380758 (dnm1b)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
124380758 (dnm1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124380758 (dnm1b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smeo04147
]
124380758 (dnm1b)
Enzymes [BR:
smeo01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.5 dynamin GTPase
124380758 (dnm1b)
Membrane trafficking [BR:
smeo04131
]
Endocytosis
Clathrin-mediated endocytosis
Dynamin
124380758 (dnm1b)
Lipid raft mediated endocytosis
Caveolin-mediated endocytosis
124380758 (dnm1b)
RhoA-dependent endocytosis
124380758 (dnm1b)
Exosome [BR:
smeo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
124380758 (dnm1b)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynamin_M
Dynamin_N
GED
PH
Ldh_1_N
DUF5130
Motif
Other DBs
NCBI-GeneID:
124380758
NCBI-ProteinID:
XP_046697954
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All DBs
Position
27:5271450..5308290
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AA seq
859 aa
AA seq
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MGNRGMEDLIPLVNRMQDAFSAIGQNANLDLPQIAVVGGQSAGKXSVLENFVGKDFLPRG
SGIVTRRPLVLQLINSPTEYAEFLHCKXKKFTDFEEVRQEIEAETDRITGQNKGISPVPI
NLRVNSPNVLNLTLVDLPGMTKVPVGDQPADIEFQIKEMLMQFVTKDNCLLLAVSPANSD
LANSDALKIAKEVDPQGVRTIGVITKLDLMDEGTDAREILENKLLPLRRGYIGVVNRSQK
DIDGKKDITAAMAAERKFFLSHPSYRHLADRMGTPYLQKVLNQQLTNHIRDTLPGLRNKL
QSQLLSIEKEVEEYKNFRPDDPSRKTKALLQMVQQFAVDFEKCIEGSGDQIDTYELSGGA
RINRIFHERFPFELVKMEFDEKELRKEISYAIKNIHGIRTGLFTPDMAFETIVKRQIAKI
KEPCQKCVDLVISELVNTVRQCTKKLAQYPMLREEMERIVTQHIRDRESRTKDQVMLLID
IELAYMNTNHEDFIGFANAQQRSSQMSKKKAAGNQDEIMVIRKGWLTINNIGIMKGGAKE
YWFVLTAETLSWYKDDEEKEKKYMLPVDNLKLRDIEKSFMSSKHVFALFNTEQRNVYKDY
RQLELACETQEEVDSWKASYLRAGVYPERIVDKEKQSESSEESSSDSFMHSMDPQLERQV
ETIRNLVDSYMAIVNKTVRDLMPKTIMHLMIINTKEFIHADLLAQLYSCGDQNTLMEESA
EQAQHRDEMLRMYHALKEALSIIGDISTTTVSTSMPPPVDDSWLQVQGGPSGRRSPMSSP
TPQRRAPPGPPRPGARAAPGPPAAGAPPVPSRPGASPDPHGGPPPQVPSRPNRVPPGVPS
RPSKGSPSHGESPHPSFDS
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atggggaatcgggggatggaggatctgataccgctggttaaccggatgcaggatgcgttt
tctgccatcggacaaaatgccaacctggaccttccccagatagccgtggttggcggtcag
agcgctggaaaangctctgtcctggagaacttcgtggggaaggattttctgccccggggc
tctggcattgtgactcgtcgccccctcgtgttgcagctgattaacagtccaacagaatat
gcagagtttctccactgcaaanggaaaaagttcactgattttgaagaagtgcgtcaggag
atcgaagcagaaacagaccgcatcactggacagaacaaaggcatctctccagttcccatc
aacctgagagtcaactcccctaatgtactgaatctaacactggtggacttgcccggaatg
accaaagtgccagtgggagatcagccagctgacattgagttccagatcaaagaaatgctc
atgcaatttgttacgaaggataactgcctcctgttggccgtctcacctgccaactcagat
cttgccaactcagatgctcttaagattgccaaggaagtggaccctcaaggtgtgagaacg
attggtgttatcactaaactggacctgatggatgagggtacagatgcacgagaaatcttg
gaaaacaagcttcttcctttgcgtagaggttacattggggtggtaaaccgcagtcaaaaa
gacattgacggaaaaaaggacatcactgctgcaatggctgctgagaggaagttcttcctc
agccacccttcctatcgtcacctggctgaccgcatggggacgccttaccttcaaaaagtc
ctcaaccagcaactgaccaatcatattcgagatacactgccagggttgaggaacaagctg
caaagccagctgttgtccattgagaaggaagtggaagagtacaagaacttccgcccggac
gacccttcccgcaagaccaaagctcttcttcaaatggtccagcagtttgcagtagatttt
gagaagtgtattgagggatctggtgatcagatcgacacgtatgagctgtcaggcggagcc
aggatcaaccgtatctttcatgagcgtttcccctttgaactggtcaagatggaatttgat
gagaaagagttgcgtaaggagatcagctatgctatcaaaaacatccatggtatcaggact
ggcctcttcactcctgatatggcttttgagacgatcgtgaaaagacagatagctaagatt
aaagagccgtgtcagaaatgtgtggacctggtcatctctgagctcgtcaatacagtcaga
cagtgcacaaagaagcttgctcaatacccaatgttgagggaggaaatggagaggattgtc
acccagcacatccgtgacagagagagtcgcacaaaagaccaggtgatgctgctgatagac
attgagctggcctacatgaacaccaaccatgaagattttatcggttttgctaatgcacaa
caacgtagcagtcagatgagtaaaaagaaggctgcaggaaatcaggatgagataatggtg
atcagaaagggctggctaaccatcaataacattggcatcatgaagggaggagcgaaagag
tactggtttgtcctcactgctgaaactctgtcctggtacaaagatgatgaggagaaagag
aagaaatacatgctgcctgtggataacctaaaactccgagacatcgagaaaagtttcatg
tctagcaaacacgtctttgccctcttcaacacagaacaaaggaatgtgtataaggattac
aggcagctagaactggcatgtgagacacaagaagaggtggacagctggaaggcctcatac
ctgcgtgctggcgtttacccagaacgcattgtggacaaagaaaagcagagtgaaagcagt
gaggagagcagctcggacagtttcatgcactccatggaccctcagctggagaggcaggtg
gagaccatccgcaaccttgttgactcctacatggctattgtcaacaagactgtgcgtgat
ctgatgcccaagaccatcatgcatcttatgatcatcaatactaaagagttcatccatgct
gatttgctggctcagctctattcatgtggagaccagaacactttgatggaggaatcggct
gaacaggcgcagcacagagatgagatgctgcgcatgtaccatgcactcaaagaagccctg
agcattatcggggacatcagtactacaactgtgtccacatccatgccaccaccagtggac
gactcatggctacaggtgcaaggaggaccttcaggaagaagatccccaatgtccagcccc
acacctcagcgccgagctcctcctggacctcctcgcccaggagctcgtgctgctcctggg
cctccggctgctggagctccacctgtcccctccagacctggagcctctccagacccccat
ggtggcccaccaccccaagtgccctcacgccccaaccgtgttcctccaggagttcccagc
cgtccaagcaaaggcagcccttctcatggggagagccctcatccttcgtttgactcgtag
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