Silurus meridionalis (southern catfish): 124380764
Help
Entry
124380764 CDS
T08004
Symbol
kntc1
Name
(RefSeq) kinetochore-associated protein 1 isoform X1
KO
K11577
kinetochore-associated protein 1
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smeo03036
]
124380764 (kntc1)
Chromosome and associated proteins [BR:
smeo03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
RZZ complex
124380764 (kntc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rod_C
KNTC1_N
ARM_KNTC1_3rd
ARM_KNTC1_1st
ARM_KNTC1_2nd
TPR_14
TPR_19
Beta-prop_EML_2
Motif
Other DBs
NCBI-GeneID:
124380764
NCBI-ProteinID:
XP_046697962
LinkDB
All DBs
Position
27:complement(15169930..15216816)
Genome browser
AA seq
2240 aa
AA seq
DB search
MCPGSLLFKRQAPVSDRRSLQDLDTGTVRLCGEQEPGSALYQVDTPVRISASEKLPDNSR
IYAFNNANCCVVVADRTVILFDPSFQTVLHHLYFDTLVDVVSVCPQGQFLFVGERNGNLH
IIHVPLKKTILSKVLQQPPSNDHETTYKSLLLHEAQNSPGSYHLFVLVRYGFLHVSNLAL
DKTQKAIEKMDLSALNEIQGNIHMNFCSTKEISNESCISAALAGFGKEVHLLIGAHGENT
ISQWRMEFDQRTLSLSNVLDSTLMPGVRKVQAVDNLMYVLNEEDMLSLWDTRSLVMLSCW
PDLHILDFLLIAEGDSASIGTQEGTCTKIMTLTAAETKPHLRKLLVQSLPSMEVLYSLEV
SAVSSLVQNAISVDAIYLLEAISDQSASSSEGSALGLVLRCFSEALPENRLNRLLYKHKF
EEAEKFAIAFELDVELVYKVKLDFVMEKLALVSLNDQADEVGTKLVEEAKTNLMKIMDEQ
YVVQYCLNAFWPTLTTAEEMLNYAASRFPSSQIQSALGKLATFCSLYGSDKFNGVSWIEF
LNSRDYLKEILAFLRMGNLSKAQYLWLRHEAEFAGEFGEKSMQALLSSISSDIPSLELCI
WLRGVVVPFMWRVLPKGQRILAKWLELRARDLELTEKHGWPQNGLMLAELGLPSFWMSTN
LVEDYNTEEVEHLKSLVANLHQLCDLYTKYNCRLSLSDFEMGSTRSMAFLMLDKVLAPEL
IAGVVESSVSPYALEHRLDLDRVLLDYIKDLLDCCSSQTTSLFTEWEAKAVALVHCMIDI
DLVMDAVLEIMYKAVVPWNDTIEKLVQQHLEKEHPKQELLKESYRLMEMKKLLRCYGIRN
LTLSNTRETMMLVRHIMKQDLATSLEDSLKLAETYKLNSSEIYYIYCIQLLEKNERDKCI
AGLKKLPPAEAELVIERLTSWAKLQLQNKEQINELKKLQMHVAQTMVEALKYLQNIQRDD
ALKRMGCENNLKMFTAIAHLQEDFDIFLTPEEYDDPAVRRQFNQQLITAYENTRAWRHSK
KKHPDKTSAKEPDVKAKAAVANDPDGKTRTLSTEAGLHRLARHLERTEQELWADLADRAL
EAGNVEKALKILSELYQHHPNSSTGRVLFSTARRLCQMLEDNVPMVLPERVNLPALIHKL
ACQAITICHADLLLDCVELCKSTRDAADVYRQCQIDDYGFVVKDAVLNGEEDAYTETSVQ
EVFNEDGIVLDPVSVLPVQYKITASLLPLADSTFYPLGCSCLSYCALQEDTDYVRPLLGP
MATMLQSLQECSQLELALRLLQESYGSILQHFVSNNMDLSLSMKLHPNSRLVRDKQTLEA
IEKTALSSINMVVVSLLHKVLNWRVVDCDLAIGFCTVLGKSDVLDILWKIITNAWQNYDK
IMAVAMVGAHLCSLYNDQQEKKNFLSVITDAEWGIKLGKFGISIQSVFRQCSESKRNLIP
VLVKNRNMTPEILKNYCRTYGLDSDSALNLYITTLLLQEKADHKQCEVGAGDSVLDEGDE
HAEVGHEDVLEHVLRIVPQLSSTADLVISLHTALTKLSPYNYERIERVLKTIQSAEESTT
VLPLNQMMGLLQHLKSHKRTSPPTDVESTYLLENSMESTPLANTRLPFHLLLQTNLYFWK
IISPELNEETLPTILLISKLMKVNLDKLYILTVNHVFKNKLMPLLLDQMKRSQAHGPSRD
TNAVIQNIFRHTVCIQNLELAAATVHKIAQDVPAGSEKTMFLKFSLDLVHKLLKSDTLQE
ELRTRGEMFTSKLQLQYQRSATENALMTFQLDCPELLKLTGLPGRLIVALFEHSSVVERM
KSPAGKTYPDIHAVAAEIASINCVDLLKIRNILLEKWLCKTGQTNGKDVQYQDSVTDLND
DPDLMRVVYLLQMHPMDMRARLLSPILSAETWLLGGSGLRLTFEHRSRALLCLIHIADSE
TLEALSHTPRDKVKYYLKCYMYLSQLEALNIPYNLERFLSSPKEGMIKGLWKNHSNEPQA
VRLVADLCLEYEVYDTQLWSGVLQKLLAFNMISYLQKILETLRAVPSLLELPNFSRTWRS
VILAPFITASLPLSPVQQATFYKTFVLLLKCPFLLNLDLVGIAKRFAQFNLVAFSLGTLL
LIPCSRKREQQIQTLLLSCNPTTILDQLVESMGTGELAGFPSQIRDTVLTFLFKSGRYQS
LITSEHFRPLLKHLVLKAQRDQVEEMINYLNNHNRKGDAISLAQEYVRFSELKGGERGAE
SPAGSDPIKEFLAQTMDSRG
NT seq
6723 nt
NT seq
+upstream
nt +downstream
nt
atgtgtcctggaagtcttctctttaaacgtcaagcaccagtgtcagatcggcgaagtctt
caggatctggacacgggcacggtgcggctgtgcggcgagcaggagcccgggagcgccctg
tatcaggtggacactccggtcaggatctccgcctcagaaaagttgcctgataactccagg
atctacgccttcaataatgcgaattgctgcgttgtcgtggccgatcgcaccgtgatcctc
tttgaccccagtttccagactgttctgcatcacctgtattttgatacattagtggacgtt
gtgagcgtttgtcctcagggacagtttttgttcgtcggtgagagaaacggcaatctccac
attatacatgttcctctgaagaagaccatcctgagtaaagtgctacagcaacctccatcg
aacgatcacgaaacgacctacaagagcctactacttcacgaagcacagaactctccaggg
tcataccatctttttgtcctcgtccgctatggattcttgcacgtctccaatctcgcactg
gacaaaacacagaaagcgattgaaaaaatggacctcagtgccttaaacgagatccaaggt
aacattcacatgaacttctgctccactaaggagatcagtaacgagagctgtatctccgct
gcgctggccggcttcggaaaggaggtccacctcctgattggggcccacggtgaaaatact
atttcccaatggcgcatggagttcgatcagaggacgctgtcgctctccaatgttctggat
tcaacattaatgccaggcgtgcggaaagttcaggcggtggacaatttgatgtatgtgctc
aacgaagaggacatgctgagtttgtgggacactcggtcgctggtcatgctgtcctgctgg
cccgatctccacatcctcgacttcctcctgatcgcagaaggagactcagcgtccatcggg
acgcaagagggaacctgcacgaagatcatgactttaactgcagccgagactaagcctcat
ctgaggaagctcctggttcaatcccttccttctatggaggttctctactcgctcgaggtc
tcggccgtgtcgtcgctggtgcagaacgccatcagtgtggatgccatctatttgctggaa
gcgatttccgatcagtcagcaagcagttctgagggatcagccttgggtttagtcctgaga
tgcttctccgaggctcttcctgagaacagattgaatagacttctctacaagcacaagttt
gaagaagcggagaagttcgcgatcgccttcgagcttgatgttgagctggtgtataaggtg
aagttggacttcgtgatggagaaactggctttagtgtccctcaacgatcaagctgatgaa
gtgggaacaaagcttgttgaagaagccaaaaccaacctgatgaagattatggatgagcag
tatgtggtgcagtactgcctgaatgctttctggcccacactcactactgctgaggagatg
ctgaactacgccgccagtcgcttcccgtcatcccaaatccagtcagctctgggcaaactc
gccaccttctgcagcctctacggttccgacaaatttaatggcgtgtcctggatcgagttc
ctgaacagcagagattacctgaaagagatactcgcatttctaagaatggggaacctcagc
aaggcgcagtacctgtggctcagacatgaggctgagtttgcaggagagttcggtgagaaa
tccatgcaggcgttgttgagctccatctcatcagacatcccgtctctggagctgtgtatc
tggttgaggggggtggtggtgcccttcatgtggagagtgttacctaaaggccagagaatc
ctggccaaatggttggagctgcgagcgagagatctggagctaacggagaagcacggctgg
cctcagaacggtctgatgctcgctgaactcggactgccatccttctggatgtccacaaat
ctggttgaggactataacacagaagaggtggagcatctaaagtcattagtggcaaatcta
caccaactctgtgacctgtacaccaaatacaactgtcgcctctcactgtctgacttcgag
atgggaagcactcgcagcatggcgtttctcatgctggataaagtgctcgccccggagctg
attgcaggggtggttgagagcagcgtgagtccgtacgccctggagcacagactggacctc
gatcgcgtcctgctagactacattaaggacttgctggattgctgcagttctcagactacg
tctctgttcactgagtgggaggccaaagcagtggctctggttcactgtatgattgacatt
gatctggtgatggacgccgtcctcgagatcatgtacaaggccgtggtcccctggaacgat
acgatcgagaagctcgttcagcagcatctggaaaaagagcaccccaagcaggagctcctg
aaagagagttatcgtttaatggagatgaagaaactcctgcgatgttacggaattcgcaac
ttgacactgtcaaacaccagagagacgatgatgcttgtgagacacatcatgaaacaggac
ctggccacatccctagaagattctcttaaactggctgaaacctataagctcaactcgtct
gagatctactacatctactgcattcagcttttagaaaagaacgagagagataaatgtata
gctggactgaaaaagctgccccctgctgaggctgaactcgtgattgagcgactgaccagc
tgggcgaaactccaactgcaaaacaaggagcagatcaatgagctaaagaagctccagatg
cacgtcgcccagacgatggtagaggcgctgaagtatttgcagaacattcagagagatgat
gctttaaagagaatgggatgcgagaacaatctgaaaatgttcactgctattgctcacttg
caggaggacttcgacatcttcctgacccctgaggagtacgatgacccggcagtgaggcgg
cagttcaaccagcagctgatcaccgcctacgagaacacgcgagcgtggcgccattcgaag
aagaagcacccggacaagacgagcgccaaagaaccggacgtcaaggccaaagcggcagtg
gctaatgatcctgacgggaaaacgaggacgctgtccactgaggccggactccatcgtctg
gccagacatctggagaggactgagcaggagctgtgggcagacctggcagatcgagcttta
gaagctgggaatgtggagaaagcccttaaaatcctcagtgaactgtaccagcaccatccg
aactcgagcacaggccgagtgctgttcagcacggctcggcgtctctgtcagatgctggag
gacaacgtccccatggtgctccccgaaagagtcaatctcccagccctcatccacaaactg
gcctgtcaggccatcaccatctgccatgccgacctgctgcttgactgtgtggaactgtgt
aaaagcaccagagacgctgctgatgtgtaccgtcagtgtcagattgatgactacggcttc
gtagtgaaggatgcagtgctgaacggtgaggaagatgcctatacggagaccagcgttcag
gaggtgtttaacgaggacggcatcgtgctggacccggtctcggtgctcccggtgcagtat
aagatcaccgccagtctcctgccactcgcagattcaacgttttatcctctgggttgctcg
tgcttgtcgtattgtgctctgcaggaagacactgactacgttcggccgttgctcgggcca
atggccaccatgctgcagagtctgcaggagtgcagtcagctagaactggccctaaggctg
ctacaggagtcatacggcagcattttacagcacttcgtctccaacaacatggacctcagt
ttgagcatgaagcttcatcccaacagtcggttagtacgagataagcagactctggaggcg
attgaaaagactgctttgtcttctatcaacatggttgtggtgtctttgctgcataaggtg
ttgaactggcgggtggtcgactgtgacttggccattggtttttgcacggttttgggcaaa
tctgacgttttggacattctgtggaaaataatcaccaatgcttggcaaaattatgacaag
atcatggctgtggcgatggttggagcccatttatgctcactttataacgaccagcaggag
aagaagaacttcctgtctgtcatcacagatgcagagtggggtattaagcttggaaaattt
ggaatttccattcagtcagtgtttagacagtgttcagagagcaagcggaatctgattcct
gtacttgtcaagaacagaaacatgacccctgagatcttaaagaattactgcagaacctat
gggctggacagtgactctgcgcttaacctctacatcaccacgctgctgctgcaggagaaa
gcagatcataagcagtgtgaagtcggagcaggggattcagtactggacgaaggggatgaa
cacgcagaagtagggcatgaagatgttctggaacatgtcctacgcattgttcctcaactg
agctccactgcagacctggttatcagtctgcacactgcactcaccaagctgagtccatac
aactacgagcgaattgagagggtcctcaagaccattcagtccgcagaggagagcaccact
gttttaccactcaaccagatgatgggattgctccagcatctgaagtcccacaagcgtacg
tctcctcccactgatgtcgagagcacgtaccttctggagaactcaatggagtcgactcct
ctggccaacactcgcttgccgtttcaccttcttctccagaccaacctctatttctggaag
attatttcacccgaactgaatgaggagacattacccacgatactgctcatatccaaactc
atgaaggttaacctggataagctttacattctgaccgtgaatcatgtgttcaagaacaag
ctgatgcctttgctgcttgaccagatgaagcgctcacaggctcatggccccagcagagac
accaacgccgtgatccagaacatattcagacacacagtctgcattcagaacctggaacta
gctgcagccaccgtgcacaaaattgctcaggatgttcctgcaggttcagagaaaaccatg
tttctgaaattcagcttggaccttgtacacaaattgctaaagtctgacactctacaggag
gagctacggacgaggggggagatgttcacctcgaagctgcagctgcagtaccagcgctca
gccacagagaacgcgctcatgactttccagctggactgccccgagctactgaaactcaca
ggacttcccggtcgtctcatcgtggccctgtttgagcacagctcagtggtggagcgcatg
aagagtcctgctggaaagacctaccctgacatccacgcagttgctgcagagatcgcgtcc
attaactgcgttgaccttctcaagatccgtaacatccttttagagaagtggctttgcaaa
acagggcagacgaatggcaaggacgtccagtaccaggactctgtgactgatctaaatgat
gatcctgatctgatgagagtggtgtatttgctgcagatgcatcctatggatatgagggct
cgtctgctcagtcccatcctgagtgcagaaacatggctgttgggaggatcgggtctcaga
ctgacctttgagcaccgcagtcgtgctctgctctgcctcattcacatcgccgactccgag
acattagaggctctgtctcacacccctagagataaagtcaagtattacctgaaatgctac
atgtacctctctcagctggaggcactcaacattccctacaatctggagcggtttctcagt
agtccaaaagagggaatgattaagggtttatggaagaaccacagcaacgaacctcaggct
gttcgtctagtagcagatttgtgtttggagtacgaggtgtatgacacacagctgtggagc
ggcgtgctgcagaaactgctggcgtttaacatgatcagctacttgcagaagattctggaa
actcttcgtgccgtgcccagtcttttagagctcccaaatttctccagaacctggcgcagc
gtgattctggccccttttatcacggcatctcttcctttgagtccagttcaacaagccacg
ttctataagacgtttgttcttctactaaaatgtccgttcctgttgaatctggatctcgtc
ggcatcgccaagcgcttcgcccagttcaacttggtggccttctcgctcggcacgctctta
ctcatcccctgctccagaaagagggaacagcaaatccagactctactgttatcctgtaat
ccgacgaccatcctggatcagctggtggagagtatgggcacaggagaactcgcaggcttt
ccttctcagatcagggacactgtgctgacgttcctcttcaaaagtggacgctaccagagc
ctgataacgagcgagcactttcgaccgctcctgaagcacttggtgttgaaggctcagcgt
gatcaggtggaagagatgatcaactacctgaacaatcacaacaggaagggagatgccatt
agtctcgctcaggaatacgtgaggttcagcgagctgaaaggtggcgaaaggggagcagaa
agtcctgctggttctgaccccattaaggaatttttggcgcaaacaatggactctcgaggt
tga
DBGET
integrated database retrieval system
