Silurus meridionalis (southern catfish): 124380774
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Entry
124380774 CDS
T08004
Symbol
barhl1a
Name
(RefSeq) barH-like homeobox 1a
KO
K09360
BarH-like
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeo03000
]
124380774 (barhl1a)
Transcription factors [BR:
smeo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
124380774 (barhl1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
DUF7645
Homeobox_KN
SatRNA_48
Motif
Other DBs
NCBI-GeneID:
124380774
NCBI-ProteinID:
XP_046697987
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Position
27:complement(14215842..14219430)
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AA seq
299 aa
AA seq
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MEVPTNGSSFGIDSLLSHRPPSPRVSTARTLTGDCRSPASSTRSEIDSDCSSPPSPRRDS
EPGSPLVMSQPRTVTSSFLIRDILADCRPLAACAPYTNSADSARETEDYTDRLHSNSSSD
SEYRAKDEPEREISSSRESPSSRLKKPRKARTAFTDHQLAQLERSFERQKYLSVQDRMEL
AASLNLTDTQVKTWYQNRRTKWKRQTAVGLELLAEAGNYSALQRMFPSPYFYPQSLVSGL
DPAAGLYLYRGPTAVPPALQRPLVPRVLLQGGAETQLSPHLSTHMSPLSASLPRPTPQR
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggaagtgccaacaaacggctcaagttttgggatcgattctttgctatcgcacagaccg
ccgagtccgcgagtctccacagcgcgcactttaacgggagactgccgctcaccggcgtcc
agcacgcgctcagagatagacagtgactgctcttctccaccgtccccaagacgagactct
gagcccgggtctccgttagtgatgtctcagccgagaacagtgacctcctcttttttaatc
cgggacattctggcggactgcaggccgctcgccgcgtgcgcaccttacaccaacagcgca
gactcagcgcgcgagaccgaggactacaccgacagactgcacagcaactcatcatcagac
agtgaataccgggctaaagatgaacccgaaagggaaatctccagcagcagagagagtccg
tcctcacgcctgaagaagccccggaaagcacgcacggccttcacagaccaccagctcgcg
cagctcgagcgcagctttgagcgtcagaagtatctgagcgtgcaggaccgcatggagctc
gcggcgtctctcaacctcacagacacgcaggtcaagacgtggtatcagaaccgcaggaca
aagtggaagcgacagacggcagtcggtttggagctgcttgccgaagcaggaaactattct
gctcttcagaggatgttcccgtcgccatatttctacccacagagcctggtgtctggtctg
gaccctgcagcgggactgtatttatacagaggacccacagcggtacctccggcactgcag
aggcccctcgtacccagagttctgctgcagggtggagctgagacccaactgtccccgcat
ctgtccacgcacatgtccccgctctctgcctccttaccgagacccacaccgcagcggtga
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