Silurus meridionalis (southern catfish): 124380797
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Entry
124380797 CDS
T08004
Symbol
rasgrf2b
Name
(RefSeq) ras-specific guanine nucleotide-releasing factor 2 isoform X1
KO
K12326
Ras-specific guanine nucleotide-releasing factor 2
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
124380797 (rasgrf2b)
SSDB
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Paralog
GFIT
Motif
Pfam:
RasGEF
RhoGEF
PH
RasGEF_N
SOS1_NGEF_PH
Par-4_C
IQ
DUF2443
Motif
Other DBs
NCBI-GeneID:
124380797
NCBI-ProteinID:
XP_046698012
LinkDB
All DBs
Position
27:6948606..7008003
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AA seq
1282 aa
AA seq
DB search
MQKSVRYNEGHALYLSVVARKEGTKRGYLCKKTTENSKWHEKFFALYQNVLFYFDSEQSA
RPSGIYLLEGCTCERVPAPKVSTGGKETLDKQHYFLIVFGHDGQKPLELRAEEETECDEW
VETIQQASYSDIIIEREVLMQKYIHLVQIVETEKVAANQLRTQLEDQDTEIERLKAEIVA
LNKTKERMRPYQVNQEEDDPDIKKIKKVQSFMRGWLCRRKWKIIVQDYICSPHAESMRKR
NQIVFNMVEAETEYVHQLSILVNCFLRPLRMAASSKKPPISHDDVSSIFLNSETIMFLHE
IFHQGLKARIANWPTLVLADLFDILLPMLNIYQEFVRNHQYSLQVLANCKQNRDFDKLLK
QYESNAACEGRMLETFLTYPMFQIPRYIITLHELLAHTPHEHVERKSLEFAKSKLEELSR
VMHDEVSDTENIRKNLAIERMIVEGCDILLDTSQTFVRQGSLIQLPSVERGKLSKVRLGS
LSLKKEGDRQCFLFTKHFLICTRSSGGKLHLLKQGGVLSLIECTLIEEPDANDEDAKTSG
QVFGHLDFKIVVEPADAPAFTVVLLAPSRQEKAAWTSDISQCIDNIRCNGLMTSVFEENS
KVTVPHMIKSDARLHKDDVDICFSKTLNSCKVPQIRYASVERLLERLTDLRFLSIDFLNT
FLHTYRIFTSAAVVMDKLADIYKKPFTSIPVRIQYPSFDRLSITSFCPDYSLKMRKIAMD
QSKSLELFFATNQNNRSSSTGSEHPNEKSPRLCRKFSSPPPLSIPSRTSSPVRARKLSLN
SPLSSRVAALDLSNPVSYSATNSPTSANPCTSPPPSNIKSPEDPSPEQSPGANDENADQP
RIDALSGKLRRSFRRVRCHPSSACFTSAVLESASMDKSIIPESPQGSEAGDLSPCRSPST
PRHMRFRGPGVPAAENSRCSVSPASAFAIATAAAGHSSPPVFNNSERMCDKEFIIRRAAT
NRVLNVLRHWVSKHSQDFELNRELKMSVMCLLEEVLRDPDLLPQERKATANILNALSQDD
LDDAQLKIEDILQMAEFPKAECFESLSAMEIAEQITLLDHIIFRSIPYEEFLGQGWMKMD
KNERTPYIMKTSQHFNDMSNLVASQIMSHTDVGSRSSSIEKWVAVADICRCLNNYNGVLE
ITSALNRSAIYRLKKTWAKISKQTRALMDKLQKTVSSEGRFKNLRETLKNCNPPCVPYLG
MYLTDLAFIEEGTPNFTEEGLVNFSKMRMISHIIREIRQFQQTPYRIEHQPKVTQYLMDK
TLIMDEDTLYDLSLKIEPRLPA
NT seq
3849 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagagcgttcgctacaatgaaggacacgctctgtatctgtccgtggtggcgcgt
aaagagggcaccaagcgcggctacctctgtaagaagacgacggaaaacagcaaatggcac
gagaagtttttcgccctctaccaaaacgtgctcttctacttcgactctgagcaaagtgca
cgaccctctggcatttatctcctggagggctgcacatgtgaacgcgtcccggcgcctaaa
gtgtccacaggaggcaaggagacactggataaacagcactatttcctcattgtgtttggc
cacgatggccagaagcccctggagctccgtgccgaagaggaaacagagtgtgatgaatgg
gtggagaccatccaacaagccagctattcagacattatcatcgagcgtgaagtgctcatg
cagaaatatatccacctggtgcagattgtggaaacggagaaggtggcagccaatcagctg
cgtacccagctggaggaccaggacaccgaaattgagagactcaaagcagagattgtagcc
ttgaacaaaactaaggaaaggatgcgcccttaccaagtaaaccaagaggaagatgatcca
gatatcaagaagattaaaaaggtccagagtttcatgcgaggctggctgtgccggagaaag
tggaagatcattgtccaggactacatttgctctcctcatgcagagagcatgagaaaaaga
aaccagattgtctttaacatggtagaggctgagactgagtatgtccatcagctgtccatc
ttggttaactgcttcctcaggcctctccgtatggctgctagctcgaaaaaacctccaatt
agccatgatgatgtcagcagcatcttcctcaacagtgaaacaattatgtttttgcacgag
atattccaccaaggcttgaaagcacggatagcaaactggcccacattggttttagccgat
ctcttcgacattttgctgcctatgctgaatatctaccaggagtttgtgcgaaaccaccag
tacagcctgcaggttttggcgaactgtaagcagaacagggattttgacaagctcctgaaa
caatatgagtctaatgctgcgtgtgagggaaggatgctcgaaaccttcctcacataccct
atgtttcagattccacgctatattataactctacatgaactcttggctcacacaccacat
gagcatgtagagcggaagagtctggagtttgccaagtcgaagcttgaagagctgtccaga
gtgatgcacgatgaggtgagtgacactgagaacatccgcaagaaccttgctatcgagcgc
atgattgtggaaggttgtgacatcctcctcgacaccagtcagacatttgtgagacaagga
tctttgatccaactaccttcagtggagagggggaagctcagcaaagttcgactaggttct
ctctccctgaagaaagaaggagacaggcagtgctttctgttcaccaagcatttcctcatc
tgtacccgtagctcaggaggcaagctgcacctgctcaaacaaggtggcgttctgtccctg
atcgagtgcacgctgatcgaggaacccgacgccaatgatgaagacgctaagacctcaggg
caggtgtttggccatttggactttaagattgtggtggaacctgcagatgctcctgcattt
acagtggtacttctggctccatcacgccaggagaaagcagcctggaccagtgacatcagc
cagtgtattgataacatccgctgtaacggcctgatgaccagtgtgtttgaagagaactcc
aaagtcactgtgccacacatgataaaatctgatgcacgtctccataaagacgatgttgac
atttgcttcagcaagacgctcaactcctgcaaggttccccagatccgctacgccagcgtg
gagcggctgctggagaggctgacagacctgcgcttcctatctatcgacttccttaacacc
ttcctgcacacgtatcgcatctttacctctgctgctgtggtcatggacaagctggctgac
atctataagaagcccttcacctccatacctgtcaggatccagtatccctcatttgatcgt
ttgtccatcacatccttctgtcctgattacagcttgaagatgaggaagatagccatggac
caatcaaagtccctggagcttttcttcgctaccaaccagaacaaccgttcaagcagcaca
ggcagtgagcatcccaatgagaaatctcctcgcctgtgcaggaagttttcctcccctcct
cctctctcgatcccctcacgcacttcctctccagtgcgagctcgtaagctctccctcaac
tctccgcttagctccagggtggctgcactggacttgtccaaccccgtgtcctactccgcc
actaacagccccacctcagctaacccctgcacctcgcctcctccttccaacatcaagtct
cctgaggatccttcacctgagcaaagccctggtgccaatgatgagaatgcagaccaacca
cgcatcgacgcgctctctggaaaactgcgccgtagctttcggagggtcagatgtcaccct
tcaagtgcatgctttacatcagctgttctagaatcagcctcaatggataagtccattatc
cctgagtcccctcaaggcagtgaagctggagatctctccccctgcagatcgccttctaca
ccacgacacatgcgcttcagaggtcctggagtcccagcagcagagaactcccgttgttca
gtgtctcctgcttcagcctttgctattgcaacagctgctgctggccacagcagccctcca
gtttttaacaactcggagagaatgtgtgacaaagagttcatcatccggagagcagccact
aaccgggttctgaatgtcctacgccactgggtttccaaacactcccaggactttgagctg
aatagagagttgaaaatgagtgtgatgtgtcttctggaagaggtgctgagagatcctgac
ctgctccctcaggaaaggaaagccactgcgaacatactcaatgccctttcacaagatgac
ctggatgatgctcagctgaagatagaggacattctacagatggctgaattcccaaaggca
gagtgctttgaatcactgtcagcaatggaaatagctgagcagatcacacttctagaccac
atcattttccgaagcatcccttatgaggagtttctgggccaaggctggatgaagatggac
aagaatgaaagaactccttacatcatgaagaccagccaacatttcaatgatatgagtaac
ctggtagcatcacagattatgagccacacagatgttggctcaaggtcaagctccatagag
aaatgggtagccgtggctgatatttgccgctgtctgaacaactataacggcgtcctggag
atcacctctgccctgaaccgcagtgccatctataggctgaaaaaaacctgggctaaaatc
agcaagcagacaagagcactcatggataagctccagaagactgtgtcatctgagggacga
tttaaaaacctgagggaaacattgaaaaactgtaatccaccatgtgtcccttatctgggc
atgtacctgacagacctggcgtttattgaggaaggaaccccaaactttactgaagaggga
ttggtcaacttctcaaagatgagaatgatatctcatattattcgtgagatcagacaattc
cagcaaactccttacagaatcgagcaccagccaaaggtcactcagtacctaatggataaa
actctgatcatggatgaagatacactctatgacttgtctcttaagatcgaacccaggctt
cctgcttga
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