Silurus meridionalis (southern catfish): 124380823
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Entry
124380823 CDS
T08004
Symbol
vps37ba
Name
(RefSeq) VPS37B subunit of ESCRT-I a isoform X1
KO
K12185
ESCRT-I complex subunit VPS37
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124380823 (vps37ba)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124380823 (vps37ba)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smeo04147
]
124380823 (vps37ba)
Membrane trafficking [BR:
smeo04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
124380823 (vps37ba)
Exosome [BR:
smeo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
124380823 (vps37ba)
Exosomal proteins of colorectal cancer cells
124380823 (vps37ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mod_r
Motif
Other DBs
NCBI-GeneID:
124380823
NCBI-ProteinID:
XP_046698046
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Position
27:complement(17165278..17174353)
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AA seq
268 aa
AA seq
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MARFGNKLSSYSIAQLSELLEDDEKLNQIVQDLEEVQEVQQNKETILASNRSLAEQNLKL
QPRLDHQKNELTKRYRCLQEQFEAFQLRKSTLDHMSGNTSLDTLLALLQAEGAKIEEETE
NMADTFLDGAVPLDGFIDEYQSKRKLAHLRRVKIEKLQELVLKSPTTVVQVARHPEIASA
PAPLQNEPDSAPAPQPRRAPPLPPIKNLSPQSQPAPVMVCPAAPYPPIPPRARQPQPAYP
SLCISQYPPPVPQRSAPRMAPQPGFILQ
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcttcggtaacaagctgagctcctactctatcgctcagctgtccgaactgctc
gaagacgacgagaagctcaaccaaatagttcaggaccttgaagaggtgcaggaggtgcaa
cagaataaggaaacgatcctggcaagcaaccggagcctggccgagcagaacctcaagctg
caacccagattagaccatcagaagaatgagctcacgaagcgctaccgctgcctgcaggaa
caattcgaggccttccaacttcgcaagtccacgctagaccacatgtctggcaacacatct
ttggatacattacttgcattgttgcaggcagaaggagccaaaatagaggaagaaacagag
aacatggctgacactttccttgatggcgctgtacccctggacggctttatcgatgagtac
cagagcaagcgcaaactggctcacctgcgaagggtgaagatcgagaagcttcaggaactg
gtgctgaaatcgccaacgacggttgtccaggtcgctcgtcaccccgaaatagcatccgca
cctgctcccctccagaatgagcccgatagtgccccagcaccacagcccagaagagcccct
ccgctaccccccatcaaaaatctcagccctcaatctcagccagctccagtaatggtctgc
cctgctgccccttacccaccaattccaccccgagcgagacaaccccaacccgcttaccct
tctctttgcatttcacagtaccccccaccagtgccacagagatctgcccctcggatggct
cctcaaccgggattcatcttgcagtga
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