Silurus meridionalis (southern catfish): 124380833
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Entry
124380833 CDS
T08004
Symbol
arrdc1a
Name
(RefSeq) arrestin domain-containing protein 1a
KO
K26228
arrestin domain-containing protein 1
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124380833 (arrdc1a)
Membrane trafficking [BR:
smeo04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
124380833 (arrdc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arrestin_C
Arrestin_N
Vps26
LDB19
Spo0M
Rgp1
Motif
Other DBs
NCBI-GeneID:
124380833
NCBI-ProteinID:
XP_046698059
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Position
27:complement(14020608..14040052)
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AA seq
458 aa
AA seq
DB search
MGKLQEFQITLKDNKVVYSPGESISGTVKISTAQPIQCKAIKVNCHGSCGVSNKVNDTDW
VEEEQYFNSSLTVADKGTLKQGEHIFPFKFLIPATAPTSFEGPYGKIMYKIRAFIDTPRF
SKDYKAEKPFYMLNNINLNEVPDIYELNSAKITKNFTYMLMKNGTVVLDAKTNQRGYTAG
EIIKVSTEIDNQSGKNTGHVVACLMQRVTYQTKKPTHELRTIAEVEGAGVKAGKQAAWKE
QIIVPPLPQSSLSGCNLIEISYYIQVSLKYPEILLTMPIHIGNIAVDPSLRPPPKVAKAS
KTAPTPAPRINPASPGSFNAPAASSPPSTSPSLPPRPVPRPRPRSMIVTPSAPPADPDMI
DAGNRQSEEIPTKLHSQQQGPMSPSAFSYAPGLVFPQCISNPSAHQFSLSTGATIPYFSE
GNGPPMPTSCPFILPPDYRSSAQPHDPPPAYEDSFLTT
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggggaagcttcaggaatttcagatcactctaaaagacaacaaagtggtttatagtcca
ggagagtcgatttccgggacggtgaaaatctccactgctcaacccatccagtgtaaagca
attaaggtgaactgccatggctcctgcggtgtgtccaacaaagtgaacgacacggactgg
gtcgaggaggagcagtacttcaatagctctctgactgtggctgataaaggcactctgaaa
cagggtgaacacattttcccttttaagttccttatacccgccacagctccaacatcattc
gaagggccatatggaaagattatgtacaaaatccgagcgttcatcgacacgcctcgcttc
tcaaaagactacaaagcagagaagcccttctacatgctgaacaacattaatcttaatgaa
gtgcctgacatctatgaactaaactctgcaaaaattactaagaatttcacatatatgctg
atgaagaatgggacagttgtcctggatgctaaaacgaatcagcgtggctatactgcaggg
gagatcattaaagtgtccacagagatcgacaaccaatcggggaagaacacaggccatgtg
gtggcttgtttaatgcagagagtgacttatcaaacgaaaaagccgactcatgaattaaga
acgatcgcggaggtggagggagctggagtgaaggcaggcaaacaggctgcgtggaaagaa
cagattatcgttcctcctcttccacagtcgtctctgtcagggtgtaatcttatcgagatc
agctattacatccaagtctctttgaagtatccggaaattttactgacgatgccaattcat
attgggaacattgcggttgatccaagtctccgtcctcctcctaaagtcgccaaagcctcc
aagacggctcccaccccagcaccacgaattaacccagcatctccaggttcattcaacgcc
cccgctgcctcttctccaccatccacctcccccagtctgcctcctcgccccgtcccccga
ccacgtcctcgcagcatgattgtcactccgagcgcgcccccagcagacccagacatgata
gatgctgggaatcgtcagagcgaagagattcctacaaagctccactctcagcaacagggc
cccatgtctcccagcgccttcagctatgccccgggccttgtgttcccccagtgtatcagc
aacccgtcagcgcatcagttctccctctccacaggggctaccatcccctacttctctgaa
ggaaacggcccacccatgcccacctcctgcccgttcatcctgcctccagattacagaagc
tcagcacaaccgcatgatcctccaccagcttatgaagatagctttctcaccacataa
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