Silurus meridionalis (southern catfish): 124380878
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Entry
124380878 CDS
T08004
Symbol
xbp1
Name
(RefSeq) LOW QUALITY PROTEIN: X-box-binding protein 1
KO
K09027
X box-binding protein 1
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
124380878 (xbp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeo03000
]
124380878 (xbp1)
04131 Membrane trafficking [BR:
smeo04131
]
124380878 (xbp1)
Transcription factors [BR:
smeo03000
]
Eukaryotic type
Basic leucine zipper (bZIP)
AP-1(-like) components, Jun
124380878 (xbp1)
Membrane trafficking [BR:
smeo04131
]
Autophagy
ER-phagy
ER stress-related proteins
124380878 (xbp1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bZIP_1
bZIP_2
bZIP_Maf
ATG14
YabA
GOLD_2
Motif
Other DBs
NCBI-GeneID:
124380878
NCBI-ProteinID:
XP_046698130
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All DBs
Position
27:complement(2791740..2795708)
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AA seq
367 aa
AA seq
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MVVVTAGPGGAHKVLLISSSHSGDSNSAALPLRKRQRLTHLSPEEKALRRKLKNRVAAQT
ARDRKKAKMGELEQQVLELEHENQKLHMENQMLRERTSDLMSENEELRQRLGLDTLVRKE
KVQVLESGKNDLVLLNGSSESAALRLRVSAAGAGPAIVKAEEFPMDSHVPSTSDSESDLL
LGILDIIEPELFLKEAPEQNHPEQFLLVGSTPGPLPTPSSGVVGATPVKLEALNELIQFD
HIYTKPVVDAVEEEEDDEEEEEEEVSSSSEDEEVEVEVETTSIKDEPEEMIIPVTESDSI
AVDDFLSEASSSFGGFDKTAYLMSDTYSDSGYERSPSPFSDISSPLCPDTCWEDMFANEL
FPQLISV
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atggtggtggtgacagcagggcccggaggagcccataaagtgcttcttatttcttcttca
cactccggcgactcgaacagcgctgctcttcctttacggaaaaggcagcgactcacacat
ctgagtcctgaggaaaaagcacttcggaggaagctgaagaacagagtcgcagcacagaca
gcaagagacagaaaaaaggccaaaatgggagaactggagcagcaagtcctggaactggag
catgaaaatcagaaactccacatggagaaccagatgttgagagaaagaacgagcgatctg
atgagcgagaacgaggagctgagacagagactggggttggacactctggtcagaaaagag
aaggtgcaggtgttggagtccggcaagaacgatttggttttgctgaacgggtcttctgag
tccgcagcactcaggctacgtgtgtccgcagcaggtgcaggcccagctatcgtcaaagct
gaagagttccccatggattctcacgttcctagcacttcagactctgagtctgatctcttg
cttggcattttggacatcattgaaccagagctgttcctcaaagaagctccagagcagaac
catcctgagcagttcctgctggtcggatcaacccctggtccgctacctaccccctcatct
ggagttgtgggggccacaccagttaagctggaggcccttaatgaactgatccagttcgac
cacatttacaccaaaccggtagtagatgcagtagaggaggaggaagatgatgaggaggag
gaggaggaggaagtctcatcgtcctctgaagacgaggaagtggaggtggaagtcgaaacg
acgtccatcaaagacgaacccgaggaaatgatcatccccgtgactgagagcgactcgatc
gcggtcgacgacttcctttccgaggcgtcctcgtccttcggaggcttcgacaagacggcg
tacctgatgtccgatacgtacagcgactctggatacgaaaggtcaccttcccctttcagc
gacatctcgtccccgctttgccccgacacctgctgggaagacatgtttgctaacgaactt
ttcccacaacttattagcgtctaa
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