Silurus meridionalis (southern catfish): 124381041
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Entry
124381041 CDS
T08004
Symbol
rab3gap1
Name
(RefSeq) rab3 GTPase-activating protein catalytic subunit isoform X1
KO
K18270
Rab3 GTPase-activating protein catalytic subunit
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124381041 (rab3gap1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smeo04147
]
124381041 (rab3gap1)
Membrane trafficking [BR:
smeo04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
124381041 (rab3gap1)
Exosome [BR:
smeo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
124381041 (rab3gap1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rab3-GAP_cat_C
Rab3-GTPase_cat
Motif
Other DBs
NCBI-GeneID:
124381041
NCBI-ProteinID:
XP_046698398
LinkDB
All DBs
Position
3:30041498..30086763
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AA seq
972 aa
AA seq
DB search
MAADSDPESEVFEITDFTTASEWERFVSRVEEVLNDWKLIGGNIGKPPEKGEYTTGTWEE
KSREINFADFKFSITHHYLKQDCVENEGKEDSEEDAFPLAMQDLLCMNNDFPPRAHCLVR
WYGVREFVVISPGANCEAIVSESKCNLLLSSVSIALGNTGCQVPLFVQIQQKWRKMYAGE
CQGPGVRTDFEMVHLRKVPSQYNHLSGLLDIFKAKIGCPLTPLPPTNIAIRFTYILQDWQ
QYSWPQQPPDFDALLAGEVGGVEFGKLPFGACEDPISELHLATTWPHLTEGIVVDNDVYS
DLDPLQAPHWSVRVRKADNPQCLLGDFLMEFLKLGSRKESTEEILGRSSAEEEGKDNSDI
TQALSKLTEPTAVPIPKLSVSNMVHSARKRISRHRRNDQSPLSNDVLNSILLYLFPDAAL
DKSDSSEAKAPHSNPGVKTDQDKDTEDHNLFSVLKSAPWDCLTYRLALCVCLVNFYHGGV
RAVAHLWQEFVLEMRYRWENNHLIYGLPAGPPDLRCCLLHQKLQMLNCCIEHKKVRDELR
KDVSSDNGLPVPQVSPGKSCDSWSDSEDEFFECLSDAEDMKDAASDGVKAAVVKMKPEGR
LQPHGKLTLLNSNEPLYIPITQEPAPMTEDVLEEQSEVLAKLGTSAEGAHLRARMQSACL
LSDMESFKGANPGCSLEDFVRWYSPRDYVEEEVSDEAGRTLVQGSLSARMKIPGNMWVEA
WESAKATPARRQRRLFDETKEAERVLQYLAVQKPSDLTRHLLPCIVHAALLKVKEEEAVE
DVGTVRKIIPQVSSHASKLLRHPNPDLKKLEDVINQITMLEATVARARSLRAKFSLGKAE
RGEDTEELELFVSSLLEEPEVGVTGAGRGPAGTIIHKLFVNAQRLADSSDEAALLTPLDE
DAGRGAGGPDARKPTGGGVPDFPPPAGREILLRTCVPRPAPYSKALPQRLFCVLMREEYR
LAGAFSSDTSFF
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggacagtgatcctgagtcggaggtgtttgagatcaccgatttcaccacagcg
tccgagtgggagaggtttgtgtcccgagttgaggaagtgctgaacgactggaaactgatt
ggtggtaacattggcaagcctcctgaaaagggagaatacaccacaggaacatgggaggag
aagtcacgcgagatcaattttgccgatttcaagttttccatcacgcatcattacctgaaa
caggactgcgtggaaaacgaagggaaggaggacagcgaggaagatgcttttcctttggcc
atgcaggacctgctgtgcatgaataatgactttcctccgagggcgcactgcctggtcaga
tggtatggagtgcgggaatttgtggtcatctctcctggagcaaactgcgaagcaatcgtc
agcgagtccaagtgcaacctgctgctcagttcggtctccatcgctttgggaaacaccggc
tgccaggtgccgctgttcgtgcagatccagcagaagtggaggaagatgtacgcgggcgag
tgccagggccccggggttcgcaccgacttcgagatggtgcatctgcgcaaagttcccagc
caatacaaccacctctccggcctgctggatatcttcaaagccaaaataggatgcccgctg
acaccgctgccccccaccaacatcgccatccgcttcacctacatcctccaagactggcag
cagtactcctggccccagcagccgcccgatttcgacgccctgctcgccggagaagtcgga
ggcgtggagttcggaaaacttccgttcggagcttgcgaggatccgataagtgagcttcac
ctcgccaccacctggccccacctgaccgaaggcatagtcgtggacaacgacgtctactct
gatttggaccccctccaggctccccactggtccgttcgggtgcgaaaagcggacaatccc
cagtgtttgctcggcgactttcttatggagttcctcaagctgggcagccggaaggagtcc
acagaggagatcctgggtaggagttcagccgaggaagagggcaaagacaacagtgacatc
acgcaagcgctgtccaagctgacggagcccacggccgtgccgatccccaagctgtcggtc
tccaacatggtgcacagcgctcgcaaacgcatcagccgccaccgccgtaacgaccaatca
ccgctcagtaacgatgtcctcaactccatcttactgtatctcttcccagatgcagcgctg
gacaaatcggactcgagcgaagcgaaagcgccgcactcgaaccctggagtaaagaccgac
caggacaaagacacggaggaccacaacctgttcagcgtgctgaagtcggctccgtgggac
tgcctgacctacagactggcgttgtgcgtgtgtttggtgaacttctaccacggcggtgtg
agagccgtggcccacctctggcaggagtttgttctggagatgcgctatcgctgggagaac
aatcatctcatctacgggttgcctgctgggcctccggatcttcgatgctgccttctacac
caaaaactccagatgctcaactgctgcatcgagcacaagaaagtgagggacgagctccgg
aaagacgtgtccagcgataacggcctcccggtgcctcaggtgtccccggggaagtcctgc
gattcgtggagcgacagcgaggacgagttcttcgagtgcctgagcgacgccgaggacatg
aaggatgcagcttcggacggggttaaagcagcagtagttaaaatgaagcctgagggtcga
ctgcagcctcatggcaagctgactctgctcaactcgaacgagccgctctacattcccatc
acgcaggagccggcgccgatgaccgaagacgtcctggaggagcagtcggaggtgctggcc
aagctgggcacgtcggccgagggagcccatctccgtgcccgcatgcagagcgcctgcctg
ctctcggacatggagtccttcaagggggccaatcccggctgttccctggaggattttgtg
cgctggtactcgccaagagactacgtggaggaggaagtgagcgatgaagcgggcaggacg
ctggttcagggatcgctgagtgccaggatgaagatcccgggcaacatgtgggtggaagca
tgggagagcgccaaggccacgccagcacgcaggcagaggcggctgttcgacgaaactaaa
gaggccgagagggtgctgcagtatctggcagtacagaaaccctctgacctcacgcgacac
ctgctgccctgcatcgtccatgcagctctcctcaaagtgaaggaggaagaggcggtcgag
gacgtcggcacggtgcgtaaaatcatcccgcaggtcagctctcacgccagcaagctgctc
cgtcatcccaatcccgatctgaagaaactggaggatgttattaaccagatcacaatgctg
gaggccacggtcgcccgggcgcgctctctcagagccaagttcagcctcgggaaagcagag
cgaggagaggacaccgaggaactcgagctgttcgtgagctctctgttagaggagccggag
gtgggcgtgaccggagcggggcggggcccggcaggcactatcatccataaactgttcgtc
aacgcacagcggctggctgattccagtgatgaggcggctctgctgacgccgttagacgaa
gacgccggccgaggagcaggtggaccagacgctcgcaagccgacaggaggcggagttccg
gatttcccgcccccggctggtcgggagatcctgctccgtacgtgcgtcccgcgcccggcg
ccgtactccaaagccctgccgcagcgtctcttctgcgtcctcatgagggaagaataccgg
ctcgccggagcgttctcgtccgacacgtcgttcttctga
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