Silurus meridionalis (southern catfish): 124381087
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Entry
124381087 CDS
T08004
Symbol
acsl1a
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 1a isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo00061
Fatty acid biosynthesis
smeo00071
Fatty acid degradation
smeo01100
Metabolic pathways
smeo01212
Fatty acid metabolism
smeo03320
PPAR signaling pathway
smeo04146
Peroxisome
smeo04216
Ferroptosis
smeo04920
Adipocytokine signaling pathway
Module
smeo_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
124381087 (acsl1a)
00071 Fatty acid degradation
124381087 (acsl1a)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
124381087 (acsl1a)
09143 Cell growth and death
04216 Ferroptosis
124381087 (acsl1a)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
124381087 (acsl1a)
03320 PPAR signaling pathway
124381087 (acsl1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
smeo01004
]
124381087 (acsl1a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smeo04147
]
124381087 (acsl1a)
Enzymes [BR:
smeo01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
124381087 (acsl1a)
Lipid biosynthesis proteins [BR:
smeo01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
124381087 (acsl1a)
Exosome [BR:
smeo04147
]
Exosomal proteins
Exosomal proteins of breast milk
124381087 (acsl1a)
Exosomal proteins of breast cancer cells
124381087 (acsl1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
CE2_N
Motif
Other DBs
NCBI-GeneID:
124381087
NCBI-ProteinID:
XP_046698420
LinkDB
All DBs
Position
28:complement(1984986..1997477)
Genome browser
AA seq
697 aa
AA seq
DB search
MQVQDLIWQFRIPELGDFRHYVRSLPTNTLMGMGAFAAITTYWLATRPRALKPPCDLTMQ
SVEVEDEEYARRSILLDSNRLMTHFYDDARTMYEVFLRGIRVSNNGPCLGSRKPKQPYEW
LSYQEVADRAEMIGSALLHRGHSKAGDKCIGIFSQNRPEWTVSELACYTYSLVAVPLYDT
LGTEAISYIIDKAEISTVICDVADRVHTLLECVSGREHSVRTIVLIEDKNSELTSQAEKE
GVQIISLRDLEALGKAHHRCPMPPTPEDLALICFTSGTTGNPKGAMLTHSNVISNCAAFI
RITQIHCMLNHTDIHISYLPLAHMFERVVESVILVHGAKIGYFQGDIRTLMDDLKTLKPT
VFPVVPRLLNRMFDKIFGQANTPLKRWLLDFATRRKESELRSGVVRKDSMWDKLIFNKVQ
VSLGGRVRLMITGAAPVSPTVLTFLRAALGCQFYEGYGQTECTAGCTMSLPGDWTAGHVG
PPLPCNYVKLMDVEEMSYFAANGEGEVCVKGPNVFQGYLKDPEKTAEAIDKDGWLHTGDI
GKWLPNGTLKIVDRKKHIFKMAQGEYIAPERIENIYIHSDPVAQIFVHGDSLQACLVGIV
VPDPDFLPGWAKKRGVVGSYLELCRRKEVKNAILEDLVRLGKEGGLKSFEQVRDIVLIPE
MFSVQNGLLTPTLKAKRTELRNRFQEQINQLYSKIKM
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtgcaggatctgatttggcagttccggataccggaattgggtgacttcaggcac
tatgtgcgtagtttgcccaccaacacgctcatgggcatgggtgcttttgccgccatcacc
acctactggctcgccaccagaccccgagccctgaagcccccctgcgatctcaccatgcag
tctgtggaggtggaggacgaggaatacgctcggcgctccatcctcctggacagcaacagg
ttgatgactcacttctatgacgatgcccggaccatgtacgaggtgtttctccgtggaatc
agggtgtccaataatggtccttgtttaggatcgaggaaacctaagcagccatacgaatgg
ctctcgtaccaagaggttgcagaccgagccgagatgattggctcagcattgctccacaga
ggtcacagtaaagctggagacaaatgcatcggtatcttctcccagaacagacccgagtgg
actgtatctgagctggcctgctatacctactcactggtggctgttccactgtatgacaca
ctgggcacagaggccatcagctacattatagacaaagccgagatctcgacggtgatctgt
gatgtggcggacagggtccacacgctgctggagtgtgtgtccgggcgagaacacagcgtc
aggaccattgtactgatagaggacaagaacagtgagctcacttcacaagcagaaaaggag
ggagtccagatcatcagtctgagggatttagaggctctgggcaaagcccatcacagatgt
cctatgcctcctacacctgaagacctcgcactgatctgcttcaccagtggaaccacaggg
aaccccaagggcgcaatgctcacacacagcaacgtgatctccaactgcgctgccttcatc
cgcatcacccagatacactgcatgctcaaccacaccgatatccacatatcttaccttccc
ctcgctcacatgttcgagagggtggtagagagtgtgatcctggtgcacggagccaagatt
ggttactttcagggtgacatccgtacgctgatggatgatctgaagaccctcaaacccact
gtgttccccgtcgtaccccgactcctcaatcgcatgtttgataagatcttcgggcaggca
aacactccacttaagcgctggctgctcgacttcgccaccaggaggaaagagtcggagttg
cgcagtggcgtggtgaggaaggacagcatgtgggacaaactcatcttcaacaaagtccag
gtgagtttgggtgggcgtgtgaggctgatgatcaccggtgctgctcccgtatcccccacc
gtgctgacgttcctgcgggctgcactcggctgccagttttatgaaggttacggacagaca
gaatgcactgcaggatgcaccatgtccctgccaggagactggacagcaggtcacgtgggt
cctcctttaccctgtaattatgttaaactgatggatgtggaagagatgagctactttgcc
gctaatggagagggggaggtgtgcgtgaaaggaccgaacgtgttccagggctacctgaag
gatccggagaagaccgctgaggccatcgataaggacggctggttgcacacgggcgatatt
ggcaaatggcttccgaacggcactctgaagattgtagacaggaagaagcacatctttaag
atggcgcaaggagaatatattgctcccgagaggatcgagaacatctacatccacagcgac
cccgtggctcagatcttcgttcatggagacagtctgcaggcatgtttagtcggcattgtg
gtaccagaccctgactttcttccaggatgggccaagaaaagaggtgttgtgggttcctac
ctcgagctgtgcaggagaaaggaagtgaaaaacgccatattagaagaccttgtgcggttg
gggaaggagggcggtctcaagtcctttgagcaggtgagagacatcgtcctcatccctgag
atgttctcggtgcagaacggcctcctcacacccaccctgaaggccaagagaaccgagctg
aggaaccgatttcaagagcaaatcaatcagctctactccaagatcaagatgtaa
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