Silurus meridionalis (southern catfish): 124381127
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Entry
124381127 CDS
T08004
Symbol
ncapd3
Name
(RefSeq) condensin-2 complex subunit D3
KO
K11491
condensin-2 complex subunit D3
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smeo03036
]
124381127 (ncapd3)
Chromosome and associated proteins [BR:
smeo03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin II
124381127 (ncapd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cnd1
PDS5
HEAT_2
Cnd3
Adaptin_N
HEAT
TFCD_C
Motif
Other DBs
NCBI-GeneID:
124381127
NCBI-ProteinID:
XP_046698480
LinkDB
All DBs
Position
28:complement(3019912..3032550)
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AA seq
1410 aa
AA seq
DB search
MELLRALQLLKLPAVSTAWVDAVWECEFTDTEPLDPTVEDEIKEDVNVFKKVYKQLLPFS
CEEENTQSVWNVFGENGVSVKSLVAVLACFVLGAKTKSSSVEQRRVSLQSASLYLLLLRI
PGSVANKVFHQILFDTCLDIVLKCWPQSSGKKRKKDAIKSSQAESKSGKRPKPPKKVPEE
MEIDEEEEEEDEEVYFSAQDLLVLREDVAGLVRTLLKLLEKFSLRDKPQSADSCVRLFTE
LTNFEPVIGELSFSEKRDVDKLQSLPELAFHGLWLLCSSNHGEGNECRRRVFHRLLYVIL
MMKKDRVKPCLLTPSQAVCAARDQAILFISHIMDEQKEVMLPLLKILVQHICHQMVEKAE
YRASGAEAVGKLVTKMPCNNYAAFVKWLHNYSLNTRVAFRMFALDVAMVLLAQEEREADG
ALEPDLALYLSHRFLVHSVVYGRRSDVSPTVRAHAMHCLALCLELPSQNATKCIHELFSS
SSTTGSQTMMETGHSEQTLKRPETVQRTALTFRTIDLTKHKSLGAASRHCTNDGMSRDAT
AIEYQETLALFKQRVSDPKTNVRKCALETIMSLLKHGVITCSAENLEILSERCRDPAVSV
KKKAMQCLMDLLTALPDNIEVQEAWLRGVVPAVMDSESSVQDKALECLNDKIITHIKSQG
SYRHDNASQRVAWDLLKLMCDKCQDLRRYFSKAFSIWSRQEKFSATLVNSLIWHTERDHA
AAAWLMLAKVSSCCAKLNMGTILEAWDRTVRSPVVDVATTGHILTVLGHIAASLNDDTKS
RIIDDLMGWLKSFSLPLEVISASVDALFSLGQADNIKETMSFLNKYCGELVSVCEEYLST
VLLNERGAENLNEDLLVKHLYTLGVSSLHCPAKVQKRVFLLVQSILTTSEQPVGGEGAEL
PASQPLSQFKPSSMPTVVRAHAVITLGKLCLQHEELMMRYVPAFARELEVGMELAVRSNV
VVVLCDLCVRYPNTVSRYISNISACLRDTEPIIREQSLIMLTNLLQEEFVKWKGSLFFRF
AVALVDPDPSIADLCEYCLVELLLKKNPLMFSQHFIECILHFNAYEKHKKYNRFTQTERE
KSRFSLKGQMNQSKRFRIYRFLLKHFTDEQRFNITTRISQDVLACFVDSELPLDSEGAEL
LADVFDVLSLKEIKLIAMSGSSASDDAPEDEMAVAKAVLQKKLVSQVQKKNFVENMIPMV
IALKNMLEEKRLPVLKHLMSYLQVAMQDYRSEVKELFAGDEQLAAEVEYNLKMFEKQKEQ
QELEQRLSSFILSPRTKGSATASPAPGVRGTPLPPQSAQRPSNTPKSADELRHRTFTGML
TPVGQRPSRGVTSSGPSKGVYDGRAISTPQESMNEVTFGEQFSAICYEGAGKSNENVLHL
MSPEHETPAPRQWNVESPIVRKSRSKRRPL
NT seq
4233 nt
NT seq
+upstream
nt +downstream
nt
atggagttgttgcgcgcgctgcagctgttgaagttacccgcggtgtccaccgcctgggtg
gacgctgtgtgggagtgtgagttcacagacactgaacccctcgaccccactgtggaagat
gaaataaaagaagacgtgaacgtctttaagaaagtgtataagcagttgctgcctttctcc
tgtgaagaggaaaacacacagagcgtgtggaacgtgtttggagaaaacggcgtgtcggtg
aagtctctggtggccgtgctggcgtgtttcgtcctcggcgccaaaaccaaatcgtccagt
gtggagcagagacgcgtcagtctgcagtctgcgtcactgtacctgctgctcctcagaatc
ccaggcagcgtggccaataaagtgttccaccagatcctgttcgacacatgcctggacatt
gtgctgaaatgctggccgcagagctcggggaagaaacgtaagaaagatgcgataaagagc
tcgcaggctgaatccaaaagcgggaaacgccccaaacccccgaagaaagtcccagaggag
atggagatcgatgaggaagaggaagaagaggacgaggaggtgtatttttcagctcaggat
cttttggtattgcgtgaggacgtggcaggactcgtacgaacgctgcttaaactgctggag
aagttttcactccgggacaaaccgcagagcgccgatagctgcgtgcggttgttcactgaa
ctcaccaacttcgagccagtcatcggagagctgtccttctctgagaaacgcgatgtggac
aaactgcagagcctccctgagctcgcttttcatggcctttggcttctctgctcctccaat
cacggtgaaggaaatgagtgtcgccggcgtgtctttcaccggctgctgtacgtcattctg
atgatgaagaaggacagagttaaaccgtgtctgctcactccatcgcaggccgtctgtgcc
gctcgagaccaggccatcctgttcatcagtcatatcatggacgagcagaaagaggtcatg
ttgccactgcttaagatcctcgtacagcacatctgtcaccagatggtggaaaaggcagaa
taccgtgccagtggtgctgaggctgtggggaagcttgtgaccaagatgccatgtaacaac
tatgctgcttttgtcaagtggcttcataactattctctgaacaccagggtagcgtttcgg
atgtttgctctggacgtagccatggtgctgttggcgcaggaggaacgggaggcagacggg
gcgctcgaacccgatctggcgttgtacctctcgcaccgtttcttggtgcacagcgtggtg
tatggtcgccgctccgacgtctcgcctacagtccgagcacatgccatgcactgcctcgcc
ctgtgtctcgagctgcccagccaaaatgccaccaaatgcatccatgagctcttctcttcc
tcctccactaccggctcacagacgatgatggagacgggacactcggaacagactctaaag
agaccagagaccgttcaaagaacagccctgacctttcgcaccatcgatctcaccaagcac
aagagcctgggagctgcgagtcgccactgcaccaacgacggcatgagccgtgacgctacc
gccattgagtatcaggaaaccttggctctgtttaaacagcgtgtgagtgaccccaaaacc
aacgttcggaaatgtgcccttgagacgataatgagtctgctgaagcacggcgtgatcacg
tgtagtgcggagaatctggaaattctgtccgagcgctgcagagacccggcagtgtctgtg
aagaagaaagccatgcagtgcctcatggatcttctcactgcgctacctgacaacatagag
gtgcaggaggcatggctgaggggcgtggtcccagctgtgatggactctgagagctctgta
caggacaaagctctcgagtgcctcaacgacaaaatcatcactcacatcaaaagtcaaggc
agctatcgtcatgacaacgcctcccagagagtggcctgggatctgctgaaactcatgtgt
gataaatgtcaggacctcagaagatatttcagtaaggcgttcagcatatggtcaaggcag
gagaagttctctgccacgttggtgaacagtctgatctggcacacggagcgtgaccacgca
gccgccgcatggctcatgctagctaaagtgtccagctgctgcgctaaactcaacatgggg
accattctggaggcttgggatcgcaccgtcaggtctcctgtagttgatgtggctacaacc
ggccacattctcaccgttctcggtcacatcgcagcgtctctcaacgacgataccaaaagc
aggatcattgacgatctgatggggtggctgaagagcttcagtcttcccctggaggtgatc
agcgccagtgtggacgctctgttcagtctcggccaagccgacaacatcaaggaaaccatg
agctttctgaataagtactgtggagagctggtgtctgtgtgtgaggagtacctgtccact
gtcctcttaaatgaaagaggagcagaaaatctaaatgaggatcttctggtgaagcacctg
tacactctgggcgtgtcctctcttcactgccctgcaaaagtgcaaaaacgagtctttctc
ctcgttcaatccattctaaccacatcagagcaacctgtgggtggagagggtgcggagctg
ccagctagtcaacctctctctcagtttaaaccctcctcgatgccaacagtggtacgagct
cacgcggtcatcacgctagggaagttgtgcctgcagcacgaggagctgatgatgcgctac
gttcccgcgtttgcacgcgagctcgaggtgggaatggagttggcggtgcgcagcaacgtg
gtggtggtgctgtgtgatctgtgtgtgcgctaccccaacacagtgagcaggtacatcagt
aacatctcagcctgcctccgagacaccgagccgatcatcagagagcagagcctgatcatg
ctcaccaacctgctgcaggaagagtttgtcaaatggaagggttccctgttcttcagattc
gctgtggccctggtggacccggacccctccattgcagatctctgcgagtactgtctggtg
gagctgctgctgaaaaagaacccgctgatgttctctcagcacttcatcgagtgcatcctt
cacttcaacgcttacgagaaacataaaaaatacaaccgcttcacgcagacggagagggag
aagagcaggttttctctgaaaggacagatgaaccagagcaaacgtttcaggatctacaga
ttcctcctgaaacacttcaccgatgagcagcgctttaatatcacaaccagaatcagccag
gatgtcctggcatgctttgtggattcggagctgcctttagattcggagggtgctgagctg
ctggccgacgtgtttgacgttctttcactaaaggagatcaagctgatagccatgagcggc
tcttcagcgagcgacgatgctcctgaggacgagatggctgtcgctaaagctgtgctgcag
aagaaacttgtttcccaggtgcagaaaaagaactttgtggagaacatgatccctatggtc
atcgccctgaagaacatgctggaggagaagcgcttgcccgtgctcaaacatctcatgtcc
tacctgcaggtggccatgcaggactatcgctctgaggtgaaggaactctttgcaggagat
gagcagttggctgcagaggtggagtacaacctgaagatgtttgagaaacaaaaagagcag
caggagttggagcagcggcttagcagcttcatactgtcacccagaactaaaggcagcgcc
actgcatctccagctccaggtgtcagaggcacacctctgccacctcagtctgcccagaga
ccctcaaacaccccaaaatctgcagacgaactccgacatcgtaccttcactggaatgctg
acccctgtgggccagagaccctctcgtggtgtaacgtcttcagggccttcaaaaggagtg
tatgatgggagagcgatcagcacgccgcaggagagcatgaacgaggtgacgttcggagag
cagttcagtgccatctgctacgaaggagccgggaagagtaatgagaatgttctacacctg
atgtcacctgagcacgaaactccagccccgaggcagtggaacgtcgagtctcctattgtg
aggaaaagccggagcaagagaaggccattatga
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