Silurus meridionalis (southern catfish): 124381133
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Entry
124381133 CDS
T08004
Symbol
glrba
Name
(RefSeq) glycine receptor, beta a isoform X1
KO
K05196
glycine receptor beta
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04080
Neuroactive ligand-receptor interaction
smeo04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
124381133 (glrba)
04082 Neuroactive ligand signaling
124381133 (glrba)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124381133 (glrba)
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
smeo04040
]
124381133 (glrba)
Membrane trafficking [BR:
smeo04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
124381133 (glrba)
Ion channels [BR:
smeo04040
]
Ligand-gated channels
Glycine
124381133 (glrba)
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
124381133
NCBI-ProteinID:
XP_046698487
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Position
28:complement(2967456..2993625)
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AA seq
506 aa
AA seq
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MRCPVMDLRSLFLLLLLVQFSVEGDAKDGGKPKKGKKGKKPVVCPSQLSAEDLDRVPANS
TSNILNRLLVTYDSRIRPNFQGIPVEDKVNIFINSFGSIQETTMDYRVNIFLRQRWNDPR
LRLPTDFKSDALTVDPKMFQCLWKPDLFFANEKNANFHDVTQENILLFIFRNGDVLISMR
LSVTLSCPLDLTLFPMDTQLCKMQLESYGYTTKDLVFMWQSGDPVQMDEIALPQFDVKQE
DIAYRNCTKFYSGTGYYTCVEVIFTLRRQVGFYMMGFYAPTLLIVVLSWLSFWINPDASA
ARVPLGILSVLSLTNECTSLASELPKVSYVKAIDVWMIACLLFGFGSLVEYAVVQVMLNS
PKQIEAEKVRMAQKEKEKEEKEKEGKTASKANSINGTGGTPIHVNTLQVVETRCKKVCTS
KSDLRSNDFSIVGSLPRDFELSNFDCYGKPIESTNALLKSQNKNAKKPAPPKPVIPSAAK
RVDLYARALFPFSFLFFNVIYWSVYL
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgaggtgtccagtcatggatctgaggtcgctgttcttgctgctgctgctggttcagttt
tccgttgagggcgatgcgaaagacggcggcaaacccaagaaaggcaagaaaggcaaaaaa
cctgtcgtctgcccttctcagttatcagccgaggacctcgatcgagttcctgccaattcg
accagcaatatcctgaaccgtttgctcgtgacgtatgactcccgaatccggcccaacttc
caaggcatcccagtggaggataaggtgaacattttcataaacagctttggctcaattcaa
gagaccacaatggattaccgtgtgaacattttcctgcggcagcgctggaacgacccgagg
ttgcgtctgccaacagacttcaagtccgacgctctgacggtggacccaaaaatgttccag
tgcctgtggaagcccgatctgttttttgccaatgagaagaacgccaacttccatgacgtg
acgcaggagaacatcctgctgttcatcttccgcaatggcgacgttctcataagcatgagg
ttgtcagtgactctatcatgtccactggatctcaccctttttcccatggacacacaactt
tgcaagatgcagctagagagctacggctacaccacgaaggacctggtgttcatgtggcag
tctggtgacccagttcagatggatgagatcgctttgccgcagtttgatgtcaaacaagag
gacatcgcttacaggaactgcaccaaattctactctgggacaggttattacacatgcgtg
gaggtgattttcactctcaggaggcaggtcggcttctacatgatgggtttctacgctccc
acgctccttatcgtggtcctgtcatggctgtctttctggattaacccggacgccagtgct
gcccgcgttcctttgggtattctctctgtcctctcgcttaccaacgaatgcacatcttta
gcatctgaactgccgaaagtctcctatgtgaaggccatcgatgtctggatgatcgcctgc
ctgcttttcggctttggctctctggtggagtatgcggtggttcaggtgatgctgaacagc
cccaagcagatcgaggcggagaaggtgaggatggcgcagaaggagaaagagaaagaagag
aaggagaaggaagggaagacggcgtccaaggcaaactccatcaacggtaccggaggaacc
ccgattcatgtgaacacactgcaggtggttgagactcgttgtaagaaggtgtgtacctcc
aaatcggacctgcgctcgaacgacttcagtatcgtcggctccctgccacgtgatttcgaa
ctctccaacttcgactgctacgggaagcccatcgagtccacaaacgctctgctcaaatcg
cagaacaagaacgccaagaagccggcgcccccgaaacccgtcatcccgtccgccgccaag
cgcgtcgacctgtacgctcgtgccctcttccctttctccttcctgtttttcaatgtcatc
tactggtccgtttacctgtaa
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