Silurus meridionalis (southern catfish): 124381149
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Entry
124381149 CDS
T08004
Name
(RefSeq) multiple PDZ domain protein isoform X1
KO
K06095
multiple PDZ domain protein
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
124381149
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Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
L27_2
MPDZ_u10
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
124381149
NCBI-ProteinID:
XP_046698505
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All DBs
Position
28:6989412..7030573
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AA seq
2035 aa
AA seq
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MIETIDTQHCLQAVERLQARLKERGGDVPSDEKLNLLKSVLQSPLFHQILALQRSIQHLK
EQPSCANSDYNGGYVDLAQINGRTSSEEHERIIRTMAQGRYVIHTDLVKPVSGGLGFSVV
GLRNENRGELGIFVQEIQAGSVAYCDGKLKEGDQILAINGQPLDQNISHQQAIVLLQRAS
EHVQITVARGAIPQLSSPVVSRTPSAASTLSAHSSGTHWTQVETIELVNDGTGLGFGIVG
GKNAGVIVKTILPGGIADKDGRLRSGDHILRIGDTDLFGLGSEQVAQVLRQCGNRVKLLI
TRATVDEASPVPVALPTVTEQQDHEEEEQDAFDVSLTKNTQGLGITIAGYIGDKNSEASG
IFVKSITAGSTVEQDGRIHVGDQIIAVDGVNIQSYTNQQAVELLRHTGQTVHLKLVRHGF
RPEDTLLPSMAVSSEAKPRQESESLGSMNDPMETSSRVVAAAVLPCASEQNKGFRLNDDE
EEELRKEWQNAVGPSNEVIVVQVEKCTESSGLGISLEASAGHHYICSVLPEGPVGRSGKF
FSGDELLEVNGKPLRGETHKEVVGILKELPVYVHMVCCRPAPLPSTDAQTDQPELEEIST
KSIEKDFDDVEDFLMPGESETSPRNTMPENTGGTSLAMWESEIQDIELEKGERGLGFSIL
DYQDPMDPAKTVIVIRSLVPEGVAELDGRLLPGDRLMYVNSMNLESATLEEAVQALKGAS
LGTVHIGVAKPLPTLILSRTMQLTPSSIFSALSRMKRDEEEEEEEEEEVLFRAVPVLIDT
SDADLSGEKFDRPYDSEEDDTFQASMIALHGSTCSGDLASQTAVQASTPQRNAHLDSFME
YPFMAVSEIREKFPPMDEEETSVRLKAGTGRLGSTPSNLFMEHDSEKIDPVDPLMSKAGL
CSANPVSTCTEENLITTLYRETERPILPEIRGRAHDGCYVAASQEEEDDFPMDKTPEEET
DQQEMTPGSNFERTITVVKGNSSLGMTVSAVKDGVGMLIRSIIHGGAISRDGRLGVGDLI
LAINGESTGNLNNAQARAMLRRHSLIGSDMGSSLAPEEELCPFYIITYVPVEYLEDYKAL
KQAKDDAVAVDTLSTPGSLSELPEREDGEGEESVLQTANFSSWNQPRKVELYREPGKSLG
ISIVGGRGMGSRLSNGEVMRGIFIKHILEDSPAGRNGTLKTGDRIVQVDGVDLLDASHEQ
AVEAIRKAGNPVVFLVQSIIHRPRKPPVPFLQLNSSSNAAGGFINTPPQTSAADSVEGRT
ARFSNPNNKDVESQSRLFLRLSPTNPFTPTPFKLNREPGKISPTMPFLSVPRIGETDTDT
LTEIPDHNKLPHDTVEEEEDEFGYTWKKVVERYGRLPGVLHMIELEKGMSGLGLSLAGNR
DRLRMSVFVVGIDPNGAAGRDGRIIIGDELLEINGQILYGRSHQNASSIIKSAPSKVKII
FIRNTESLTQMAVMPTKELADILDTQPEEDGGLVFSEEDKNGMIIQDVIEDGAAAMEGNT
QPGDRVMVVDNEVSQGLSVEKVTSLLSKAKSSGKLTLCTESHALISASQTRRLSDPGVVT
SIPLSLTPPEMESIKSSSRSSTPATLASDPVTCPIIPGCETTIDISKGRTGLGLSIVGGC
DTLLGAIIIHEVYEEGAAAKDGRLWAGDQILEVNGIDLRTASHDEAINVLRQTPQRVCLT
VFRDEAQYKEEELWDVLSVELQKKPGQGLGLSIVGRRNDTGVFVSDIVKGGIVESDGRLL
QGDQILSVNGEDVRIATQESVAALLKCCVGPITLEVARFKAGPFHSERRLSQGSQISEGG
SFKASQLSFTGSGKSQEDYEDNFRSQESLDQDFRTLELCKSPSESLGISIAGGVGSPLGD
VPIFIAMMNPAGLAAQTQKLRVGDRIISICDTSTEGMAHSQAVSLLKTTTGTIRLQVVGG
DTTVTGPALDQTSGLTSSSIFHDDLGPPQCKTISLERGPDGLGFSIVGGFGSPHGDLPIY
VKTVFGKGAAAEDGRLKRGDQIVAVNGQSLEGVTHEEAVGILKKTKGTITLTILS
NT seq
6108 nt
NT seq
+upstream
nt +downstream
nt
atgattgaaacaatcgatacgcagcattgtctgcaggcagtggaacgactgcaggctcgt
ctgaaggagagaggaggtgatgtgccttctgatgagaagctgaacctgctcaaatctgtc
ctgcaaagccctctgttccaccagatccttgccctccagagatcaatacaacatcttaag
gaacagccttcgtgtgcaaactcagattataatggagggtatgttgacctggctcagatt
aatggacgaacctcatcagaggagcacgaacgcatcatccgtaccatggctcagggtcgc
tatgtaatccatactgacttggtgaaaccagtatcaggaggcctgggcttcagtgtggta
ggactgcgaaatgagaaccgtggagaactcggcattttcgtccaggaaatccaggcaggg
agcgttgcatactgcgatgggaagctgaaggaaggagatcagatcctggcgataaatgga
cagccactggaccagaacatcagccatcagcaggcaattgtgctgctgcaaagagcatct
gagcatgtacagattacggtcgcccgaggggcaattcctcagctttccagcccagtggtg
tccagaacacccagtgctgctagtacactgtctgcacattcgagtgggactcactggaca
caggtggagactatagagctagtcaatgatggcactggtctgggatttggcatcgttggg
ggtaaaaatgcaggtgtcattgtcaagactattttacctggtggtattgctgataaggat
ggtcgcttgcgcagtggtgatcacatcctgcgtattggggacactgacctgttcggtttg
ggcagtgagcaggttgcccaggtgctgcgacagtgtggaaacagagtcaaactgctcatc
accagagcaactgtagatgaggcctctcctgtgcctgtagccctgccaacagttactgag
caacaggaccatgaggaagaggagcaggatgcgttcgatgtgagtctgacgaagaacacg
caaggtctcggtatcaccattgcagggtacataggagacaagaactctgaagcctctggg
atctttgtgaagagcatcaccgctggaagtactgtggagcaggatggtcgcattcatgtt
ggagaccagatcatagctgtcgatggtgtgaacatacagagctacaccaatcagcaggca
gtggagctcctacgccacaccggtcaaacagtccacctcaaacttgtccgccacggcttt
agaccagaagacactcttctgccgagcatggctgtgagcagtgaagccaaaccaagacag
gagagtgaatccttgggcagcatgaatgaccctatggaaacctccagccgtgtggttgct
gcagctgttttgccgtgtgcgtctgaacaaaataaaggcttcagattaaatgacgatgag
gaagaggagctgaggaaggaatggcaaaatgctgtcggtcccagcaatgaagttatagtg
gtacaggtagagaaatgtactgaaagcagtggactaggaatcagtctggaagcaagcgct
ggtcaccactacatatgctcggttttacccgagggacctgtgggacgttctggaaaattc
ttcagtggcgatgaactactggaggtgaatggtaaacctcttagaggtgagacacataaa
gaagtggtgggcattctgaaggagctgcctgtgtacgtgcacatggtctgctgtaggccc
gctcctttgccctctacggacgctcaaaccgatcaacctgagctggaagaaatatctaca
aagtcaatagaaaaggactttgatgatgttgaggacttcctcatgcctggtgaatcagag
acaagcccaagaaataccatgccagaaaatactgggggaacttcattagcgatgtgggag
tcagagattcaagacatcgagctggagaaaggagaacgtggactgggttttagcatccta
gactaccaggaccctatggacccagctaagaccgtcatcgtgatccgatctctggtgcct
gaaggtgtggctgaacttgacggacgtttgttgccaggagaccggctgatgtatgtcaac
agcatgaatcttgagagtgctactctggaggaggcagtacaggcgctaaagggggccagc
ttaggcacagtccacatcggagtagccaaaccactacctactctcattctctcaaggact
atgcaactgactccctcctccatcttctcggctctgtcgcggatgaagagagatgaggag
gaggaggaggaggaggaggaagaagtcttattccgcgctgtgccagtactgatcgacacc
agcgatgcggacttgtccggcgagaagttcgatcgtccttacgacagcgaggaagacgac
acgttccaggcgtctatgatcgctctacatggaagcacctgcagtggagatctcgcctct
cagacggctgtacaagcctccactcctcagagaaacgctcacctggattcgttcatggaa
tacccttttatggcggtgtctgaaatcagagagaaatttcctcccatggatgaggaggaa
acatctgtacggcttaaagcagggactggaagacttggttccactccctccaatctattt
atggaacacgattcggagaaaatagacccagtggacccactgatgtctaaagccgggctt
tgcagcgcaaaccctgtttccacttgtacagaagagaatctcataacaacattatacaga
gagacagagagaccaatcctgccagagatccgagggcgagcgcatgacggttgttatgtt
gctgcttctcaagaggaggaggatgatttcccaatggataaaactccagaagaagaaacc
gatcaacaagaaatgactccagggagcaattttgagaggaccatcaccgttgtcaagggc
aactcaagtttaggtatgacagtgagcgcggtgaaggatggtgtgggaatgctgatccgc
agtatcattcacggcggggccataagcagagatggacgtttaggtgtcggagacctcatt
ctcgccatcaacggtgaatcgaccgggaacctaaacaacgcgcaggcacgcgccatgttg
cgcagacactcactcattggatctgacatgggatcatcactcgctccggaagaggagctc
tgccctttttatatcattacctatgtaccagttgagtatttagaggactacaaggctctt
aagcaggccaaggatgatgccgttgctgtggatacattaagcacaccagggtctttaagt
gagcttcctgagagggaggacggtgaaggggaggaaagcgttctacaaacagcaaacttc
agcagctggaaccaaccgaggaaggtggagctctacagggagccaggaaaatctctgggt
atcagcattgtcggtggccggggcatgggcagtcgtctgagcaatggtgaagtgatgcgt
ggcatcttcatcaagcatatccttgaagacagccctgcaggacgcaacggaactctgaaa
actggagacagaattgtacaggtggacggtgtggatctgctagatgccagtcatgagcaa
gctgtagaagccattcgtaaagctggcaaccctgttgtatttctggtgcagagcattatc
cacaggcctaggaagccacctgttccttttctgcagctaaacagcagctctaatgcagca
ggcggctttataaacacccctccgcagacatcggcagccgactccgtcgagggcagaaca
gcgcgattctcgaaccccaataacaaggatgttgagagtcaaagtaggcttttcctccgt
ctctccccaactaaccctttcacccctactccatttaagctgaatcgagagccagggaaa
atttctccgacgatgccatttctctcggtgccacgcataggcgagacagacacggacacg
ctgaccgagatccctgatcataacaagcttcctcatgacacagtggaggaagaggaagat
gagtttggctacacttggaaaaaggtggtcgagcgttatgggagactgcctggtgtgttg
catatgatcgagctggagaagggcatgagtggtttaggcctgagtctggcagggaacagg
gatcgcttaaggatgagtgtcttcgtggtaggcatcgatcccaatggagcagccggaaga
gatggacgcatcattataggagatgagcttctggagatcaatggtcagattctgtatggg
cgctcccatcagaatgcctcgtccatcatcaagagcgcaccatccaaagtcaaaatcatc
ttcattagaaatacagagtctctcacccagatggctgtcatgccaacaaaagaactagca
gacatcctagacacacaaccagaggaagacggagggctggtgtttagtgaggaggacaag
aatggcatgatcattcaggatgttatagaagacggagcagctgcaatggagggtaatacc
cagccaggagacagagtgatggtagtagacaatgaagtgtcgcagggcctctctgtagag
aaggtaacatcactactgagcaaagcaaagagctcagggaagctcactctctgtacagaa
agccacgccctaatatcagccagtcagacacggagactatcagacccaggggtggtcact
agcataccactgtccttgacaccaccagaaatggaatcaatcaagagttccagccgatca
tcaacccctgcgaccttggcttccgatcccgtgacctgccccataatccctggttgtgag
actaccattgacatttctaaaggacgaacaggactcggccttagcattgtgggtggctgt
gacacactgctgggcgctataataattcatgaggtgtatgaggaaggtgctgctgctaaa
gatggaagactctgggcaggagatcagattctagaggtgaacggtattgacctgcgtaca
gcatcccatgatgaagcaataaatgtattgaggcagactccacagcgagtgtgtctgact
gtgttccgtgatgaagcgcagtataaagaggaagagctgtgggatgttctgtcagtggag
ctgcagaagaaaccaggccaaggccttggacttagtatcgttggaagaaggaatgatacc
ggtgtgtttgtgtcggacattgtgaagggaggcatcgtggagagtgatggccggctcttg
cagggagatcagattttgtctgttaatggtgaagatgttcgcatagcaacacaggagtcc
gttgccgccctgctgaagtgttgtgtcggcccaatcacactggaggtggctcgctttaag
gcagggccgttccactcagagagacgcctgtctcagggcagtcagatcagcgaaggtgga
agctttaaagccagccagctgtctttcactggttctggcaaatcacaagaagactatgag
gacaacttcagaagtcaggaatcactggaccaagacttccgaactctggagctctgcaag
agtccctctgagtccctaggaataagcatagcaggcggagtgggcagtcctctgggtgat
gtgcctatcttcatcgccatgatgaacccagctggtttggctgcacagacacagaaactc
agagttggcgacaggatcatatcaatctgtgacacatctacagaaggcatggcccatagc
caagctgtgtcactgttaaaaaccaccactggaaccatacgcctgcaggtcgtcggaggt
gataccacagtaacaggtcctgctctagatcaaacatctggactcaccagcagcagcatc
ttccatgatgacctgggtcctcctcagtgtaagactattagtctggaaagagggccagac
ggcttgggcttcagtatagtgggaggattcggcagcccccatggcgatctgcccatctat
gtgaaaactgtttttgggaagggtgcagccgcagaggacgggcgtctaaaacgcggcgat
cagatagtcgcagtcaacgggcagagtttagagggcgtcacgcacgaggaggctgtcggt
attttaaaaaaaaccaaaggaacgatcacactcactatactctcatag
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