Silurus meridionalis (southern catfish): 124381296
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Entry
124381296 CDS
T08004
Symbol
lrrtm1
Name
(RefSeq) leucine-rich repeat transmembrane neuronal protein 1
KO
K16665
leucine-rich repeat transmembrane neuronal protein 1/2
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
124381296 (lrrtm1)
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Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
LRR_9
LRR_14
LRR_LRWD1
LRR_NXF1-5
HemY_N
DUF4750
EphA2_TM
Motif
Other DBs
NCBI-GeneID:
124381296
NCBI-ProteinID:
XP_046698731
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Position
28:16022780..16025914
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AA seq
524 aa
AA seq
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MLMDFLLIGLYLKWTLRKPPGLLLCSLGILLKMIPLVGGSCPRLCRCDSRLLYCEGLNLT
DIPHNLSSATGLSLRENNISELREGHFFSLSQLTWLYLDHNNIEYVEENAFERLRRIKEL
DLSSNRIESLSNGTFRPLPNLRILDLSYNRLQSLEPDLFHGLRKLTNLHLRYNALKFVPV
RIFQDCRSMQFLDLGYNQLQSLARNSFAGLFKLTELHLEHNELVKINLAHFPRLISLRTL
YMRNNKATIVVSTLDWTWHFLEKIDFSNNDIEYIEPHVFESVPNLKELMLDSNKLTYVDQ
RILGSWTSLGSITLSGNAWECSRNVCALASWLSSFQGQRDSALQCTSPDMAQGEDILDAV
YAFQLCEDGIEATTQTYTTTRDLARGSIFKGPTRTPYDLQDIEGGEVVTNSFTVTAATDD
PESTMQIHKVVTGTMALIFSFLIVVLMLYVSWKCFPAGVRQMRQCFSNQRRKQKQKQTMQ
QMDTMSTPEYYVDYKPNHIEGALVIINEYGSCTCQQQASRECEV
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgctgatggatttccttctaattggtctgtatttaaagtggacgctaagaaagccccct
gggttgttactgtgctctctgggcatccttttgaaaatgattcccctggtaggggggagc
tgtccgaggttgtgccgctgcgacagcaggctcctctactgcgaggggcttaacttgacg
gacattccgcacaatctgagcagcgccaccggcttgtccctgcgggagaacaacatctcg
gagctgcgcgaggggcatttcttcagcctgtcgcagctcacctggctttacttggatcat
aacaacattgagtacgtcgaggagaatgccttcgaaaggctgaggaggattaaagaattg
gacctaagttccaatcgaatcgagagcctgtctaatggaacctttagacccctacccaat
ttgcgcatcttggatttatcctacaacagattacagtccttggagccagaccttttccat
ggacttaggaagcttaccaatttgcatttacgctacaatgccctaaaattcgtgcctgta
cggatcttccaggactgcagaagtatgcagtttctggatttggggtacaaccagctgcag
agcctggcccgaaactcattcgctggtctttttaagctgactgagctgcatctggagcac
aatgagctggtgaaaataaaccttgcccactttccccgcctcatctcgctgcgtactctc
tacatgcgtaataacaaggccaccattgtggtcagcaccctagactggacatggcacttc
ctggaaaaaatcgatttctcaaacaacgacattgaatacatcgagccacatgtctttgag
agcgtgccaaacctcaaggagcttatgctggactcgaataagctgacatatgtggaccag
cgcattttaggctcctggacatccctgggaagcatcaccttgtcaggaaatgcatgggaa
tgcagccgcaatgtctgcgccctggcctcctggctgagcagcttccagggccaacgtgac
agtgccttgcaatgcaccagcccggacatggcccaaggcgaggacatactggacgctgtt
tatgccttccagctatgcgaggacggcattgaggccaccacccagacctacaccaccact
agagacctggcccgaggctccatttttaaaggtcccaccaggacaccatatgacctgcaa
gacatagaaggtggcgaggttgtgaccaattcctttacagtgaccgcagctaccgatgac
ccggagagcaccatgcaaatccacaaggtagtgacaggcaccatggcactcatcttctca
tttttgattgtagtgctcatgctttatgtgtcttggaagtgtttcccagctggtgtgagg
cagatgagacagtgtttcagtaaccagcgacgcaagcaaaagcaaaagcagaccatgcag
cagatggacacaatgtctactcccgaatattatgtcgactacaagcccaaccacatcgag
ggggccctcgtcatcatcaatgaatacggatcctgcacatgccagcaacaggcatctcga
gagtgcgaggtgtga
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