Silurus meridionalis (southern catfish): 124381302
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Entry
124381302 CDS
T08004
Name
(RefSeq) zinc finger and BTB domain-containing protein 5
KO
K10492
zinc finger and BTB domain-containing protein 5
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeo03000
]
124381302
04121 Ubiquitin system [BR:
smeo04121
]
124381302
Transcription factors [BR:
smeo03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
124381302
Ubiquitin system [BR:
smeo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
124381302
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTB
zf-H2C2_2
zf-C2H2
BTB_BTBDG
zf-C2H2_4
Zf-C2H2_ZNF451_2nd
zf-C2H2_3rep
BTB_SANBR
BTB_KLHL33
zf-C2H2_15
C2CH-3rd_BIRD-IDD
Motif
Other DBs
NCBI-GeneID:
124381302
NCBI-ProteinID:
XP_046698766
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Position
28:complement(3451629..3459431)
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AA seq
658 aa
AA seq
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MDFPGHFEQIFQQLNYQRVHGQLCDCVIVVGSRHFKAHRAVLAACSTHFRALFSVSEGDG
SVSVIRLDSEVVTAEAFSVLMDMMYTSTLTLGESNVMDVLLAASHLHFNTVVKACKHYLN
TRTLPKSPLGEHGAQRVEQQQLNTGSNSRLQRSFLLQQLGLSVVSSALNEEAEVEASAAC
RGKGSVTGGGLLDQRDSFYPQRRLQKRKQTFFLIRPETESSRQRPRLPTQAQGMVEDCGE
EGARGEELLSPDSHSKTLDEDSKREVVVIASDERDEYRRAVAQDDAQLPSQSDGGRGSRV
EPHLLVHKEEYPDGDGVQVKGGGEEEAPRMQVAVKREPISSPEPADETSDVMSQAEGSDQ
VEAVREKLELSPEGSEHSFSDPQPSSDILISEIKGPVMEGERAGDSGGGVDRRERGSGLL
SAMNFDRLSSSNPATGECALDHEPSRFLFGSDSSSSMHLPASQNLLAGEAQEFSNMRADT
LLLQPMLDGIASSSSEQLALEFQRNIFRASTYRFPPYRRIAPKCIPGAASMQDAASSSSS
SLIGSDASFDASTQRGSNLNPLPQLTRASADVLSKCKKALSEHNVLVVEGARKYACKICC
KTFLTLTDCKKHIRVHTGEKPYACLKCGKRFSQSSHLYKHSKTTCLRWQTSSMTAGLL
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggacttcccgggacactttgagcagatcttccagcagctgaactatcagcgtgtccac
gggcagctgtgcgactgcgtgattgtggtaggcagccggcattttaaagctcaccgtgcc
gtcctggctgcgtgcagcacacactttcgcgcactcttcagcgtctccgagggtgacggt
agcgtgagcgtgatccgtctggactccgaagtggtgacggccgaggcgttttcggtgctc
atggacatgatgtacacgtccacgctgaccctgggagagagcaacgtgatggacgtgctg
ctggctgcctctcatttgcatttcaataccgtagtgaaggcatgcaagcattatctaaac
actcggactctgcccaagtcgcctctgggtgagcacggggctcagcgtgtcgagcagcag
cagctgaacactggttctaactcacgcctccagcgctcgttcctcttgcagcagctcggg
ttaagcgtagtcagctcggcccttaacgaagaggcggaggtggaagcgagtgcagcatgc
cgagggaagggctcggtcacgggaggtggattgttggaccagagggactctttctacccg
cagcgccgcttgcagaagcgcaagcagacgttttttctgatccgccctgagactgagagt
tcacgacagaggccacgcctcccgacacaagcccagggtatggttgaagattgtggggag
gaaggagctagaggggaggagcttctctccccagattcgcacagcaaaaccttggatgag
gattccaaacgggaggtagtggtaattgcatctgacgagagggacgagtacagacgggcg
gtggcacaagacgatgcacagctccctagccaatcggatggcggcagagggagcagggtg
gagcctcacctgctggtgcacaaggaggaatatccagatggcgacggcgtacaagtgaaa
ggcggaggtgaggaagaagcgccacgcatgcaggtggcggtgaagagggagcccatcagc
tcacctgaaccggcagacgagaccagcgatgtcatgtctcaggctgagggcagtgaccag
gtggaggccgtacgagagaagctggaactgagccccgaaggcagcgagcacagcttcagt
gaccctcagcccagctccgacatcctgatctcagaaatcaaagggccggtcatggaagga
gaacgagcgggtgatagcggaggaggtgtagaccgcagagaaagaggatcaggtctcctg
agcgccatgaacttcgaccgtctctccagctcaaacccggcgacaggggagtgcgcactg
gaccacgagccgtcccgtttcctgttcggctcagactcctcttcttctatgcacctccct
gcgtctcagaacctcctcgcaggggaggcgcaggagttttccaacatgcgagccgacaca
ctgctgcttcagccgatgctggacgggatcgcgtcgtcctcctccgagcagctggcgtta
gagtttcagaggaatatctttcgtgccagcacgtacaggtttcctccttaccgacggatc
gcacctaagtgcatcccaggagccgcttcgatgcaggacgccgcttcctcttcctcctca
tcgctgatcggcagcgacgctagttttgacgcttctacgcaacgaggaagcaacttgaat
ccgctgccccagctgacccgcgcgtcggcagacgtgctctccaaatgcaagaaagcgctc
tcggagcacaacgtcctggtggtggagggagcacgcaaatacgcctgtaagatctgctgt
aagacttttctgaccttaacggactgcaagaaacacatcagagtccacacaggcgagaag
ccttacgcttgcctgaagtgcggcaagcgattcagccaatccagtcacctgtacaaacac
tcgaaaaccacctgcctccggtggcagaccagctccatgacagctggactgctttag
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