Silurus meridionalis (southern catfish): 124381328
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Entry
124381328 CDS
T08004
Symbol
trim45
Name
(RefSeq) tripartite motif-containing protein 45
KO
K12021
tripartite motif-containing protein 45
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smeo04121
]
124381328 (trim45)
Ubiquitin system [BR:
smeo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
124381328 (trim45)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filamin
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-RING_5
ANCHR-like_BBOX
RING_XB3-XBAT31
zf-C3HC4_3
zf-C3HC4_4
Invasin_D3
Ig_GEX2_N
OVT1
Motif
Other DBs
NCBI-GeneID:
124381328
NCBI-ProteinID:
XP_046698826
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All DBs
Position
3:11924489..11942704
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AA seq
600 aa
AA seq
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MWSVCRTDFVGVIISLKKGDWRKDFTMSASVKKAAHEEVKDIGTDTESNGNVSSSRAFCR
VCKRMYREPKLLSCLHTFCADCIRQLEAFSPLSEAPARDRDRVRERVLCPECDSVVELPR
SGVDALTTDHLALDEVFMETLLLEKCAVCDLCGDAEARQRCAVCSLNLCDFCSQAHRRQK
RTSSHAIQSLEELKRQGHLSRPVLCSQHPGQELRLFCETCDLTICMECAAAFHKDHRCSP
LHEVIHQHGDRIRELVSRNLRPRLFRLEEALRCVQVSQNALQSRAEAMSNEIQAFAQAYT
NAVQTHCRSLLHSLEDLRLQRRNQLQLQKVQLQQALCDIRGSVDFAERLLTCGSEAEILS
VKGVTTRRLMSLIELGYDPHLTSVSHDIGGSICFLPQELAGDVDGFPMVGVLQAKTVDPS
KCSIQGEGVQQCIEGQKREFTLVCRDSAGELMAKGGDSVLVSIIHTEKKECKVETAVIDN
NDGSYTVSYTPREPGSYSVWVCVKAQHVKGSPFGLTVKRKIQRHRGIFHCCSFCSSGGAK
EARCGCPGTMPGGFQGCGHGHKDHPGKPHWSCCGSVKESSECLRSLESGSQQGHVRTVEL
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgtggagtgtttgtaggacagactttgttggtgtaataattagtttaaaaaaaggtgat
tggagaaaagattttacgatgtcggccagtgtgaaaaaagctgcccatgaagaggtgaaa
gacataggaacggacaccgagtcgaacgggaacgtgagcagctccagggcgttttgtcgc
gtgtgtaagcgcatgtaccgcgagcccaagctgctgtcctgcttgcacacgttttgcgcg
gactgtatccggcagctggaggcgttttccccgctgagtgaagctccggcacgggaccgg
gaccgggtgcgggagcgcgtgctgtgtcccgagtgcgacagtgtggtggagctgccgcgg
tccggcgtggacgcactcaccacggaccacctggcactggacgaggtgttcatggagacc
ctgctgctggagaagtgcgccgtgtgcgacctgtgcggggacgccgaggcccgtcagcgc
tgtgcggtctgcagcctcaacctgtgtgacttctgcagccaggcgcacaggagacaaaag
aggacttccagtcatgccattcaaagcttggaagagctgaagcgccagggccatctttcc
agacccgtgttgtgttctcagcacccgggccaggagttgcgtctcttctgcgagacatgt
gatctcaccatttgcatggaatgtgctgctgcttttcacaaggaccatcgctgcagtccc
ctgcatgaggtcatacatcagcacggcgaccgtattcgagagctggtttccaggaacctg
cggcctcgtctttttcgtctggaggaggcattgaggtgcgtgcaggtttcccagaatgct
ttgcagtctcgggcagaggcgatgtcaaatgagatccaggcctttgcacaagcctacacc
aacgctgtgcaaactcactgccgttctcttctgcactctctggaggatctgagacttcaa
aggcgcaatcagctccagctgcaaaaggtgcagttgcagcaggcattgtgtgatatccgt
ggcagtgtggactttgctgaacgcttgcttacgtgtggctcggaggcagagatcctcagt
gtaaagggagtaaccacaaggcggttaatgagcctgatcgaattggggtatgacccacac
ttgaccagtgtcagccatgacattggtggcagtatctgtttcttaccacaggaacttgca
ggtgacgtggacggatttccaatggtaggagttctgcaggccaagaccgtagatcccagc
aagtgctccattcaaggagaaggtgtccaacaatgtattgagggccaaaagcgtgagttc
acactagtctgcagggactctgcgggggaactgatggccaaaggaggagactctgtgtta
gtcagtattatccacacagaaaagaaagagtgcaaagtggagacagcagtgattgataat
aatgatgggtcgtatacagtctcctacacgcccagggaacctggatcctactctgtgtgg
gtttgtgtcaaagcacagcatgttaagggttcgccttttgggctgactgtgaagagaaaa
attcagcgacaccgtggaatcttccactgctgctctttctgctctagtggtggcgccaaa
gaggcacgatgtggctgtcctgggaccatgccaggagggttccagggctgtggtcatggc
cacaaagaccacccagggaagccacactggtcctgttgtggtagtgtgaaggagagctca
gagtgtttgcgcagtctggagtcaggctctcagcaaggacatgtccgaactgtggaactc
tga
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