KEGG   Silurus meridionalis (southern catfish): 124381343
Entry
124381343         CDS       T08004                                 
Symbol
kdm4c
Name
(RefSeq) lysine-specific demethylase 4C isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
smeo  Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:smeo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:smeo03036]
    124381343 (kdm4c)
Enzymes [BR:smeo01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     124381343 (kdm4c)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     124381343 (kdm4c)
Chromosome and associated proteins [BR:smeo03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    124381343 (kdm4c)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H PHD_2 JmjN PHD Tudor_5 PHDvar_NSD LBR_tudor Rad9_Rad53_bind DUF7141
Other DBs
NCBI-GeneID: 124381343
NCBI-ProteinID: XP_046698842
LinkDB
Position
28:2493951..2520296
AA seq 1251 aa
MAGVGANASANPACKIMTFHPTMEEFRDFNKYLVYMESQGAQRAGLAKVIPPKGWKPRRT
YDDIDDLVIEAPIQQMVAGQSGLFTQYNIQKKPLSVQEFRRLANSDKYCTPRYLNYEDLE
RKYWKNLTFVPPIYGADVSGTLYDEDVEEWNIGHLNSILDVIEEDCGVSIQGVNTPYLYF
GMWKTSFSWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLATGFFPNSFKSCEAFL
RHKMTLISPSVLKKYSIPFDRITQEAGEFMITFPYGYHAGFNHGFNCAESTNFASLRWID
YGKLAVQCTCSKDMVKISMDPFVKRFQPDRYQLWTQGKDTCSIDHTLATPSSTPELQTWL
QRRRRTKTNKRASYPCTRSKRLKTVQPSLVTENAARRTSDHEEKEEEDQIPHDASRVSEG
PASLCQQICFVKVTRVESNLLAQSSERVRPQAPPPAREASGSRKALTSAVEAPGSAMDDT
PERVSRSSSNRGKANPSAVKLTGTPGTRESAEHSGAPSSDMPLLTPEVTEDPEGRKSPNM
SSEMPLLTLAVQSGENNTVPRSREPEKSASGHLGEASSKASLLNWCSNPSQDVGRSLGSD
PDANKELHRRKKRDRGRSVSNISHYPESSTELSRSSSVKDSLSSFTTTTESPSTSYDPTP
LDEADFTSSALPNLFEDWKNMSYQNAEDLTVPYALWEEPRCQQVKCPDPSDFLEKSLTFT
DLESSAVHRSGTELLGSPDRPSRSDSSSESGEENSMSETEYGDSGTEPGEIRIQYTTPMA
KRKTTKSWRHPLRKPTARAVPSAVKQQDNSDDEPIEECSAEEEMPEAEVWARPLVHLWHS
RKSHFPSEKEYNIAAAKAAPHCAICTLFMPYYQPEETKDECRPEATARSRPLIPEICFAY
REGSCPPNTLLEEDGSSPLVACQRCCVQVHASCYGVATHDVTQEWTCDRCSCGDLSAECC
LCNLRGGALKRTTDNRWAHVICAVGLPEVKFIDVVKRSPIDISAVPAQRYKLKCIYCHKR
MKKLAGACIQCSCGRCPTSFHVTCAHAAGVAMEPDDWPYVVFIVCHRHQSRSSGTKSRVS
RTELKQGQTVIAKHKNLRYYSCRVANVTAQTFYEVMFDDGSFSNDTFPEDIVSRDCVQLG
PPEVGEVVQVKWPDGLFYEAKYLGSNTTYMYQVEFEDGSQVLAKREDIYTLDEDLPKKVK
GRLSTASSMRFEDTFFTTQSESKRQRTPNSRFQNDYVADPNPRTSTCSKTN
NT seq 3756 nt   +upstreamnt  +downstreamnt
atggcgggtgtcggggcgaacgcctccgcaaatcccgcctgcaagattatgacctttcac
cccaccatggaggagttccgggatttcaataagtatctggtgtacatggagtctcaggga
gcgcagagggccggtctggcgaaggtgatcccgccaaagggctggaagccgagacgcacc
tacgacgacatcgatgacctggtgatcgaagcgcccattcagcagatggtggccggccaa
tcagggctcttcactcagtacaacatccagaagaagccgctgagcgtgcaggagttccgc
aggctggccaatagcgacaagtactgcacccctcgctacctgaactacgaagatctcgag
aggaagtactggaagaacctgacgttcgtgccccccatatatggtgcagatgtgagcggg
acgctgtacgacgaggacgtggaggagtggaacatcggccacctgaactccatcctggac
gtgatcgaggaggactgcggcgtctccattcaaggtgtgaacaccccctacctgtatttc
ggcatgtggaagacgagcttctcttggcacacggaggacatggacctctacagcattaac
tacctgcacttcggagaacccaagtcctggtacgccattcctccagaacacggaaagaga
ctggagcgattagctacaggttttttccccaacagctttaagagctgtgaagcttttctc
agacacaagatgaccctcatctcaccttctgtcctgaagaaatacagcatcccgtttgac
aggataacgcaggaagccggcgagttcatgatcacgtttccgtacggctaccacgccggc
ttcaaccacggcttcaactgcgccgagtccaccaacttcgccagcctgcgctggatcgac
tacgggaaactcgccgttcagtgcacatgcagtaaggacatggtgaagatctccatggac
ccgttcgtgaaacgtttccaaccagaccgctatcagttatggacgcagggtaaagacacc
tgctcgatagaccacaccctggccacgcccagctccacgcccgagctccagacgtggctc
cagagacgccgcaggacaaaaaccaacaagagggcgagctacccgtgcacacgctccaaa
cgactgaaaaccgtgcagccgtcgctcgtcacagaaaacgccgcgagacggacgagtgac
cacgaggagaaagaggaggaggatcaaatccctcacgacgcatcgcgcgtctcagaaggg
cccgctagtctgtgccaacagatctgcttcgtcaaggtcacacgagttgagagcaattta
ttggcccagtcgtctgaaagagtccggccccaagccccgccccctgcaagagaagcctca
ggatccagaaaggctctaacctctgctgttgaagctcccggttctgctatggatgacacg
cctgaacgcgtttccagatcctcatcaaaccgcggtaaagcgaatccgtctgccgtaaaa
ctcaccgggacaccaggcacccgtgaatccgcagaacattccggagctccttcatctgac
atgcctctcctcactcctgaggtcacggaggatcccgagggaaggaaatctcccaacatg
tcgtcagaaatgcctttactaaccctcgcagtccagtccggggaaaacaacacggttccg
cgttctagagaaccggaaaaatccgcctcgggtcatcttggtgaagctagctccaaagct
tctttactcaattggtgctcgaatccgtcacaagatgtcgggagatctctcggctctgat
ccggatgctaacaaggagctccacaggaggaaaaaaagagatagaggtagatcagtgtcg
aatatctcgcattacccagaatccagtactgaactttccagaagtagctcggtgaaggat
tctttgtcttcgttcaccaccaccacggagtctccttccacgtcttacgacccgacccct
ctcgacgaagccgacttcacgtcttctgcattacccaacctctttgaagactggaagaac
atgagctaccaaaacgcagaagatctcacggtgccttatgccttgtgggaggagcctcgg
tgccagcaagtaaagtgccccgatccttctgactttctggagaagagcctaacgtttact
gatctggagtccagcgcggtccatcgctcaggcacggagctcctcggttctccggacagg
ccctcgaggtcggacagcagcagcgagtccggcgaggagaactccatgagcgagacggag
tacggagattcgggaaccgagccgggcgaaatccgtatacagtacaccacgcccatggcc
aagagaaagacgaccaaaagttggcgccaccctttgaggaaacccactgccagggcggtt
cccagtgccgtcaagcagcaagacaacagtgatgatgaacctatagaggagtgcagcgcg
gaggaagaaatgccggaggccgaggtctgggcgagacccctggttcatctgtggcacagc
aggaagtctcacttcccgtcggagaaggagtacaacatcgcggcggcgaaggcggcgccg
cactgcgccatatgcacgctgttcatgccgtactatcagcccgaagagacgaaagacgaa
tgcaggccagaggccacggcgaggtcgcgacctctgattcctgaaatctgcttcgcgtac
cgcgagggctcatgtcccccaaacacactcctggaggaagatggatccagtcctctcgtg
gcctgtcaacgctgctgcgttcaagttcatgccagttgctatggcgtcgctactcatgat
gtcactcaggagtggacatgtgaccgatgttcgtgtggggatctgagcgctgaatgctgt
ttatgtaacctgagaggtggtgcattgaaaagaacaacagacaacagatgggcccatgtg
atctgtgctgtgggtcttcctgaggtcaaattcattgacgtggtcaagaggagtcccatc
gacatcagcgccgtccctgcacagagatacaagctgaagtgtatatactgtcacaaacgg
atgaagaagttggcaggcgcttgtatccagtgctcctgtgggcgttgcccgacctccttc
cacgtcacctgcgctcacgccgcgggcgtcgccatggagccagacgactggccgtacgtg
gtgttcatcgtctgccacagacaccagtcacggagctccggcaccaaatcgagggtgagc
cgaacagagctgaagcagggccaaaccgtgatcgctaagcacaagaacctgcgctactac
agctgccgcgtggcgaacgtcacggcacagaccttctacgaggtcatgttcgacgacgga
tccttcagcaacgacaccttccctgaagatattgtaagcagagactgcgttcagctcgga
ccaccggaagtcggcgaggtcgtgcaggtcaagtggcccgatgggcttttttatgaggct
aaatacctgggctctaacaccacgtacatgtatcaggtggagtttgaagatggttctcag
gtcctggctaagagagaggacatttacactctggatgaagacctgcccaaaaaagtcaaa
ggccgtctctctacagcttccagtatgcggtttgaagacactttcttcaccactcagagt
gagagtaaaaggcagcgcacaccaaactctcgtttccagaacgactacgtggctgatcca
aatccccgcacgtccacctgcagcaaaactaactga

DBGET integrated database retrieval system