Silurus meridionalis (southern catfish): 124381344
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Entry
124381344 CDS
T08004
Symbol
zcchc7
Name
(RefSeq) zinc finger CCHC domain-containing protein 7
KO
K12597
protein AIR1/2
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124381344 (zcchc7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smeo03019
]
124381344 (zcchc7)
03016 Transfer RNA biogenesis [BR:
smeo03016
]
124381344 (zcchc7)
Messenger RNA biogenesis [BR:
smeo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
124381344 (zcchc7)
Transfer RNA biogenesis [BR:
smeo03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
124381344 (zcchc7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
124381344
NCBI-ProteinID:
XP_046698847
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All DBs
Position
28:complement(2506073..2556318)
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AA seq
579 aa
AA seq
DB search
MFSGNTEREEYEDELYAEEEDDGDSEPDSDLEFQLYSQLHYCTDDQEKLPENQQSSGHEA
QEAQEPGQRVQLHAAPPDDAILIDSGTDVITVSDNTEEEESVCAGKGQRSKGKGATPVPQ
LQHHLLENVVVLDSESDQSSDSGLIPPYVVDPDLDSDSDSDSDGLESWMILGREKEEGDQ
DIQLNVFTVRNRDESEFVHVVEGEQNWTVSNKDKEAQIFNKGAGSRRVSNRYYTEKTVTC
HNCNKLGHLSKNCPIPKKALCCSLCGLQGHFVKSCPNRHCSNCALPGHTYDDCLERAYWH
KRCHRCSMTGHFADACPDIWRQYHLTTTEGPPVQSLHPEAHRSTAYCYNCSRMGHFGHEC
TERRMFNGTYPTLPFSSSYDTHYDIKRREHRAHLRAKELQEAGLLDRAEAAPTPQPPRKK
WKNTHFPSAPLPRTPHTHTPKRRIAHTPKHPPQTTPKHNTHLHWRQDTPGPNRKKNTNTT
PMSNCPYSATAARFDGKKKKKNKNPNATNEEQDFPRGFQKSPRNNGALIHTPGRGRKNPG
GLFGSEKSKKKKRTEKKRARKAARDPENLFLIKQRKRST
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgttctcaggaaacacggagcgtgaggaatacgaagacgagttgtatgccgaggaagag
gacgatggcgactccgagcctgacagcgatctcgagttccagctctattcccagctccac
tactgcaccgatgaccaggagaaacttcccgagaaccagcaaagctctggacatgaggct
caggaagctcaagaacctggccagagagtccagcttcacgctgctcctcctgacgatgct
attctgatcgactcgggcacggacgtcataacggtctcggataacaccgaggaggaggag
agcgtgtgcgccgggaaaggtcagaggtcaaaagggaagggggcgactcctgttccacag
cttcaacatcacctcctagaaaacgtggtggtcctggattcggagtcggaccagagctct
gattcgggattgattccgccgtatgtggtggatcccgatttggattcggattcagactcg
gattcggacggattggagagctggatgattctcggtcgggaaaaggaggaaggagaccag
gacatacagctcaacgtcttcacagtgcgcaaccgggacgagtcagagtttgtccacgtc
gtagagggcgagcagaactggaccgtctcgaacaaagacaaggaggctcagatcttcaac
aaaggtgcaggctcgaggcgcgtctcaaatcgctactacactgagaagacggtcacctgc
cacaactgcaacaagctcgggcacctctccaaaaactgccccattcccaagaaggcactg
tgctgttcgttgtgtggtctccagggccactttgtgaagagctgtccgaaccgtcactgc
tcgaactgcgcacttcctggtcacacgtacgacgactgcctggagagagcgtactggcac
aagcgctgccaccgctgctccatgaccggccacttcgccgacgcctgccctgacatctgg
aggcagtaccacctcacgacgacagagggtcctccggtccaatccctccatcctgaggct
cacagatctactgcgtactgctacaactgctctcggatgggacacttcggccacgagtgc
acagagaggaggatgtttaacggaacctatcctacgctgcctttctcctcctcgtacgac
acacattacgacatcaagcgtcgagaacatcgagctcacctccgggccaaagagctacaa
gaagccggactcctcgatcgggccgaagccgctccgactccgcagcctcccaggaagaaa
tggaaaaacactcatttcccctcagcgccgctccctcgcacgccccacacacacaccccg
aagagacgcatcgcccacacgccgaaacacccccctcagaccacgcccaaacacaacaca
cacctgcactggcggcaggacacgcccggtccgaacagaaagaagaacaccaacaccacc
cccatgtcgaactgcccttacagcgccaccgcggcccgtttcgatggcaagaaaaagaaa
aaaaacaagaacccgaacgctaccaacgaggaacaggacttcccccgaggcttccagaaa
agtcccagaaacaacggagcgctcattcacacgccaggcagaggccggaaaaaccccggg
gggctgttcggctcggaaaagagcaagaagaagaaacgcactgagaagaaaagggcgaga
aaagcagcaagagaccccgaaaacctgtttctgatcaaacaaaggaagcgaagtacatag
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