Silurus meridionalis (southern catfish): 124381345
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Entry
124381345 CDS
T08004
Symbol
pax5
Name
(RefSeq) paired box protein Pax-5 isoform X1
KO
K09383
paired box protein 5
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeo03000
]
124381345 (pax5)
Transcription factors [BR:
smeo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
124381345 (pax5)
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Gene cluster
GFIT
Motif
Pfam:
PAX
Pax2_C
HTH_23
HTH_32
DUF6115
HTH_Tnp_IS1
Ribosomal_S13_N
Motif
Other DBs
NCBI-GeneID:
124381345
NCBI-ProteinID:
XP_046698853
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Position
28:2556543..2612214
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AA seq
402 aa
AA seq
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MDLDQKAPPGRIGRSGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRV
SHGCVSKILGRYYETGSIRPGVIGGSKPKVATPKVVDKIADYKRQNPTMFAWEIRDRLLA
ERVCDNDSVPSVSSINRIIRTKVQQQPGQSGSVSAHNLVSTVAVTQVSAVTSDAAGSSYS
ISGILGISSPADASKRKRDENLQDSSLANGHAHSGRDFLRKQMRGELFTPQQLEVLDYVF
DPDIYPTPDTNKPGQTADYSAMASLAGGLEEMKSSLANQTAVDLGQSVAGPQSYPLVSGR
DLGSTTLPGYPPHVPPAGQGSYSAPSLTGMVPGGEFSGSPYSHPQYSTYNESWRFANPSL
LVFQQEYGSLLGSERAASSGLFPSQTTQPADTVSSFLRLLAE
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggacttggatcagaaagctccaccagggcgcatcggacggtcggggcacggaggggtg
aaccagcttggaggggtgtttgtgaacggccggccgttgcccgacgtggtgaggcagagg
atcgtagagctggcacaccaaggcgtacggccatgcgacatttctcgccagcttcgcgtc
agccacggctgtgtcagcaagatcctgggcaggtactacgagacggggagcatcagacca
ggcgtgatcggaggatccaaaccaaaggttgctacacccaaagtcgtcgacaaaatcgct
gattataaacggcaaaaccccaccatgtttgcctgggagatacgagacaggctactggct
gagagagtttgcgacaacgatagcgtgcccagcgtcagctcaatcaacaggatcattcgc
actaaagtccagcagcagcctggccaatcaggaagcgtctcagcgcataatttagtgtcc
accgttgccgtgacccaggtctctgcggtgaccagcgacgccgcaggctcctcctactcc
atcagtggaattctgggaattagctcgccggctgacgctagcaagagaaagagggatgaa
aatcttcaggattcttcgctggcaaacggccacgcccactcagggcgggacttcctgcgc
aagcagatgcggggggagctcttcacgccgcagcagctcgaggtactggactacgtgttc
gatcctgacatttatcctacccctgacaccaacaagcccggccagacagctgattactct
gcgatggcatctctggccggtggactagaagagatgaagagcagtctggctaatcagaca
gcagtggatttgggccagagcgtagcaggacctcagagttaccctctggtgtcaggtcgt
gatctaggcagcaccacacttccaggttaccctcctcatgtacccccggccggccagggc
agctactcggccccgtcgctcacaggaatggtgcctgggggcgagttttcgggcagtcca
tactcccatccgcagtattctacgtacaacgagtcgtggaggttcgccaacccgagcttg
ctggtgtttcagcaggagtacggttctcttctaggctcagaaagagcagcttcttcaggc
cttttccctagccagaccacacaacctgcagatacagtttcttcatttctgaggttgttg
gctgaataa
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