Silurus meridionalis (southern catfish): 124381356
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Entry
124381356 CDS
T08004
Symbol
vps37a
Name
(RefSeq) vacuolar protein sorting-associated protein 37A isoform X1
KO
K12185
ESCRT-I complex subunit VPS37
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124381356 (vps37a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124381356 (vps37a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smeo04147
]
124381356 (vps37a)
Membrane trafficking [BR:
smeo04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
124381356 (vps37a)
Exosome [BR:
smeo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
124381356 (vps37a)
Exosomal proteins of colorectal cancer cells
124381356 (vps37a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mod_r
UEV
UQ_con
Motif
Other DBs
NCBI-GeneID:
124381356
NCBI-ProteinID:
XP_046698880
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Position
28:complement(1204610..1210259)
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AA seq
398 aa
AA seq
DB search
MVFLRVSTGCQIRMNWIFPLSKGSGAIPPLNSLQKQRQRQIESLKAAHSTIAEIQKDVEY
RIPFTVNNSTISVNILLPPQFPQEKPVVTVYPPLGHHAVDGNNGTVVTSPLITNFGMHSD
LGKVIQSLLDEFWKSPPVLMSGGPSFPFMYKPPPYPAQNFHFVPAFPSQDPQRPGVAAPL
PPPQGSDPQQVQNRPPVPYGLISDLPLPVPMSDSQTGLNGYIYKMPEIPDSFLELSEMSV
SQLKDMSDNEDVLLEYFACLPQLKQVSSDKEDLVNTIVTVAKKNLQLEPQLEGKRQEILY
KYEQLTQMKSAFQTKMQRQHELSESCSLSALQARLKVAAHQAEEVSEETAENFLEGKSEI
DDFLTSFMEKRTLCHSRRAKEEKLQQSISLQGHFPSAH
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atggtctttctaagagtttccaccggatgtcagatcaggatgaactggattttcccgttg
tcgaagggctccggagcgattccgcctctcaacagcttgcagaaacaaaggcagcggcag
atcgagtcgctcaaagccgcgcattccaccatcgctgagatccagaaagatgttgagtac
cggattcctttcaccgtcaacaactcaaccatcagcgtcaacatattgcttccaccgcag
ttccctcaagagaagcccgtcgtgacggtgtaccctccactcggtcatcacgcggtggac
gggaacaacggcaccgtggtcaccagccccctgatcaccaacttcgggatgcactcggat
ctcgggaaagtgatccagagcttgctggatgagttctggaaaagtccgccggtcctgatg
tccggaggcccgtccttccctttcatgtacaagccgccgccgtaccctgcgcagaacttt
catttcgtccccgctttcccaagccaggacccccagcgccccggcgtcgccgcccctctc
ccaccaccccagggatccgacccacagcaggtgcagaaccgtcctcctgttccatatggg
ctgatctcagacctcccactccctgtccccatgtccgactcacagactggactgaacgga
tacatctacaagatgcccgaaatccccgactcgtttctggaactttctgagatgagtgtg
tctcagctgaaggacatgagcgataatgaagatgtgctgctggagtactttgcgtgtctg
cctcagcttaaacaggtctccagcgataaagaagacctggtgaacaccatcgtcactgtg
gccaaaaagaatctgcagctggagccacagctggaagggaagagacaggagatactgtac
aaatatgagcagctgacccagatgaagtcagcgtttcagaccaaaatgcagagacagcac
gagctcagtgagagctgcagcctgagtgcccttcaggcgaggttgaaggtcgctgcccat
caggccgaggaggtgtctgaggagacagcggagaactttctggaaggaaagagtgagatc
gatgactttctcaccagcttcatggagaagcggacgctttgtcacagtagaagagcgaaa
gaggagaaacttcagcagtccatctcactgcagggacactttccctctgctcactag
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