Silurus meridionalis (southern catfish): 124381389
Help
Entry
124381389 CDS
T08004
Symbol
zeb2a
Name
(RefSeq) zinc finger E-box-binding homeobox 2a isoform X1
KO
K23560
zinc finger homeobox protein 2
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeo03000
]
124381389 (zeb2a)
Transcription factors [BR:
smeo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
124381389 (zeb2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-Di19
zf-C2H2_6
zf-C2H2_jaz
Homeodomain
Zf-C2H2_ZNF451_C
zf-C2H2_15
zf-C2HE
Motif
Other DBs
NCBI-GeneID:
124381389
NCBI-ProteinID:
XP_046698949
LinkDB
All DBs
Position
3:30401163..30447101
Genome browser
AA seq
1189 aa
AA seq
DB search
MKPEIMAEGPRCKRRKQANPRRKNVLSSDEEDRLQGSEGEGSPVGVPSLEPSPRVAHALL
SCRGDEEDESHDIWQHTDLNGAERKDEYNPLSPDMSLHGAGNGTVKGIDATAELESFFTK
RKLEDNEGCPASIAEYLQRGDTAIIYPEDPEESTRLSTPEANGQEDNENDLTLRTPDDFA
QLLTCPYCDRGYKRLTALKEHIKYRHEKNEESFPCQLCSDTFAYRTQLDRHMATHRPSRD
QPPVLNEGAGNRKFKCTECGKAFKYKHHLKEHLRIHSGEKPYECSNCKRFSHSGSYSSHI
SSKKCIGLISINGRVRHGVGTKSGSSPNSAASSPGSPALAQLRSKLENSRCSGLQDPLAH
PDIKAEPMDFNECRLMMASPHEFGGPAAFLNGTGRGGSPLGIHNSSQNPLQHLAMRLDSH
ALGYTGLTNNLTKVQRVLQIVDNTVCRQKLDSNTEETSKLRAYMKDVGSQMEEHKLALAA
QAGFHAAGHNSPSKSIFDYTLEKVNEAKTSLQSLTEDAEKRALDIKKERPSHIIGGISDE
KAQDRDSQYTSFSCQYCKESFNGPIPLHQHERYLCKMNEEIKAVLKPNESLPVSRRGVSS
IEQQGVTVSSSMPDRNTTSPINPFKDHLSVLKAYFAMNTEPSSEELRKISIAVGLPQEFV
KESFIQWKAQSLHSLSRKRSPPPEWGSGESNHVLARESALARSPASIGHYSDSTAELQGT
TNGETGPRLSKHHQLSSIKHEKQVDSVDHMRGETPSPLNLSSTSSKHSYSSSYTPTSLTS
EDTHGEPLDLSLPKHLSKSDKKPKPNGFNMHSEVAVREQGTEPLDLAHIKKEFNGSNSVG
NENQLDKSSSPIFGINPFSGAPIYTPLPPHGAFPPSTFMSPAQASIPGLRPYPGLDPMGF
LPHMAYTYAAGAATFVEMQQRRKYQRKPGFQGELLDSTGDYLSGLEDLTDSELLLARKKI
KKTESGMYACDLCDKTFQKTSSLLRHKYEHTGKRPHQCQICKKAFKHKHHLIEHSRLHSG
EKPYQCDKCGKRFSHSGSYSQHMNHRYSYCKREAEEREAAKQESHENGGLLEPTELLMHH
AYLKGLAPLRFSDPEEQGEDMMRGSAILRDGKEDGSRDAEKVYPEVTDRREAMFREEEEE
MEEDRLESRSLDGIAKDEKANDVSGGTEDESSEERKAESKTDGENEDAD
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atgaagccggagatcatggcggaggggccgcgctgcaagaggcgaaaacaagccaaccca
agaaggaagaacgtgctgagctccgatgaagaagacagactgcagggttcggagggagag
gggagtccggttggcgttcccagcctggagccatcgccccgagtggcacatgccctcctt
tcatgccggggagacgaggaggatgagagtcacgacatctggcaacacacagacctcaac
ggtgcagagagaaaagatgaatacaatcctctgagccctgacatgtccctccatggagct
ggaaatggtacagttaagggtattgatgccactgcagagctggagagcttcttcaccaag
aggaagctggaggacaacgagggatgtcctgccagcatcgctgagtatctgcaacgaggg
gacacggctatcatttacccagaagacccagaggagagcacgaggctgagcactccagaa
gccaacgggcaggaagacaatgagaacgatctgacactcaggacgccagatgactttgcc
caactgttgacctgcccctactgcgaccgtggttacaagcggctgaccgccctcaaggaa
cacatcaagtaccggcatgagaagaacgaggagagctttccctgccagctctgcagcgac
acttttgcctaccgcacacagctggatcgccatatggccacccacaggccttctagggac
cagcctccggttctgaacgaaggggctggaaaccgcaagttcaaatgcaccgaatgtggg
aaagcgttcaaatacaagcaccatctgaaggagcacctccgcatccacagtggtgagaag
ccatacgaatgctctaactgtaagcgcttttcccactccggctcttacagttcacacatt
agtagcaagaagtgcattggcctcatctctataaatggacgggtacgacatggggttggc
accaagtctggctcatccccaaactctgccgcttcatcgccaggcagccctgccttggct
cagctaaggagcaaactggaaaacagcaggtgctctggtctccaggacccattagcccac
cctgatataaaggctgagcccatggacttcaatgaatgccgtcttatgatggcttcacca
catgaattcggaggacctgcggcttttcttaatggtactggccgtggggggagcccccta
gggatacacaattcgtcacagaaccccttgcagcacttggctatgagactggattcacat
gcattaggctacacaggcttgaccaataacctaactaaggttcagcgggtcctccagatt
gtcgacaacactgtgtgccggcagaagttggacagcaacactgaggagacctccaagttg
cgggcttacatgaaggatgtgggctcccagatggaagagcacaagttggcgctggcagcc
caggctggatttcatgcagctggacacaacagtcctagcaagagcatttttgactacacg
ttggagaaggtcaacgaggccaaaacttccctgcagagtctaaccgaagatgcagagaaa
agagcgcttgacattaagaaagagaggccaagtcatataattggtggcatttcagatgag
aaggcccaggatagggacagccagtatacatctttctcctgccaatactgcaaggagtca
tttaatggccccattccattgcaccagcacgagcgctacctttgcaagatgaacgaagag
ataaaagcagtcttgaaacctaatgaaagtttacctgtcagccgcagaggcgtgtccagc
atagagcaacagggcgttacagtgtcctcttctatgccagacagaaatacaactagccca
attaatccttttaaagatcacttgtcggtattgaaagcttactttgccatgaatacagag
cccagttcagaagaactgagaaaaatctccattgcagttggtcttccccaggagtttgtc
aaggaatcgtttattcaatggaaagctcaatctctccacagtttgtccagaaaaaggtct
ccacctcccgaatggggcagtggggaaagcaaccatgtcttggctagagaatcagcactt
gcaagatcgcctgcttctattggccattatagtgactcaacagcagaactccaaggtact
accaatggtgaaactgggccccggctatcaaaacaccaccagctatcaagcataaaacat
gaaaaacaagttgactcagtggaccacatgagaggtgagaccccatcacccctgaatctt
tcttcaacatcttcaaaacactcttatagcagctcctacacccctacaagtctcacctct
gaggatacccatggcgaacctctagacctgtcattgccaaaacatctgtccaaatctgac
aagaagccaaagccaaatggtttcaacatgcatagtgaggttgctgtgcgagaacaagga
acagaacctctggacttggctcacatcaagaaggagttcaacggctcaaacagcgtcggc
aacgaaaatcaacttgacaaaagttcaagcccaatctttggcatcaaccccttcagcgga
gctccgatttatacgcctctaccaccacatggtgcattccctccatctacgttcatgtcc
ccagcacaggccagcatcccaggactaaggccttacccagggcttgatcctatgggcttc
cttccacacatggcttacacttatgcggcaggagcagccacctttgttgagatgcagcag
cgacggaaataccagcggaaaccaggcttccagggggagctgttggacagcacaggggac
tatttgtcagggctggaggacctgacagacagtgagttgctgcttgcccggaagaagatt
aagaagaccgaaagtggtatgtacgcgtgtgacttgtgcgacaaaacattccagaagacc
agttccctcctaagacacaaatatgagcacacaggaaagcggcctcaccagtgccagatc
tgcaagaaggccttcaagcacaagcaccatctaatcgaacactcgcgcctgcactcgggc
gagaagccctatcagtgcgacaagtgcggcaagcgcttctcgcactcgggctcgtactcg
cagcacatgaaccatcgctactcctactgcaagagggaggcggaggaacgtgaggccgcc
aagcaggagagccatgagaacggtggcctcctagagcccacggagctgctgatgcaccac
gcttacctaaagggacttgcaccactgagattttctgatcccgaagagcagggcgaggac
atgatgcgaggaagcgccatcttgagagacggcaaagaggacgggtctagggatgcggag
aaggtctacccggaagtgacggacagacgagaggcaatgttcagggaggaggaggaggaa
atggaggaggataggttggagagccgaagcctggacggtatagcaaaagatgagaaagcg
aacgatgtatcaggaggaacggaagacgagagctcggaggagaggaaggcggagagcaag
acagatggtgagaacgaggatgccgattaa
DBGET
integrated database retrieval system
