Silurus meridionalis (southern catfish): 124381462
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Entry
124381462 CDS
T08004
Symbol
pdlim3a
Name
(RefSeq) PDZ and LIM domain protein 3a isoform X1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
124381462 (pdlim3a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
smeo04990
]
124381462 (pdlim3a)
Domain-containing proteins not elsewhere classified [BR:
smeo04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
124381462 (pdlim3a)
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GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
Arc_trans_TRASH
Motif
Other DBs
NCBI-GeneID:
124381462
NCBI-ProteinID:
XP_046699059
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All DBs
Position
28:complement(2066231..2074033)
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AA seq
310 aa
AA seq
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MTHYVVLDGPAPWGFRLIGGKDFNQPLIIAKISPGSKASMVDLSPGDIILAIDGICTDNM
MHCEAQNRMKQATRQLRLTIQRPETKLWSPRVKEGDRAHPFKLNLEAERQEYRPIGTGHN
RRATPFVAAANIDDKRQVVSSAYNSPIGLYSSGNIQDALHGQLRSLIQSKPESPKRLTSI
EESDVYRMLQREEGEKEPHEPRQSGSFKALQDYIDNEGTIPVVTKAVQAPVMKPLSPGGN
LHKLPMCDKCGNGIVGMVVKVHEKYRHPGCFVCSDCEENLKQKGYYIIDDEIYCETHAHA
RAKPPESPDL
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgacacactatgttgtactggatggaccggcaccatggggatttcggctgattggagga
aaggatttcaaccaacctcttattatcgccaagatatctccaggcagcaaagcctctatg
gtagacctttctcctggtgacatcattctggctatagatggcatctgcaccgacaacatg
atgcactgtgaagctcagaatcgcatgaagcaggccacacgacagctccgattaaccatc
caaaggccagaaaccaaactgtggtcacctcgggtcaaagaaggtgacagagcgcatcca
tttaaactgaacctggaggcagagagacaggagtacagaccaatcgggacgggtcataac
cgacgggccacacccttcgtggcggcggctaacattgacgacaagcggcaggtggtcagc
tctgcttacaactctcccatcggtctttattcttcaggcaatatccaggatgctttacac
ggtcagctcaggagcctgatacagagcaagccggagagtcccaagaggctcacgtctata
gaagaatccgatgtgtaccgcatgctacagagggaagaaggagaaaaggaacctcatgaa
ccccgccaatcaggatccttcaaagccttgcaggactacattgataatgaaggaacgatt
cccgtggtgacgaaggcagtgcaggcgcccgtcatgaagcctctctctcctggaggaaac
ctgcacaaacttcccatgtgtgacaagtgcgggaacggcatagttgggatggttgtaaaa
gttcatgagaagtatcggcaccctggctgttttgtctgctcggactgtgaggagaacctg
aagcaaaaaggctactatatcatagacgacgagatctactgcgaaactcacgcacacgct
cgtgcaaaaccacccgaaagtccagacctgtag
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