Silurus meridionalis (southern catfish): 124381468
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Entry
124381468 CDS
T08004
Name
(RefSeq) receptor-type tyrosine-protein phosphatase delta-like isoform X1
KO
K06777
receptor-type tyrosine-protein phosphatase delta [EC:
3.1.3.48
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
124381468
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
smeo01009
]
124381468
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
smeo04515
]
124381468
Enzymes [BR:
smeo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
124381468
Protein phosphatases and associated proteins [BR:
smeo01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
124381468
Cell adhesion molecules [BR:
smeo04515
]
Immunoglobulin superfamily
Type II RPTP family
124381468
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_2
ig
Interfer-bind
V-set
PTP-SAK
Tc-R-P
DSPc
Y_phosphatase3
PTPlike_phytase
PTP-NADK
Glyco_hydro_46
Motif
Other DBs
NCBI-GeneID:
124381468
NCBI-ProteinID:
XP_046699067
LinkDB
All DBs
Position
28:8339640..8774149
Genome browser
AA seq
1933 aa
AA seq
DB search
MPTLLLLLLASLLLLTHAETPPKFLRIPSDQTGVQGGVASFVCQATGDPRPKIVWNKKGK
RVSNQRFEVIEFDDGSGSVLRIQPLRTPRDEAIYECVASNSVGEISATTRLTVLREDQLP
SGFPTIDMGPQLKVVERTRTATMLCAASGNPDPDISWFKDFLPVNTSNNNGRIKQLRSES
FGGTPIRGALQIEQSEESDQGKYECVATNNDGTRYSAPANLYVRELREVRRVPPRFSIPP
TDNEIMPGGSVNITCVAVGSPMPYVKWMLGSEDLTPEDDMPIGRNVLELTDVRQSANYTC
VAMSTLGVIEAVAQITVKALPKPPGVPVVTERTATSITLTWDSGNPEPVSYYIIQHKSKY
SEDSYKEIDGVATTRYSVGGLSPYSDYEFRVVAVNNIGRGPSSEAIEAKTAEQAPSTAPR
QVRGRMLSATTAIIHWEEPEEANGQIMGYRVYYTMDPSQHVNQWEKQIVRNANFLTIQGL
TPNKTYYIKVLAYTSVGDGPLSSDLQIIAKTGVPSQPTDFKAEAKSETSILLSWVAPPQS
GQDSQITGYELLYKRKDEKEEKRVSFEPTTTYLLKDLRPFTTYTFQLAARSRHGTGAYTN
EISAETPQTQPSAPPQDVKCFSSSSTSILVSWKPPPMELQNGIITKYTIQYAATEGEDTS
LQEIMEILPEKTRYILENLEKWTEYRVTVTAHTDVGAGPESLPQLIRTEEDVPSGPPRKV
EVEAVNSSSVKVLWRSPVLNRHHGQIRGYQVHYVRMLNGEPVGHSAIKDILIDDAQWEYD
DSTEYEMVLTDLQAETTYSVTVAAYTTKGDGARSKPKVVTTMGAVPEKPRLMVSPTNMGT
ALLQWHPPPNTHGPLQGYRLRFGRKDIEPLTVIEFPERENHYTTKEIHKGASYIFRLSAR
NKVGFGEETIKEITTTEDNPSGFPQGIVAESATTTTIQVSWQPVLLAERNGVIIKYALQY
KDINSPRSPSELFITAPESTVILDGLRADTTYDIKMCAFTSKGPGPYSPSIQFRTQPLDQ
AVFAKNFHVKAAMKTSVLLTWEIPDNYNPAQPFTILYDNGQSVEVDGKLTQKLITNLQPE
TQYSFLLTNRGNSAGGLQHRVSTMTAPDILRTKPYLIGKTNSDGMITVELPSVHTTEKVK
GYYIVVVPLKKQRPGKFLKPSDNPDEMNLEELLREINRTSGGVRFRRQAEPKPYIAAFFK
ELPTEFTLGDNKMYGDFENKQLLNGHEYVFFVLAVLEISENTMYATSPYSDPVVSADIDP
QPIIDEEEGLIWVVGPVLAVVFIICIVIAILLYKSKPDRKRAESDARKGSLPNSKEMPSH
HPTDPVELRRLNFQTPGSGASGYPSNLHLSSMASHPPIPIMDLSDHLERLKANDNLKFSQ
EYESIDPGQQFTWEHSNLEVNKAKNRYANVIAYDHSRVLLSSIDAIPGSDYINANYIDGY
RKQNAYIATQGSLPETFGDFWRMIWEQRSANIVMMTKLEERSRVKCDQYWPNRGSETYGL
IQVTLLDTVELATYCVRTFALYKSGCSEKREVRQFQFTAWPDHGVPEHPTPFLAFLRRVK
ACNPPDAGPMVVHCSAGVGRTGCFIVIDAMLERIKHEKTVDIYGHVTLMRAQRNYMVQTE
DQYVFIHDALLEAVTCGNTEVPARNLYAYIQKLTHIETGENVTGMELEFKRLANTKAHTS
RFISANLPCNKFKNRLVNIMPYESTRVCLQPIRGVEGSDYINASFIDGYRQQKAYIATQG
PLAETTEDFWRMLWEHNSTIVVMLTKLREMGREKCHQYWPAERSARYQYFVVDPMAEYNM
PQYILREFKVTDARDGQSRTVRQFQFTDWPEQGVPKSGEGFIDFIGQVHKTKEQFGQDGP
ITVHCSAGVGRTGVFITLSIVLERMRYEGVVDIFQTVKMLRTQRPAMVQTEDQYQFCYRA
GLEYLGSFDHYAT
NT seq
5802 nt
NT seq
+upstream
nt +downstream
nt
atgccaaccctgctgctgctgctgcttgcctctttactgcttctcacacacgccgagaca
ccaccaaagtttttaaggatccccagcgaccaaacgggagtgcaaggaggcgtcgcatcc
ttcgtttgccaggccacgggtgacccacggcccaaaattgtttggaacaagaaggggaag
agagtgagcaaccagagatttgaggttatagagtttgacgatggctccggttctgtcctg
agaatccagccattgcgcactccacgggatgaagccatttatgaatgtgtggcttccaac
agtgttggagagattagcgccaccacccgcctcactgtcttacgtgaggaccagcttcct
tctggattccccactatagacatgggtcctcagctgaaggtagtggagcgaacacgcact
gccaccatgctgtgtgctgcaagcgggaaccctgaccccgacatctcctggtttaaagat
ttcctccctgttaacaccagcaacaacaatggcagaatcaaacagctccgatcagagtct
tttggtggtactccaatacgaggagcactgcagatcgaacagagcgaggagtcagaccaa
ggaaagtacgagtgtgttgcaactaataacgacggcacccgctactcggctcctgccaac
ttatatgtccgagagctgcgagaagttcgccgggttccgccacgtttctcaatccctccc
acggataacgagatcatgccagggggcagtgtgaacatcacctgtgtggcagtgggctcg
cccatgccctatgtcaaatggatgttgggctcagaggacctgaccccggaggacgacatg
cccatagggcgaaacgtcctggagctcacggacgttcggcagtcagccaattacacctgc
gtagccatgtctacactgggtgtcattgaagcagtggcacagattacagttaaagcttta
cccaaaccacctggtgttcccgtggtaacggaacgcacagcaaccagcatcacgctcaca
tgggactctgggaacccggagccagtttcatattacatcattcaacacaagtcgaagtat
tcagaagactcgtataaagagatcgatggtgtagccaccactcgctacagtgtgggtggc
ctgagcccatactccgattatgaattccgtgtggttgcggtaaacaacatcggccgtgga
ccctctagcgaagcaatagaggccaaaactgctgagcaggcacccagcacagctcctcgc
caagtcagaggtcgtatgctaagcgctacaacagctattattcactgggaagaacctgag
gaggctaacggtcagatcatgggctacagggtgtactacactatggatcctagtcaacat
gtcaatcagtgggagaaacagattgtccggaatgctaactttctcaccattcagggcttg
acacctaataaaacatattatatcaaagttttggcatacacctctgtaggagatggacct
ctctcctctgacctgcagatcatagccaagactggagttccatctcagccgacagacttc
aaagccgaagccaaatccgagacgagtatccttctgtcgtgggtcgctcctccacagagt
ggacaggacagccaaatcactggatacgaactgctttacaagagaaaagatgagaaagaa
gagaaacgtgtgagctttgaacccaccaccacctacctcctgaaggatctgagacccttc
accacctacacttttcaacttgcagcccggagcaggcatggcaccggtgcttacaccaac
gagatctcagcagaaacaccacagacacagccctcagccccgccacaggacgtcaaatgt
tttagttccagttccaccagtattctggtaagttggaagccaccacctatggagctccag
aatgggatcattaccaagtacaccattcagtacgcagctacagagggggaagacacctca
ttacaggagataatggaaattctgccagaaaagactcgatacatcctggaaaacttggaa
aaatggacggaataccgtgtgacagttacagctcatacagatgttggagcagggccggaa
agcctaccacaactcatccgtacagaggaggatgttcccagtggcccgcctcgcaaagtc
gaggtggaggctgtcaactcgtcgtctgttaaagtgctgtggcgatcgccggtgctcaac
agacatcacgggcaaattcgtggataccaggtgcattatgtcaggatgcttaatggggaa
ccagtgggccattctgccatcaaggacatcttgattgatgatgcccagtgggagtatgat
gattcaactgaatatgaaatggtcctgacagacttgcaggcagagaccacgtattcagtt
acagtggctgcctacacgaccaaaggtgatggagctcgcagtaagcccaaagtggtcaca
accatgggagcagtcccagagaagcctcgcctgatggtcagtcccactaacatgggcaca
gctttgcttcaatggcaccctcccccaaatacacatggcccactccagggctaccggctc
cgattcggacgcaaagacattgagcccctgacggttattgagttcccagagcgggagaac
cactacactaccaaagaaattcacaagggagcgtcctatattttccgcctctcagctcgc
aacaaggtgggctttggtgaggagactattaaagagatcacaaccactgaggacaacccc
tctggttttccacaaggcatcgtggccgaaagcgccaccacgactaccattcaggtcagc
tggcagcccgtgctactggccgagcgcaatggcgttattatcaaatacgcccttcaatac
aaagacatcaacagtcccaggagtccatctgagcttttcatcactgcccctgagtccacc
gtaatcctggatggtcttagagccgacactacctatgatatcaaaatgtgtgccttcacc
agcaagggccctgggccttatagccctagcatccagttcagaacacaaccgctagatcaa
gcagtgtttgcaaaaaattttcatgtgaaagccgccatgaagacctccgtgctgcttacc
tgggagattccggacaactacaatcccgcccagccgtttacaattctctatgataatggc
cagagtgtagaagtggatgggaaactgacccagaagttgatcacaaatcttcaaccagag
actcaatactctttcctcctgaccaatcgagggaacagtgctggcggtctgcagcatcgc
gtctccaccatgaccgccccggacatcctgcgcaccaaaccctacttaataggcaagacc
aactccgacggcatgatcactgtggaactgccttccgttcacaccactgagaaagtcaag
ggatactacattgtggtggtccctttaaagaaacagcgccctggaaagtttctcaaaccc
tcagacaacccagatgaaatgaacctggaagagcttctgagagagataaatcggacaagt
ggaggtgtgcgtttccgaagacaggccgagcctaaaccctacatcgccgcgttcttcaaa
gagctgcctactgagttcaccctcggagacaacaagatgtatggagacttcgagaacaag
cagctgctcaacggacatgaatacgtcttctttgttctcgccgtcctggagatttccgaa
aataccatgtacgccaccagtccgtactctgacccggtggtttcggccgacattgacccc
cagcctatcattgatgaagaagaaggattaatctgggttgtggggcctgtcctggctgta
gtcttcatcatctgcatagtcatcgctattctgctgtataagagcaaacctgacaggaaa
cgagctgagtcagatgctaggaaaggcagcttacccaacagtaaggaaatgccgtcccat
catcccactgatccagtggagctacggcgtctcaactttcaaactcctggttccggtgcc
tccggttaccccagtaatctccatctgtcaagtatggcgagtcatcctccgattcccatt
atggacctgtctgaccacttggagagactcaaagctaatgacaacctgaagttctcacag
gaatatgagtctatagatccaggccagcagtttacatgggaacactcgaacctggaggta
aacaaagccaagaaccgctatgccaatgtcatcgcctacgaccattccagggtgctgctg
tcctctatagatgccattccagggagtgactacatcaacgccaactacatcgacggttac
agaaagcagaatgcttacatcgccacacagggctctttgcccgagaccttcggcgatttc
tggaggatgatctgggagcagcgcagtgctaacatcgtcatgatgaccaagctggaggaa
cgttcaagggtcaagtgtgaccagtactggcccaacaggggatcagaaacatacggcctg
atacaggtgacgctgctggacacagttgagctggccacctactgtgtcaggacgttcgca
ctttataaaagtggctgtagtgagaagcgggaggtgaggcagttccagtttacggcgtgg
cctgatcacggcgttcccgaacaccccacaccgttcctggccttcctgcgccgggttaaa
gcctgcaaccctccagacgccgggcctatggtggtgcactgcagcgccggcgtgggtcga
accggctgcttcatcgtgatcgacgccatgttggagcggatcaagcacgagaagacggtg
gacatttacggccacgtgacgctgatgcgagcccagaggaactacatggtgcagacggag
gaccaatacgtgttcattcacgacgctctgctggaggccgtgacctgcggcaacacggag
gtccccgctcgcaacctgtacgcctacattcagaaactcacccacatcgagacgggagag
aacgtcacgggcatggagctggagttcaaacgcttggccaacacgaaggctcacacgtca
cgcttcatcagtgccaatctgccctgcaacaagttcaaaaaccggctggtcaacatcatg
ccatacgagtcaacacgagtatgtctgcagcccatcagaggggtggaaggatctgattac
atcaatgccagctttatcgacgggtaccggcagcagaaggcgtacatcgccacgcagggc
cctctggctgaaaccacagaagacttctggaggatgctatgggagcacaactccaccatc
gtggtgatgctcacgaaactccgagagatgggcagggaaaaatgccatcagtattggcca
gcagaacgctctgctcggtatcagtactttgtggtggaccccatggccgagtacaacatg
cctcagtacatcctacgagagtttaaagtcaccgatgccagggacggacagtcccggacg
gtgcggcagttccagttcaccgactggcctgagcagggcgtgcccaaatcaggagagggt
ttcatcgacttcatcggccaagtgcacaaaacaaaggagcagtttggccaggacggacca
atcacagtgcactgcagtgcgggtgtcggaaggacaggagtcttcatcactcttagtatt
gttctggagagaatgaggtatgagggagtagtggacatcttccagacagtcaagatgctg
aggacacagagaccagccatggtacagacagaggatcaataccagttctgctaccgtgcg
ggtctggagtatctgggaagcttcgatcactatgcaacgtaa
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