Silurus meridionalis (southern catfish): 124381545
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Entry
124381545 CDS
T08004
Symbol
lrba
Name
(RefSeq) lipopolysaccharide-responsive and beige-like anchor protein isoform X1
KO
K24181
lipopolysaccharide-responsive and beige-like anchor protein
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124381545 (lrba)
Membrane trafficking [BR:
smeo04131
]
Endosome - Lysosome transport
Others
Others
124381545 (lrba)
Endosome - Golgi transport
124381545 (lrba)
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
124381545 (lrba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4704
Beach
DUF1088
NBCH_WD40
PH_BEACH
WD40
Laminin_G_3
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR75_1st
WDR55
WD40_MABP1-WDR62_2nd
WD40_WDHD1_1st
Beta-prop_IFT140_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
SUKH_6
EIF3I
Beta-prop_EML
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
124381545
NCBI-ProteinID:
XP_046699239
LinkDB
All DBs
Position
28:10292573..10501277
Genome browser
AA seq
2623 aa
AA seq
DB search
MAASCSKAALGVEVHGSLLRSGLFLHFSRKSAAAIALPPIAKWPHQNGFTFHTWLRLDPI
NNMNVDKDKPYLYCFRTSKGMGYSVHFVGGCLIVTALKAKGKGFQHCVKFDFKPQKWYMV
TIVHVYHRWKNSEISCYVNGELASYGEITWFVNTSDTFDKCFLGSAETADANRVFCGQMG
AVYLFNDALNAAQILAIYQLGPSYQGVFKYKAESDLLFADHHKSLLYDGKLSASIAFTYN
PRATDAQLCLESSPRDNMSIFIHSPHALMLQDVKAVVTHSVQSAIHSIGGVQVLFPLFTQ
LDFVQPNSEEPDISVSCTLLSFLLELLKLSVAMQEQILACKGFLVIGYSLEKSSKVHVTR
PVLDIILSFARYLSNLPNGILLLKQLCDHILFNPAIWIHTPAKVQQILYTYLATEFISTV
TIYNAVRRVGTVLQVMHTLKYYYWVVNPQDRSGVTPKGLDGPRPSQKEIHALRAFLLLFV
KQLIMKDMGVKEDELQSILNYLLTMHEDDNLMDVLQLLVALMSEHPGSMVQAFDQRNGIR
VIYKLLASKSEGIRVQALKVLGYFLRHLQPKRKSEVMLSHGLFSLLTERLLLHSSQFSMT
TYNVLFEILTEQICTQVIHKQHPDPDSTIKIQNPQILKVIAALLKNSVSPESMEIRRVFL
SDMIKLFNSSRENRRSLLQCSVWQEWMLSLCFINPSSNEELKITEMVYTVFRILLYHAIK
HEWGGWRVWVDTLSITHSKVTFEQHKESLSRVFHEYQRMCSDGDNEIRTVSGSSRNSELP
AEPADPTAEPPSTIIELKVKEQVCGEHDERIERAQVTVSNILARAEEEDTKEEEAKDESS
IQKTQDKGEPETKKHEENNLEVSEGKDTEEEALKEKTEADKEIEDKSEAGDFKSTKASSQ
MLEADHEASAQKISYEDDDTLGITDEMKKKDDVVQGDSEEKEQKEGKISEITEEVLKIGE
SPSGEEILDIEVQATVEASPSTEMVQSAEQVPSVQGSPSEETSSSVEKSPSTQEDTTIKE
TPSVEMSPKMEEGPSTQGVHSADISPSTQEGISVPESPSAEAGFKPKDVKIARLDVSSVA
IDTERLELKNTSATDAGQGQAATGSSAQNRDSSPSSPRSSMFRIPEFKWSHMHQRLLTDL
LFSIETDVQMWRSHSTKTVMDFVNSSENVVFVHNTVHLISQVVDNLIMASGGILPLLSAA
TSSTHQLEAIDASQGLEVETSLTFLQRLISLVDVLVLSSSLNFTEIEAEKNMTSGGVLRQ
CLRLVCTMAVRSCLECQHHSLSLSGMEKTQQSLLGNAMFIPAQSPVDMLTGGMSPVRDLE
RLLQDMDINRLRAIVFRDIEDSKQAQFLALAVVYFISVLMVSKYRDILEPHNDKRVNTHT
AQSAESISSDQENSSPLQRCDSAPANEHSPGAPSNAESRSAPDAISEALSTLSSEVKGHE
DTEKDKKGKSVKVKDILRSLVSSAPADDVIVDASLLPPAFLGKPELHSQFSSFDRSVVVA
SKKMGGASGTGHTSSSSSTLPQSTTPSTGGTPVVSVSVVSTGDSDPSGAAESGGAAAASN
LPSVPLSPTTTLSISERLEHALEKAAPLLREIFIDFAPFLSRTLLGSHGQELLIEGTSLV
CMKSSSSVVELVMLLCSQEWQNSIQKNAGLAFIELVNEGRLLSHTMKDHLVRVANEAEFI
LSRQRAEDIHKHADFESQCAQYAADKREEEKMCDHLIRAAKYRDHVTSTHLIQKIINILT
DKHGAWGSSAHNKQCYWRLDFWEDDLRRRRRLIRNPFGSSHTEATLKSAAERAPEDDVLK
GQQLGKDTARNQSAESESVTEGDDDTISSLEEKELDSLTGTVSLSTVAELVSPALVMKGT
LSITANELYFEVDEDEVNVKIIDPKLLAYADGLHGKWMFSEIRAIFSRRFLLQNTALEIF
MANRTSVMFNFADAATIKKVVYALPRVGVGTNFGLPQTRRISLATPKQLFKASNMTQRWQ
KRELSNFEYLMFLNTIAGRTYNDLNQYPVFPWIISNYDSEELDLTLPSNYRDLSKPIGAL
NPKRAAFFSERYESWEDDQVPKFHYGTHYSTASFTMMWLLRIEPFTTFFLNFQGGKFDHA
DRTFSSVARAWRNCQRDTSDVKELIPEFFYLPEMFINANDYNLGVMDDGTVVCDVELPPW
AKSPEDFVRINRMALESEFVSCQLHQWVDLIFGYKQRGPEAARSLNVFYYLTYEGAVNLS
SITDPMLREAVESQIRSFGQTPSQLLIEPHPPRSSAMQVTPLMFTEQMQQDVIMVLKFPS
NSPVVSVSAHTQAALSNPAIVTITANRIFSINKWHGLTSHQSSSNTEQQYQLPVEIDPVI
VGNLMHRRQVCDLLDQSVEVNSHCFLVTADNRFLFIAGFWDKSFRIYNTDTGKLVQIVFG
HRDVVTCVFRSESYIGGDCYVLSGSRDATLLLWYWSGKHCCIGDTHSEFVTPRAILTGHA
CEVTCASVCAELGVVISGSKDGPCLLHSVSGELLRVFESSEKPMLMQASSEGHCVIYHSS
GHVCVYSINGKLLRDTHIEDNIKAMVLSKDGQYLLCGGERGILTVWQLHDLKQLFTYPGC
DAAIRSMAISSDQRCIITGMASGSIVLFYNDFNRWHHEYRTRY
NT seq
7872 nt
NT seq
+upstream
nt +downstream
nt
atggccgcctcatgcagtaaagctgctctcggtgttgaagtccatggctcattgctccgg
tccggactctttcttcacttttccaggaaaagtgcagcagccatagcacttccaccgatt
gctaaatggccgcatcagaacggtttcacctttcacacctggctgcgtctggatcccatc
aataacatgaacgtagacaaagacaagccatacctgtactgttttcggacaagtaaaggt
atgggatattcagtccattttgttggtggatgtctgatcgttacggcattaaaggccaaa
gggaaagggttccagcactgcgtcaagtttgacttcaaaccgcaaaagtggtacatggtg
accatcgtgcacgtgtaccatcgctggaagaacagtgaaatcagctgctatgtgaatgga
gagctggcgtcctacggagagattacgtggttcgtcaacaccagtgatacatttgataaa
tgttttctgggctcggctgagacggcggacgctaaccgtgtgttttgcggtcagatgggg
gcagtgtatctgttcaacgacgccctcaacgctgcacagattctggccatctatcagtta
ggcccctcctaccagggcgtgtttaaatataaagcagaaagcgaccttctgtttgcggat
catcataaatctctgctgtatgacggcaaactgagcgccagcatcgccttcacctacaac
ccccgagctacagatgcccagctgtgcctcgagtcgtcacccagagacaacatgtccatt
ttcatacactctcctcatgccctgatgttgcaggatgtgaaggccgtagtcactcactcg
gttcagagtgccatccactctatcggaggtgtgcaggtcctcttccctctttttactcag
ctggactttgtgcagccgaacagcgaagagcctgacatctctgtctcctgtacactgttg
tccttcttgttggagttgctgaagttgtctgtagcgatgcaggagcagatactcgcctgt
aagggcttcctggtcatcggatactctctggagaagtcttctaaagtccatgtaacgagg
cccgtgctggacatcattttgtcatttgctcggtatttgagtaacctgcccaacggcatc
ttactgctcaaacagctgtgtgatcacatcctgttcaacccggccatctggatacacaca
ccggccaaggtgcaacaaatcttgtacacgtatttagccaccgagttcatcagcacagtg
acgatctacaatgctgtacgccgtgtgggaacagtgctacaggtcatgcacacgcttaaa
tattattactgggtggttaatccacaggaccgcagtggagtgaccccgaaaggccttgat
ggtccaaggcctagtcagaaggagatccatgctctcagagccttcttgctgctctttgtc
aaacagctcattatgaaggacatgggagtgaaggaagatgagctgcagagcatcctgaac
tacctgctcaccatgcatgaggatgataacctgatggacgtcctgcagctgctcgtggcg
ttgatgtccgaacacccgggttccatggtgcaagcgttcgatcagcgtaatggcatccgg
gtcatttacaaactgctggcatctaaaagtgaagggattcgagtgcaagctctgaaagtg
ttgggttacttcctccgacatttacagcccaagaggaagtccgaggtcatgctgagtcac
ggtttattttcactcttaactgaacgcttgctgctgcactccagccagttctccatgacc
acctacaacgtcctgtttgagattctgacagagcagatctgcacacaggtgatccacaag
cagcatcctgatcctgactccaccatcaaaatccaaaacccacaaatcctgaaggtgatt
gcggctctgctaaagaacagcgtgtctccggaaagcatggagatccgccgagtgtttctc
tccgacatgatcaaactgtttaacagcagccgagaaaacaggaggagtcttctgcagtgc
tctgtgtggcaggagtggatgctctctctgtgctttataaatccaagcagcaatgaggag
ctgaagatcacagagatggtgtacaccgtcttccgcatcctactctatcatgccatcaag
cacgagtggggaggctggcgcgtgtgggtcgacacactctccatcacacactccaaggtc
accttcgagcagcacaaagagagcttatcccgtgttttccacgaataccagcggatgtgt
tccgatggcgacaatgagatcagaaccgtttccgggtcgagcaggaacagtgaacttcct
gcagagcctgcagaccctacagctgaacctccatccaccattatcgagctaaaggtgaag
gagcaggtctgtggagaacatgatgaacgcatagaaagggctcaagtcaccgtttcaaac
attttagccagagctgaggaagaggacacaaaggaggaggaagcaaaagatgaatcctca
attcagaagacacaggataaaggtgaacctgaaacaaagaagcatgaggagaacaacctg
gaagtttctgaaggaaaggataccgaagaagaagctttaaaggaaaagacagaagctgat
aaagagattgaagacaagagtgaagcaggggattttaaaagcaccaaagcaagcagccaa
atgttagaagctgatcatgaagccagtgcacagaagatctcgtatgaagatgatgataca
ctgggaatcacggatgaaatgaaaaagaaagatgatgtagtccaaggagacagtgaagag
aaagaacagaaagaggggaagatatctgagataactgaagaggtcctcaagataggggag
agccccagtggggaagagattctagacattgaggtgcaggccactgtggaggcgagtccc
agcacagagatggtccaaagtgcagagcaagttcctagtgtccagggaagtcctagtgag
gagacgagctccagtgtggagaagagccccagcacgcaggaggatactactattaaggag
acccctagtgtggagatgagccctaagatggaggagggcccgagtactcaaggagtccac
agtgcagatataagccccagcacacaggagggtattagtgtcccagagagccccagtgca
gaagcaggcttcaagcctaaagatgttaaaatcgccagactggacgtctccagtgtagcg
atagacacagaaagactggagctgaaaaacacctcagctactgatgcaggccaaggccaa
gcggccactgggtcttctgcgcagaatcgagacagttccccgtcctcccctcgctccagc
atgttccgtatcccagaatttaagtggtctcacatgcaccagcgcctgctgactgacctg
ctcttctccatcgagacggatgtgcagatgtggaggagccactctactaagactgtgatg
gactttgtgaacagcagtgagaacgtagtgtttgtgcacaacacggtgcatctgatctct
caggtggtggataatctaatcatggcttctggaggaatcctgcctctgctttctgcggcc
acttcatccacgcatcagttggaggcgattgacgcatctcagggtcttgaagtggaaaca
tctctgaccttcctgcagcgtctcatctctctagtggacgtcctcgtcttgtctagctca
ctgaacttcacagagattgaggcggagaaaaacatgacatcgggaggagtgctgagacag
tgcttacgcctcgtgtgcactatggctgtaaggagttgtttagagtgtcagcatcactct
ctgtcactctctggaatggagaaaacacagcaaagccttctgggaaatgccatgtttatt
ccagcacagagtcctgttgacatgctaacaggagggatgtctcctgtccgagatttggag
cggctgctgcaggacatggacatcaaccgtctccgagccatcgtgttcagagacattgag
gacagtaagcaggctcagtttttggctctggctgttgtttatttcatctccgttctcatg
gtgtccaaataccgagacattctggagccccacaacgacaagagagtcaacacacacact
gctcaaagcgcagagagcatcagttccgaccaggaaaattcttccccactccaacgctgt
gactccgcaccagcaaatgagcactcacctggtgctccaagcaatgctgaatcccgttcg
gctccggacgccatctctgaggccctctccacactgtcatcagaggtcaaaggtcacgag
gacacagaaaaggataaaaagggaaagagcgtaaaggtgaaggacattttgcggagcctc
gtaagctccgcccctgcagatgatgtcatcgtggacgcaagtcttttaccaccagcgttt
ttggggaagccagaactccactctcagtttagttcatttgacaggagcgttgttgtggca
tcaaagaaaatgggcggcgcttctggaacaggccacacctcttcctcctcctccaccctt
ccacaatccactactccctccacaggtggaactcctgtcgtcagcgtttctgtggtttcc
acaggtgactccgacccgagcggtgctgcggagtcaggaggagcagcagccgcttcaaac
ctgccatctgttcccctctcacccaccaccaccctgagtatctcggagcgactggaacac
gctctggagaaagctgctccgttactacgggagattttcatagacttcgcgccgttcttg
tcccgaactttactaggtagccacggacaggagctgctcatcgagggaactagtttggtg
tgtatgaagtctagtagctctgtagtggagcttgtcatgctgctttgttctcaggaatgg
cagaactccatacagaagaatgccggtttagccttcatcgagctcgtcaatgaaggaagg
ttgctgagtcacacgatgaaggaccaccttgtacgtgttgcaaatgaagccgagttcatt
ttaagtcgacagagagcagaggacatacacaaacatgccgattttgagtcccaatgtgct
cagtacgcagcagataaacgcgaagaagagaagatgtgcgatcacctgatccgagccgca
aaataccgtgatcatgtgacctcgacacacctcatccagaagatcatcaacatcctgact
gacaaacatggagcctggggaagctccgcccacaataagcagtgttattggcgtttggat
ttctgggaggatgacctgaggagacgccgtcgcttgatcaggaatccattcgggtcgtct
cacactgaggccacactcaaatctgcagctgagcgtgctccagaggatgacgtgctgaag
gggcagcagctcgggaaagacacggcgaggaatcagagtgccgagagcgagagtgtgacg
gagggagacgacgacaccatctcatctctggaggagaaagagctggacagtctcacaggc
acagtgtctctcagcacagtagctgagctggtctctcctgcactcgtcatgaaaggaact
ctgtccatcaccgccaacgagctttactttgaggtggatgaagacgaagttaacgtcaag
attatcgaccccaagttgttggcttatgctgatggactgcacgggaagtggatgttctcg
gaaatccgagccatcttctcacgacggttcctcctacagaacacagcgctggagatcttc
atggccaatcgaacctctgtgatgttcaactttgctgatgccgcgacaataaagaaagtg
gtttatgctctgccacgagtcggagtcggcacgaacttcggccttcctcagaccaggcgg
atttctctggcgactcctaaacagttattcaaagcctctaacatgactcaacgctggcag
aaacgcgaactctctaacttcgagtacctcatgttcctcaacaccattgcaggacgcacg
tataatgacctcaatcagtatcctgtatttccctggatcatcagcaactacgacagcgaa
gagctcgacctcacactgcccagcaactacagagacctgagcaagccaatcggagccctg
aacccaaagagagctgctttcttttccgaacgctatgaatcatgggaagacgaccaggtc
cccaaattccactacggcacacactattccacagccagctttaccatgatgtggctgctg
aggatcgagccgttcactacattcttcctcaacttccaaggagggaagtttgatcacgca
gaccgaactttctcctctgtcgccagggcctggaggaactgtcagagagacacatcagac
gtgaaggagctgatccccgagttcttctatctgccagagatgttcattaacgctaacgac
tataatctgggagtgatggatgacgggacggtggtgtgtgatgtcgagctgccgccgtgg
gcaaagagtccggaggactttgttcgcatcaaccgcatggcactggagagtgagttcgtg
tcatgtcagctccatcagtgggtggatttgattttcggctataaacagcgtgggcctgaa
gcagcgcgctccctcaacgtcttctactacctcacctacgagggggcggtgaacctcagc
tccatcactgacccgatgctgagagaggctgtggagtctcaaatccggagttttggacag
actccatctcagctgctgatcgagcctcatccaccacgaagctctgccatgcaggtgacc
ccactgatgtttacggagcagatgcagcaggatgtgatcatggtgctgaagtttccctcc
aactctcccgtggtgtctgtgtcggctcacacccaggcagctctatccaaccctgccatc
gtcaccatcacagccaatcgcatcttctcgataaacaagtggcatggcctcaccagtcac
cagagctcttcgaacacggagcaacagtaccagctgccggttgagatcgaccctgtgata
gtggggaacctgatgcaccgaagacaggtgtgtgatttattggatcagagtgtggaggtg
aactctcactgtttcctcgttacggcagataatcgcttcctcttcattgccggattctgg
gacaagagcttccgcatatacaacactgatacggggaaactggtacagatcgtgttcggt
caccgcgacgtggtgacgtgtgtgtttcggtccgagtcgtacatcggaggtgactgctac
gtgctgagtggctcgagagacgccacgctgctgctgtggtactggagcgggaaacactgc
tgcattggtgacacacatagtgaatttgtgactccccgagcaattcttacgggccacgcc
tgtgaagtgacctgtgcaagtgtgtgtgcagagctcggagtggtcatcagtggttctaaa
gacggcccgtgtctgttacactctgtgagtggagagctgctgcgcgtgtttgagagcagc
gagaagccgatgctgatgcaggcgagttcagagggacactgcgtcatctaccacagctcc
ggacacgtgtgtgtgtacagcatcaacggcaaactgctgcgtgacacacacattgaggac
aacatcaaggcgatggtattgagtaaagatggtcagtacctgctttgtggaggagagcgc
ggtattctcactgtgtggcagctccatgatcttaaacagctcttcacttatccaggctgc
gatgctgccattcgctcaatggctataagcagtgaccaaagatgtatcattaccggcatg
gcgtctggcagcattgttctcttctacaacgacttcaacagatggcatcatgagtaccga
acccggtactga
DBGET
integrated database retrieval system
