Silurus meridionalis (southern catfish): 124381552 Help Entry 124381552         CDS       T08004                                  Symbol aptx Name (RefSeq) LOW QUALITY PROTEIN: aprataxin   KO K10863   aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72] Organism smeo  Silurus meridionalis (southern catfish) Pathway smeo03410   Base excision repair Brite KEGG Orthology (KO) [BR:smeo00001]  09120 Genetic Information Processing   09124 Replication and repair    03410 Base excision repair     124381552 (aptx)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:smeo03400]     124381552 (aptx) Enzymes [BR:smeo01000]  3. Hydrolases   3.6  Acting on acid anhydrides    3.6.1  In phosphorus-containing anhydrides     3.6.1.70  guanosine-5'-diphospho-5'-[DNA] diphosphatase      124381552 (aptx)     3.6.1.71  adenosine-5'-diphospho-5'-[DNA] diphosphatase      124381552 (aptx)     3.6.1.72  DNA-3'-diphospho-5'-guanosine diphosphatase      124381552 (aptx) DNA repair and recombination proteins [BR:smeo03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Other BER factors      124381552 (aptx)   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     Other NHEJ factors      124381552 (aptx) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DcpS_C FHA_2 zf-C2HE HIT Motif Other DBs NCBI-GeneID:  124381552 NCBI-ProteinID:  XP_046699250 LinkDB All DBs Position 28:14534688..14537222 Genome browser AA seq 327 aa AA seqDB search MLTCWLVSEEEIHHPIQLLHHHTHTLGRSPETKIKDQKCSRQQVELRADCKRGFVSVKQL GSNPSSLDDVVVGKGNQVTFKPGQKLYLLNRLYPYTLQFRDESTSGSSLLGRKADRXRDH TRETQRKRKMRRRLRVCDKSSRVCSPQEGTGHWSQGLRVSMQDPSMQVYKDEKVVVIKDK YPKARYHWLVLPWDSISSLKALRSEHVELLRHMEQVGDRMVQQQSPNRLHFRLGYHAIPS MSHVHLHVISQDFDSPCLKNKKHWNSFTTDYFINSQDVIAMLERDGRVSVKDGAGELLKL PLRCHVCREEQTTMPKLKEHIRTHLLS NT seq 984 nt NT seq  +upstreamnt  +downstreamnt atgttgacttgttggttggtgagtgaggaggagatccatcatcccatccagctccttcat catcacacacacactctggggcgaagtccagaaactaagatcaaagaccagaaatgctcc agacagcaagtggaactgagagcagattgtaagcgagggttcgtcagcgtgaagcagtta ggcagcaatccatcaagcctggatgatgtagtcgtgggcaaaggcaaccaggtgaccttc aaacccggccagaagctctacctgctcaacaggctttacccgtacacgctgcagttcaga gacgaatcaacatctggctcttcgctcctggggagaaaagcagaccgatgaagagaccac accagagagacacagaggaagagaaaaatgaggagaagattgcgagtgtgtgataaatca tcaagggtttgttctccacaggaaggcacaggtcactggagtcaaggtctcagagtctca atgcaggaccccagcatgcaggtgtacaaagacgagaaggtggtggtgattaaggacaag tacccgaaggcgcggtaccactggctggtcctgccgtgggactccatctccagcctgaag gctctgaggtccgagcacgtggagctgctgagacacatggagcaggtcggagatcgcatg gtgcagcagcagagtccaaacaggctccatttccgtctgggttaccacgccatcccgagc atgagccacgttcaccttcacgtcatcagccaggactttgattctccatgtctgaagaat aagaaacactggaactccttcaccacggattacttcattaactctcaggatgtcatcgcg atgctggagagagatggccgcgtgagcgtgaaggacggagccggcgagctcctgaagctc ccgctgagatgccacgtctgccgcgaagagcaaaccaccatgcccaagctgaaggaacac atccggactcacctgctgtcctga

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