Silurus meridionalis (southern catfish): 124381563
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Entry
124381563 CDS
T08004
Name
(RefSeq) exportin-5 isoform X1
KO
K14289
exportin-5
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124381563
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smeo03016
]
124381563
03036 Chromosome and associated proteins [BR:
smeo03036
]
124381563
Transfer RNA biogenesis [BR:
smeo03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
124381563
Chromosome and associated proteins [BR:
smeo03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
124381563
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exportin-5
Xpo1
IBN_N
Motif
Other DBs
NCBI-GeneID:
124381563
NCBI-ProteinID:
XP_046699270
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All DBs
Position
28:complement(4957984..4979803)
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AA seq
1207 aa
AA seq
DB search
MAESVGAMCEQLVKAVTVMMDAESNQRYRLEALKFCEEFKEKCPYCIPCGLQLADKSQPA
VVRHFGLQILEHVIKFQWNNMEQHEKVHLKDCAMEMLTNGTFPILEEESHIKDALSRIVV
EMIKREWPQQWPDMLKEMETLTTFGDTQTELVMLILLRLAEDVITFQTLPQQRRRDIQHT
LTQNMDGIFSFLLNILQQHVDEYRKLKINPGQELKAKAHCRVSVTTLNTLAGYIDWVALV
HITNNSCHLLEILCLLLSEPELRLEAAECLLIAVSRKGKLEDRKPFMVLFKDVAMHYILS
AAQSAEVGLSETRYTFLKRLCQVLCALGSQLCALVGSPAEVEVPANLSKYLEAFLAFTTH
PSQFLRSCTQTTWGNMFRHEVLSKEPVITQMTVKYLNATMTNLVKTGFPSKNDSPTCDYA
RVDFDSDEDFNAFFHSFRAQQGDVIRHSCKIAPLEAFQIAAEWLKYQINSPSNSGNALSK
PGEGTCSTFSPTAVQWEAMTFFTESVMGQLFKVLEKEKLPVDQGMELLQAVVSYETRDPV
VLSCVLTNLSTFFPFVLHRPELLPQVFFKLFPAITFEVVEESKAPRTRAVKNVRRHACSS
IIKMCRDYPEFILPSFDLLYTRVKELFINELLLTQMEKCALMEALVLISNQFKDYSKQKA
FLVELMGAVTARWLSEEMRSVLSDPASFITFIGADQVNPQPGTEDQMGINRSRISFCVYT
ILGVVKRAHCPTDVEEAKAGGFVVGYTPAGAPIYRNPASEPLLALLPNLLTLIRTHNSLF
LPENLARLSETFSRVYDVMDVEKNLILGITQPLLDMYDSPVYRSSLERLQGFFCTLYDNC
YHVLGHAGPALLQDFYTIEGLAEQLAGSAFLHLEHVPDHRLRPMLRVFMKPLVTSCPPEY
YETLLCPLLRLLLCHLLQRLNLRWQIINQRTSVCGPDDDEAYEENQVSQEMLEDRLVRLV
TREVMDLLSVSCISRKLPESGANREDADGDEEMMATDSTPLNTSHTSDELTELGKCLLKH
EDVYMNLLAISFNSLSWRDTSNCQRAATLICWTLLRQVVGSNLLPDAVTWLYTRVLSGLQ
MHGQHEGCNAALTQLALLIYDALRPQYAELRSIMNQIPNIQPDLLEQFDQKTINPALQKI
GEKKRKDQFKKLIAGAVGKPLGQQFKKEVHIRNLPSLFKKVKPNKDVVANSENTGLVALF
SPEHDDH
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atggccgagtcagtgggcgcgatgtgcgagcagctcgtcaaggctgtgaccgtcatgatg
gacgcggaatccaatcagcggtaccgcctggaggctctgaagttttgcgaggaattcaag
gaaaaatgtccttattgcataccatgtggccttcagctagcagacaaatcgcagccggcg
gtggtgagacattttggtctacaaattctggagcacgttatcaagtttcagtggaacaac
atggaacagcacgagaaagttcatttgaaagactgcgccatggagatgctgactaacgga
acgtttcccatcttggaggaggagagtcacattaaagacgctctgtcgaggattgttgtg
gagatgatcaagagagagtggcctcagcagtggccagatatgctgaaagagatggaaacg
ctcactaccttcggggacactcagactgagctggtgatgctgatcctgctgcggctggcc
gaggacgtgatcacgttccagactcttcctcagcagaggcgcagagacatccagcacacg
ctgacgcagaacatggacggcatcttcagtttccttctgaacatcctgcagcagcacgtc
gacgagtacaggaaactgaaaataaatccaggacaggagttaaaggccaaagctcactgt
cgagtcagcgtgaccaccctgaacactctggccggctacatcgactgggtcgccctggtt
cacatcacaaacaacagctgtcatttactggagatcctctgccttcttctgagtgaacca
gagcttcggctggaggctgctgagtgtttgctcattgcagtcagcaggaaagggaaactg
gaagacaggaagcccttcatggtgctctttaaagacgtggccatgcactacattctttcg
gccgcccagtcagcggaagtggggctcagcgagacgagatacactttcctgaagaggtta
tgtcaagtgctctgtgctcttggcagtcagctctgtgccttggtgggctcgcctgcagaa
gtagaggttccagccaacctgagtaaatacttggaagcattcctggccttcactactcac
cccagtcagttcctcagatcttgcactcagaccacctggggaaacatgttcagacatgag
gttttatcgaaggagcccgttattacacagatgacggttaaatatttaaatgcgaccatg
accaacctcgtgaagacgggattcccgtcgaagaacgacagcccgacttgcgattacgcc
cgcgtggacttcgacagcgacgaggacttcaacgctttctttcactctttccgggcccag
cagggtgacgttattcgtcattcctgtaagatcgcgccccttgaagccttccagattgct
gccgaatggttaaagtatcagatcaactcgccctctaacagcggaaacgctctgtctaaa
ccaggtgaagggacgtgctcgacgttttcgcccaccgctgtgcagtgggaggccatgacc
tttttcacagagagtgtgatgggccaacttttcaaagtcctggagaaagagaagttgcct
gtcgatcaaggcatggagctgctacaagccgtagtgagctacgagacgcgagatcctgtc
gttttgtcctgcgtactcaccaacctgtccaccttcttcccctttgtcttgcatcgccca
gaacttctaccacaagtgttctttaagctgtttcctgccatcacattcgaagtggtagaa
gaaagcaaggctcctcgaacccgagcggtgaagaacgtcagaagacacgcctgctcctcc
atcatcaagatgtgtcgagattatccagagtttatcctgccatcctttgacctgctctac
actcgcgtgaaggagctgttcatcaacgagctgctgctaacccagatggagaagtgtgca
ctcatggaggcgctggtgctgatcagcaaccagtttaaggactacagcaagcagaaggcc
ttcttagtggagctcatgggcgccgtgacggcacgctggctctcggaggagatgcgcagc
gtattatcagatccagccagcttcattacgtttattggcgccgatcaggtcaaccctcaa
cccggcactgaggatcagatgggaatcaacaggtcaaggattagtttttgtgtgtatacc
atcctgggcgtggtgaagcgagcacactgtcctacggatgtcgaggaagccaaagccggg
ggttttgtagtgggctacactccagctggagcaccgatctacagaaaccctgcctcagag
cccctcctggctctgcttccaaatctgctcaccctcatcaggacccacaacagcttattt
ctaccagagaatctagctcgactcagcgagaccttcagccgagtctatgatgtcatggac
gtggagaagaatctcattttaggaatcactcagccgctgctggacatgtacgactctcca
gtgtatagaagctcactagagcggttacaaggcttcttctgcaccctctacgacaactgt
taccatgtgctcggtcacgccggcccggccctgctgcaggacttttataccatagagggt
ctggccgaacagttggccggctcggccttcctccacctggagcacgttcctgaccataga
cttcgccctatgcttcgggtgttcatgaaaccgctggtcacgtcctgtcctcccgaatat
tacgagactcttctctgtccactgctccgccttctgttgtgtcatctgctgcagagactg
aacctccgctggcagatcatcaaccagaggacgagcgtatgtgggccggatgacgacgag
gcttatgaggagaatcaggtgtctcaggaaatgctggaagatcggctagtgcgcttggtc
acgcgagaggtcatggatctcctcagtgtttcgtgcatatcgagaaagctgccggaatca
ggagcaaaccgagaagatgctgatggggatgaggaaatgatggcaaccgattccactccg
ctgaacacatcacatacttcagatgagctcacagaactgggcaagtgtctccttaaacat
gaggacgtctacatgaatctgctggcgatctcatttaactctctgtcatggagagacacc
agtaactgtcagcgagccgctacgcttatctgctggacattgctcagacaggttgtaggt
tcaaatttgctcccggatgccgtgacgtggctgtacaccagagtgctgagcggcctgcag
atgcacggccagcacgagggctgcaacgccgcactaacgcagctcgccctgctcatctac
gatgctctgcggcctcaatacgcagagctgcgttccatcatgaaccagatccccaacatc
cagcctgacctgctcgagcagttcgatcaaaaaaccatcaaccccgcgttgcagaaaatc
ggcgaaaaaaagagaaaagaccagtttaagaagctcatcgcaggagctgtggggaaacct
ctcgggcagcagtttaagaaggaggtccacatacggaaccttccctctctctttaagaag
gtgaaacctaacaaagacgtggtggcaaacagcgagaacaccggattggtcgctctcttt
tcacctgaacacgacgatcattag
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