Silurus meridionalis (southern catfish): 124381567
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Entry
124381567 CDS
T08004
Symbol
rbpja
Name
(RefSeq) recombination signal binding protein for immunoglobulin kappa J region a
KO
K06053
recombining binding protein suppressor of hairless
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
124381567 (rbpja)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeo03000
]
124381567 (rbpja)
Transcription factors [BR:
smeo03000
]
Eukaryotic type
Other transcription factors
Others
124381567 (rbpja)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
BTD
LAG1-DNAbind
TIG_SUH
TIG
RHD_dimer
Motif
Other DBs
NCBI-GeneID:
124381567
NCBI-ProteinID:
XP_046699274
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All DBs
Position
28:1087971..1092717
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AA seq
502 aa
AA seq
DB search
MAPVVTGKFGELPQPKRLTREAMRNYLKERGDQTVLILHAKVAQKSYGNEKRFFCPPPCV
YLMGCGWKKKKEQMEREGCTEQEAQPCAFIGIGNSEQEMQQLNLEGKNFCTAKTLYISDS
DKRKHFMLTVKMFYGNSAEIGVFLSKRIKVISKPSKKKQSLKNADLCIASGTKVALFNRL
RSQTVSTRYLHVEGGNFHASSQQWGAFYIHLLDDDESEGEEFTVRDGYIHYGQTVKLVCS
VTGMALPRLVIRKVDKQTALMDADDPVSQLHKCAFYLKDTERMYLCLSQERIIQFQATPC
PKETNKEMINDGASWTIISTDKAEYTFYEGMGPVTHPVTPVPVVESLQLNGGGDVAMLEL
TGQNFTPNLRVWFGDVEADTMYRCGETVLCVVPDISAFREGWRWVRQPVQVPVTLVRNDG
IIYSTALTFTYTPEPGPRPHCSAAGAILRSGSASSPSSSSSSSMSSSSSSSLLLQSRIDS
QTGFPTTAGVSSSSSSSAMSVS
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctgttgtgacggggaaattcggggagcttcctcagccaaagcgccttaccaga
gaggcgatgcgtaactatttgaaggagcgaggagatcagacggtgctcatactgcatgca
aaagttgcacagaaatcgtacggcaatgaaaaaaggttcttctgcccaccgccgtgtgtg
tacctgatgggctgcggctggaagaagaagaaggagcagatggagagagagggctgcacc
gagcaggaggcgcaaccctgtgctttcatcggcatcggaaacagcgagcaggaaatgcag
cagctcaacctggagggcaagaacttctgcacagccaaaaccttgtacatatccgattct
gacaagaggaagcacttcatgctgacggtcaagatgttctacgggaacagcgcggaaatc
ggcgtcttcctcagcaaacgcatcaaagtcatatccaaaccttccaagaagaaacagtcc
ctgaagaacgcagacctgtgtatagcgtcgggcactaaagtggctctgtttaatcggtta
cgctctcagacagtcagcactcgatacctccatgtcgagggaggaaactttcacgccagc
tctcagcagtggggggccttttatattcacttgttagatgatgatgagtcggagggggag
gagtttactgtgagagacggatacattcactacggtcagactgttaaactggtgtgttct
gtcacgggcatggctttaccgcgtctggtaatccgcaaggttgataagcagactgccctg
atggatgcagatgatcctgtatctcagctccacaagtgtgcgttttacttgaaggacaca
gagcgcatgtacctgtgtctctctcaggaacgcatcatccagttccaggcgacgccgtgc
cccaaagagacaaacaaagagatgattaacgacggcgcatcgtggacaatcatcagcacg
gataaagcggagtacacgttctacgagggcatgggtcctgtcacacaccctgttacacct
gtacctgtggtggagagtttacagctaaacggaggtggtgatgtggccatgctggagctg
actggacagaactttactccaaatctcagagtgtggttcggggacgtggaggcagacacc
atgtacagatgtggtgagaccgttctttgcgtggttcctgacatctcggcgttccgtgag
gggtggcgctgggtccggcaacccgtccaggttccagtcactctggtgcgcaacgacggc
atcatctactccacggcgctcaccttcacctacacacctgagccagggccacgcccacac
tgcagtgccgcaggagccatcctgcgctcaggctccgcctcctcgccgtcgtcttcctca
tcctcctctatgtcttcatcatcgtcatcgagccttttgctacagtcgaggatcgacagt
cagaccggatttccgacaaccgctggtgtttcttcatcatcctcttcctccgccatgtcc
gtgtcctaa
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