Silurus meridionalis (southern catfish): 124381669
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Entry
124381669 CDS
T08004
Symbol
chs1
Name
(RefSeq) chitin synthase 1 isoform X1
KO
K00698
chitin synthase [EC:
2.4.1.16
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo00520
Amino sugar and nucleotide sugar metabolism
smeo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
124381669 (chs1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
smeo01003
]
124381669 (chs1)
Enzymes [BR:
smeo01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.16 chitin synthase
124381669 (chs1)
Glycosyltransferases [BR:
smeo01003
]
Polysaccharide
Structural polysaccharide
124381669 (chs1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Chitin_synth_2
Glyco_trans_2_3
Glyco_tranf_2_3
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
124381669
NCBI-ProteinID:
XP_046699435
LinkDB
All DBs
Position
28:complement(4652029..4662105)
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AA seq
1435 aa
AA seq
DB search
MEDLRNRGQKREGRHRDTWDPFQLNPIGAEKEKKKTCFILVQYFMAVVVGVLVLTSAVIS
KGSLLSLVTLSSPKSLRSSTDRQFYTLLLMCALVTPNLLVFLKCLWKCAFKSFVSPTMKT
MAIISVIEVLVALGTSILVLIVMPQFDVLTNLFISGGVCIGTAFLHAVLRLQHQRWMIIF
PICSIILVFTGYSLLATDYYVRISSYVSDQDQDCYYYVGLAIFASLLVSLNWWENSLQAS
NNIQDMLSELDSFRDSVFMITSLMRIAVTVGIYFLYYGLIAETRIDWSAFTEVKKDTLEV
GLGVFFLQAFCSAACHWFGVVACKIHSVRMSFAMPVSLTGPATLIVGITLFLTQASTLDY
TPETSYLSEAAGNYSTIDNPFLDFCAGIVKMKVSNSTSLILLELTNSICKTSLNSHYAVW
PFSMLALEGVCMWLGLITCTYYVWSMKVPRIERTSQLFVRRLYESAFIDQSLLLNTKMKV
KNPESSEEAENCVIYLCATMWHETYDEMLKILTSMFRLDRYRGDPKEEHKDFFDFECHIY
VDDAFMKDKTTETKLVNSYVDDLINVVIEVYRVFTNKEPDEVSITETPYGGRIAFVLPEG
NMLYIHLKDKLLIRNKKRWSQIMYMYYLLGWKGYIVKNPQKITRQNNVCRASLISLDGEA
YLLPNFDNDSKRKHISDENTYILALDGDTDFHPSAVILLVDRLRMYANVGAACGRIHPTG
MGPMVWYQKFEYAVGHWLQKTAEHVFGCVLCSPGCFSLFRGSALMDDNVLKRYTTKATRA
SEYVQYDQGEDRWLCTLLLQQGWRVEYNAASDAYTNSPQEFKEFYNQRRRWGPSTLANTL
DLLHSGKETAKRNSSISMLYIFYQIFTVASSILGPASVTLMVAGAFQFVFSIAGTLSIVI
AVIPPLVYMLICFFTKSNFQITIAAIFSVLYAFLMTASFFSIIGDMVKEGTFITPTGIFL
VSMAILYFVTALLHPQEFGMIVYGLMYFICIPSGYLLLTIYSLVNMNIVSWGTRESNKEK
EEKKHVGVLCNRNCKLCCWDVNIQVTQETENLMLQQLQQAVNPDGSSAKVESTVLGAEDN
SKPSETDNQPNVENKRGASLRKRDVKHLSNEKEQEDTKSLNSTSDISMDQKTYNSYDDDE
DDDLDAYNDEEEQVIDVVPDSEWVGPVKTVFLRKLTYANLKRNLQEQIRYTLRNKHQEDL
CEELVLMLTDTLNEELKDKVGPEDVLLESQLEELQDALNESARRILKTNRMQFNQMKRLE
ARVKRAIERTLVAPQVTRLNEDETDFWNKLIERYLKPIDDPKSHLEQVERELKSLRNKAV
FLYFIINVLWVVATFFLQAIGSDVISIKIPKYLPNGSLADEPLKVEPLSLMFLLSFAILL
LIQFLAMLYHRVYTLIHVLAYRSTEKDYREKDADEEAMIYENQIINDLVITSDDL
NT seq
4308 nt
NT seq
+upstream
nt +downstream
nt
atggaggacctgaggaataggggtcaaaagagagaggggaggcacagggacacatgggat
ccctttcagctaaatcctattggagccgagaaagaaaagaagaaaacatgttttatctta
gtgcaatacttcatggcagtggttgtaggcgtattggtcctgaccagtgccgtcatcagc
aagggttctcttctatcactggtcacactttccagtccaaaatccctcaggagttctacg
gataggcagttctacacgctactcctcatgtgtgccctcgttacacccaacctgctggtg
ttcctcaagtgtctgtggaaatgtgctttcaaaagctttgtttctcccaccatgaaaacc
atggccattatttcagtgattgaggttctggtggcactgggaacctcgatcttggttcta
attgtgatgcctcagttcgatgtgctgaccaacctgtttatatctggaggtgtctgcatt
ggcacggccttcctgcacgctgtccttcgtcttcagcaccagcgctggatgatcatcttt
cctatttgctcaattattctagtgttcactggctacagcctgctggctaccgattactat
gtgcgaatatcttcctatgtctcagaccaagaccaagactgttactactatgtaggcctt
gctatatttgcttccctgttagtctctcttaactggtgggaaaattctctgcaggccagc
aacaatattcaagatatgctctctgaattagatagcttcagagattctgtgttcatgatc
accagtcttatgaggatcgcggtcactgtcgggatatacttcctttattatggcctaata
gctgagacccgcatcgactggagcgctttcacagaagttaagaaagatacgcttgaggta
ggccttggggtgttttttctgcaagccttctgctctgccgcctgccactggtttggcgtt
gtggcctgcaagatccattccgtgaggatgagctttgccatgccagtctcattgacaggc
cctgctacactgattgtcggcataacactgttccttactcaagcaagcaccttggattat
acacccgagacatcatatctttctgaagcggcaggcaactactcaacaattgataaccct
tttctggacttttgcgccggcattgtgaagatgaaggtctccaacagcacctcactgatt
cttctggaactcaccaacagtatctgcaaaacatcactgaatagccactatgcggtttgg
cctttctccatgttggctcttgagggggtgtgcatgtggctcgggttgattacgtgcacg
tattacgtgtggagcatgaaggtgccgcgtatcgagcggacgtcccagctctttgtgcga
aggttgtacgagtctgcttttattgatcagtcgctacttctaaacaccaaaatgaaagtg
aagaatccagaaagctctgaggaagcagagaactgtgtcatatatctctgtgcaacaatg
tggcatgaaacatatgatgagatgcttaagattcttacctcaatgttcagactggacagg
tacagaggtgatccaaaggaagagcacaaggatttcttcgactttgaatgtcatatttat
gtcgacgatgcctttatgaaagacaaaacgactgagacaaagttggtcaattcatatgta
gatgacctaataaatgtggtcatagaagtatacagagtattcacaaacaaagagccagat
gaagtctctatcaccgaaactccttatggtggccggattgcatttgtgctaccagaggga
aacatgttatatatccatctgaaggacaaacttttaatacgaaacaaaaagagatggtca
cagatcatgtatatgtattatctcctgggttggaaaggttatatagtgaaaaatccacaa
aaaatcactagacagaacaatgtgtgtcgtgcaagtctcatatcactggatggagaggct
tacctcttaccaaattttgacaatgatagcaagaggaaacacatatcagatgagaacacg
tacatcttagctttggatggggacactgacttccacccttcagctgtaattttactggtt
gatcgtcttcgaatgtatgctaatgtcggtgctgcttgtggaagaattcatccaactgga
atggggccgatggtgtggtatcagaagtttgagtatgctgtggggcactggctccagaaa
acagcagaacatgtgtttgggtgtgtgctttgcagccctggatgcttcagtctgttcaga
gggtcagctctaatggatgacaatgtgctgaagcgatacaccaccaaggccaccagggct
tctgagtatgtccaatatgaccaaggtgaggatcgctggctttgcacgctgcttctccag
cagggatggagagtggagtacaacgctgcctcagacgcttacacaaattctccacaggaa
tttaaagagttctacaaccaaaggcgccgctggggtccctcgactctcgcgaatacattg
gatctactacacagtggaaaagaaactgcaaagaggaactcttcaatatccatgctctac
atcttttatcagatcttcactgtggcctcttctatacttggacctgcttctgtcactttg
atggtagctggggcttttcagtttgtgtttagtattgcaggaacactgtccattgtcata
gcagtcataccaccattggtttacatgctaatttgtttcttcaccaaatccaacttccag
attacaatcgctgccatttttagtgttttgtatgcttttctgatgacagcatctttcttc
tccattattggcgacatggtgaaggaagggacgttcattactcctactgggatatttctg
gtgtccatggcaatcttgtactttgttacagcactacttcatccccaggagtttggcatg
attgtctatgggctcatgtattttatatgcatccctagcggttacctcctacttactatc
tactccttggtcaacatgaacatagtgtcctggggcactcgagaatccaacaaagagaag
gaggagaaaaagcatgtgggtgttttgtgcaaccgcaactgcaaactctgttgctgggat
gtaaatatccaagtcactcaagaaaccgaaaacttaatgctccagcaactccagcaagca
gtcaatccggatggttcatcggccaaagtggagtcgaccgtactgggtgctgaggacaat
tcaaaaccttctgaaacggacaatcagcctaatgttgaaaacaaaagaggtgcttcattg
aggaaaagagatgtcaagcatctgtccaatgagaaggaacaagaagatacaaaatcttta
aacagtactagtgacatcagcatggatcaaaaaacttacaattcatatgatgatgatgag
gatgatgacttggatgcgtacaatgatgaagaagagcaagtaattgatgttgtccctgat
agtgagtgggttggaccagtaaagacagtattcctgaggaagcttacctacgcaaatctc
aaaaggaacctgcaggagcagatcaggtacacccttagaaacaagcaccaggaagatctg
tgtgaggaactggtgctcatgctaaccgacactcttaatgaagagctaaaggacaaagtt
ggtccggaggacgttttgttggaaagccaactggaagaactacaggatgctcttaacgag
tcggcaagaaggatcctaaaaaccaaccgcatgcaattcaaccaaatgaagaggctggag
gcaagagtcaaacgagctattgaaagaaccctagtggccccccaggttacaagactgaat
gaggatgagactgacttctggaataagctgatagagcgctacctaaaacccatagacgat
cccaaaagccatctagagcaagtggaaagagaactaaaatccctacggaacaaggcagta
tttctgtactttattataaacgtcttatgggtagtggccacattttttcttcaagccatt
gggagtgatgtcattagcatcaagattcccaaatatttgcccaatggtagtttggctgat
gaacccctgaaggtggaacctctaagtttaatgttcctgctgtcttttgctatccttttg
ctgatccagtttctggcaatgctttaccacagagtgtacaccttgatccatgtgctagcc
tacagaagcacagagaaggactacagagaaaaggatgctgacgaggaagcaatgatctat
gagaaccagattataaatgatctcgtcataaccagtgatgacctgtga
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