Silurus meridionalis (southern catfish): 124381671
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Entry
124381671 CDS
T08004
Symbol
ppp2r2ca
Name
(RefSeq) protein phosphatase 2, regulatory subunit B, gamma a
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03015
mRNA surveillance pathway
smeo04261
Adrenergic signaling in cardiomyocytes
smeo04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124381671 (ppp2r2ca)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
124381671 (ppp2r2ca)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
124381671 (ppp2r2ca)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
smeo01009
]
124381671 (ppp2r2ca)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smeo03019
]
124381671 (ppp2r2ca)
03036 Chromosome and associated proteins [BR:
smeo03036
]
124381671 (ppp2r2ca)
Protein phosphatases and associated proteins [BR:
smeo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
124381671 (ppp2r2ca)
Messenger RNA biogenesis [BR:
smeo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
124381671 (ppp2r2ca)
Chromosome and associated proteins [BR:
smeo03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
124381671 (ppp2r2ca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_EML_2
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
124381671
NCBI-ProteinID:
XP_046699439
LinkDB
All DBs
Position
28:6791..20165
Genome browser
AA seq
447 aa
AA seq
DB search
MGEDESTKINHSFLRDYVTEADVISTVEFNHTGDLLATGDKGGRVVIFQRETECKGDKEE
LGEAGEYNVYSTFQSHEPDFDYLKSLEIEEKINKIRWLPQQNAAHFLLSTNDKTIKLWKV
SQRDRRPEGYNLKDEEGRIKDISTVTSLQVPVLKPTDLMVEVRPRRVFSNGHTYHINSIS
VNSDGETYLSADDLRINMWHLDITDRSFNIVDIKPVNMEDLTEVITAAEFHPQHCHLFIY
SSSKGSIRLCDMRTSALCDTHAKIFEEPEDPGNRSFFSEIISSVSDVKFSHSGRYLLTRD
YLTVKVWDLNMEKGPVETYQVHEYLRSKLCSLYENDCIFDKFECVWNSTDSVIMTGAYNS
FFRMFDRDSGRGVTLEAWRESSKPRAVLRTRRVYTGGRRRRGDVGVDSLDFRKKILHMAW
HPAENIIAIAASNNLYIFQDRVNPENQ
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaggacgagagtaccaagatcaaccacagcttcttacgagactacgtcactgaa
gctgatgtcatttccactgtggagtttaaccatactggggacctcctggccactggagac
aaaggtggacgtgtggtcatcttccagagagagactgagtgtaaaggagataaggaggag
cttggagaggcgggggaatataacgtctacagcacatttcaaagccacgagccagacttt
gattacctgaagagcttagagatcgaggagaagatcaataagattcgctggctgcctcaa
cagaatgctgcccacttccttctctccaccaatgataaaacaataaagctttggaaggtg
agtcaaagggatagaaggccagaaggctacaacctgaaggatgaagaaggacgaataaag
gacatttccactgtcacctcactacaggtgccagtactgaagcccactgatctgatggtg
gaggtgcgtccgaggcgggtcttttcgaatggccacacctaccacattaattccatttcg
gtgaacagtgatggagaaacgtacctgtcagctgatgacctcagaatcaacatgtggcac
ttggatattacagatcgcagctttaacattgtggacattaaaccagtgaacatggaggac
ctgaccgaggtgatcacggcagccgagtttcacccacagcactgtcacctgtttatctac
agcagcagtaaagggtcaatccgcctttgtgacatgaggacatcagcgctgtgtgataca
catgcaaagatctttgaagagcctgaagatccagggaaccgttcgttcttctctgagatc
atttcctctgtttctgatgtcaagttcagccacagtggacgttatctgctaacacgagac
tacctcacggtgaaggtgtgggacctaaacatggagaaaggaccagtagagacataccag
gttcatgagtacctgcgcagtaaactctgctcactctatgagaatgactgcatctttgac
aagttcgagtgtgtgtggaacagcacagatagtgtgatcatgacaggagcctataacagt
tttttccgcatgtttgaccgggactctgggcgaggtgtgacacttgaggcgtggcgtgaa
agcagtaaacctcgtgcagtcttgcgaacacggcgtgtgtacacagggggccgtcgtcgt
cgtggagatgtgggcgtggacagcttggacttccgcaaaaaaatcctgcacatggcgtgg
cacccggcagaaaacatcatcgcaatcgctgcgtctaacaacctttacattttccaggac
agagtaaatccagaaaaccagtga
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