Silurus meridionalis (southern catfish): 124381679
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Entry
124381679 CDS
T08004
Symbol
kitb
Name
(RefSeq) KIT proto-oncogene, receptor tyrosine kinase b
KO
K05091
proto-oncogene tyrosine-protein kinase Kit [EC:
2.7.10.1
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04010
MAPK signaling pathway
smeo04916
Melanogenesis
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
124381679 (kitb)
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
124381679 (kitb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
smeo01001
]
124381679 (kitb)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
smeo04090
]
124381679 (kitb)
Enzymes [BR:
smeo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
124381679 (kitb)
Protein kinases [BR:
smeo01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
124381679 (kitb)
CD molecules [BR:
smeo04090
]
Proteins
124381679 (kitb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
ig
Ig_2
V-set
VEGFR-1-like_Ig-like
Ig_4
C2-set_2
Motif
Other DBs
NCBI-GeneID:
124381679
NCBI-ProteinID:
XP_046699451
LinkDB
All DBs
Position
28:4072064..4090981
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AA seq
956 aa
AA seq
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MARAWILFTVTLLFTFPTGSSKPVITPNGPHLVILKGGQLELHCEDNTRFDPGRLRWHRD
KGRRIEGEQVVDGATVINLASIQPQHMGRYTCENTQTREKSSIYIYVKDMENAFVRSMMS
GLLAKEGEDCTLPCLVTDPAVTHLSPLTCSGTAVPAGLSFTADPQKGIVIHNISKAFEGC
YVCTGVMGGTMVKSSQYNVNVRLVPHFVPVISLSRSESVILMKGEALELICSTSNINHDF
HLMWSFPSGANAIESHASHILPGSWGYKRSSTLWISSAVPSDSGKYRCQAQNEKGVSSST
IRLDVYDRGFINVTEGENRVVDVREGESLTLQIEMISYPKPSAAYWTYNNQQLKNTSEHV
ITLHNQQYRYISELKLVRVHGSEGGIYTFSASHNYTSVNKSFFVHVNCKPMIVSQEGPID
GQVKCVASGYPAPKIFWYYCEPRHTRCSQLMNATQEDEDTAIVTMSLSQFGRTEVESRLN
ITKGKYHTLECVATTQGEQAYTLFSISERTVPHKLFTPVLTGVVTASVVLMLFLIILLYK
YMQKPKYEIHWKVIESIHGNNYTYVDPTQLPYDPKWEFPRERLRFGKVLGAGAFGKVVAA
TAYGLSSPDAVTTVAVKMLKPSAHSTEKEALMSELKVLSYLGNHMNIVNLLGACTVGGPT
LMITEYCCYGDLLNFLRRKRDAFFSSKTGDGYYKNLLSQTQCSREGIENGYMPMRSYEKK
SKQTEWSDDKDDLSIDTEDLLSFSYQVAKGMDFLTSKNCIHRDLAARNVLLTKGRVAKIC
DFGLARDITRDSNYVLRGNARLPVKWMSPESLFSCVYTFESDVWSYGILLWEIFSLGNSP
YPGVPVGSMFYKMIQDGYRMSEPEFAPSEIYEVMRWCWSSDPLKRPTFRKLVERTEMLLC
ENTKHVYLNLSESDSLDCPGLNRASSQRLSSVGSTTASTQPLLLATNDVFLEHDTC
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcgcgtggattctgttcacagtcacacttttattcacctttccgacaggctca
tccaagccagtcatcactcctaatggtcctcacctggtcattctaaagggtggacaacta
gagctacattgtgaagacaacacaagattcgatcctgggagactacggtggcaccgtgat
aagggcaggaggatcgaaggagaacaagtggtagatggagccactgttatcaacctcgct
tccatccagccccaacacatgggccgctatacctgcgagaacactcagaccagagaaaag
agctccatctacatttatgtgaaagatatggagaatgcgtttgtgcgctccatgatgagc
ggcttgctcgcgaaagagggtgaggactgcactttgccgtgcttagtgacagatccagct
gtaacccatttgtctcctctgacctgcagcggcactgccgtgccagctggcctttccttc
acagctgacccgcagaaaggcatcgtcatccataacatctccaaggcatttgagggatgc
tacgtttgcactggtgtcatgggtgggacgatggtgaagtcaagccagtacaacgtgaat
gtgcgactagttccacactttgttccagtaataagtctatccagatcggaaagtgtgata
ttgatgaagggcgaagctctcgagctcatctgcagcacctctaacatcaaccatgacttc
catttgatgtggagcttcccttcaggagcgaatgcaatcgagtctcatgcttctcacatc
ctgcctggatcctggggttacaagcgctcctctacactctggattagctctgcagtgccg
agtgactctgggaaataccgctgccaagcgcagaacgagaagggtgtctccagttctacc
atccgtcttgatgtttatgatcgtggcttcattaatgtaactgaaggagagaacagggtt
gtggatgtgcgagagggagagagtctgacgctgcaaatcgagatgatctcataccccaag
ccaagtgctgcgtactggacgtataacaaccagcagctcaaaaacacttctgagcacgtc
atcacactgcacaatcagcaatacaggtacatcagtgagctgaagttggtccgtgttcat
ggctccgaaggcggcatctacactttctcagctagccataattatacgtccgtcaataag
tcattcttcgtccatgtcaattgcaagccgatgattgtttctcaggaggggccgattgat
ggacaggtgaaatgtgttgcatctggataccctgcaccgaagatattctggtactactgt
gaaccacgacacacacgatgctctcagctaatgaacgccactcaggaggacgaggacaca
gcaatagtgacgatgtcattgtcacaatttggccgcactgaggtcgagagccgcctcaac
atcactaagggaaagtaccacaccctggaatgtgtggcaactacacagggagaacaggca
tacacactcttcagcatcagcgagcgcacagttcctcataaactcttcacccctgtactg
actggagtcgtaacagcttctgtagtgctcatgttgtttctaatcatacttctctacaag
tacatgcagaaacccaagtatgagatccactggaaggtgattgagagtatccacggtaac
aactatacctatgttgaccccacccagcttccttatgaccccaagtgggaatttccaaga
gagaggctacgcttcggtaaagttcttggggctggtgcatttggaaaagtggtggcagca
acagcgtatggtcttagctcacctgacgcagtcacaacagtggctgtaaagatgctcaag
ccgagtgctcactccactgaaaaggaagctctaatgtcggagctaaaggttctcagttac
cttggcaaccacatgaatattgtcaatctgctaggcgcctgcactgtaggaggtccgact
ctgatgataactgagtactgctgttatggcgatctgttgaactttctgaggagaaagagg
gatgcttttttcagctcaaaaaccggagatggatattataaaaatcttttaagtcagacc
cagtgttcaagggaaggaatagaaaatggctacatgccaatgaggtcctatgagaagaaa
tccaaacaaacagaatggagtgatgataaggatgacttgtctattgatactgaggatctg
ctcagcttctcctaccaagtcgccaagggcatggacttcctcacatccaagaattgtatc
catagagatctggcagccaggaacgttttgctgactaagggtcgggttgctaagatctgt
gactttggcttggctcgtgacatcaccagggactccaactatgttttgcggggaaatgca
cgcctaccagtcaaatggatgtctcctgagagcctgttttcatgtgtgtatacatttgag
agtgacgtgtggtcctatggcatcttattgtgggagatcttctctctaggtaacagccca
tatcctggagttccagttggttccatgttctacaagatgatacaggacgggtacaggatg
agtgagccggaatttgctccgagtgaaatctatgaggtgatgagatggtgctggagctcg
gatcctctgaagagaccaacctttaggaaattggtggagaggactgaaatgttgctctgt
gagaacaccaaacatgtgtatttgaacctcagtgaaagcgactcactggattgtcctggc
ctgaacagagcatcgtctcagaggctgagctcagtaggtagcaccacagcatcgacccaa
ccgctcctgctggccaccaacgacgtttttctggaacatgacacttgctaa
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