Silurus meridionalis (southern catfish): 124381761
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Entry
124381761 CDS
T08004
Name
(RefSeq) LOW QUALITY PROTEIN: obscurin-like protein 1
KO
K19574
obscurin-like protein 1
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smeo03036
]
124381761
Chromosome and associated proteins [BR:
smeo03036
]
Eukaryotic type
Centrosome formation proteins
3M complex
124381761
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
V-set
Ig_MYOM1
VEGFR1-3_N_Ig-like
Ig_5
Ig_4
Ig_6
Izumo-Ig
C2-set_2
BiPBP_C
Ig_C17orf99
Motif
Other DBs
NCBI-GeneID:
124381761
NCBI-ProteinID:
XP_046699572
LinkDB
All DBs
Position
3:24540262..24575578
Genome browser
AA seq
3194 aa
AA seq
DB search
MDVFGGAPRFLAYPRPVVVQSGTDAVLKCQIAGDPRPAVIWERNNEKIHPGGRYRVFEDG
NVYNLIITVVTAEDSGQYICKAKNSIGETYAAATLKVEGEAQEMELREENKPRFLIKPLS
TRVGRGDDAVFSCKMWGKPRPEVVWEKDGKKLNDIFESTHFSVGYQDGGWFQLKIFKTRA
PDGGVYTCKARNEFGESLAGAVLLVDAGPGHEDDGNRNGYTNGHWKAHHGKQRGSSHVVT
RLKGDHLPTSAKVKMFAVTEGKHAKFRCYVTGKPKPEIIWRKDGRIILSGRRYLLYEDRE
GYFTLKVLYCKQQDNGVYVCAASNTAGQTLSAVHLFVKEPPVRFKQPLNDLEVWEQDLAI
LECEVPEDSVPITWYLEDRRLQPGAKYGMEEWGTKRRLTIRDMGVDDDGIYLCEMPDGGR
SIAEVTVKGTIVRKMPRKVDVLEGENAAFCVEVEEEEMDIHWYKDGTELRETHQTILKSF
GRTHILVFVNTTXQDSGTVIFYVGRSKTSSQLRVKAIRQCPPSCPVGVQINTERANAALL
SWVPAQDCRKNPPSGYILERQEIGSQEWLQCLTTDSATSVEILGDSVPCEADYRFRICSI
NKYGRSGYVEFPRGVHLVPVAKIQAPLQDALVPEGQDASFSIELSASVIGTWFWNGNQIQ
DDERFLVRRSRTHQSLRIRGVRDTDNGAEITFIAYGIRDSAALYIQAPLVKFTPLSEMDR
NKFVEVGNPIVLYCELSDPGAPVRWYKNGVELHSHEGLHIQSEGTMRRIVIQSAEFFHSG
VYSCDAIDDVIRFNVEVEAPPVRFIALPDVDRNKSIEAGCPIVLQCELSDPSAQVVWYKD
ETKLLPQCGLDFQANGTRRALVVEKAHFFHSGVYRCKTKGAAIQFNVEIQAPLVRFTAGP
ETERRKCIEAGDTMVLQCEISDSSGQVCWFKDGKQILTQSGVGFQSEDCIRRLIIESATP
SHSGVYRCTTKDDVIEFQVDIKAVPVRFSTVSEVEKCKCIQAGSSFELCCEVSDPTADVY
WYKDETEILTDTGWDIQAEGTRRMLIVQSAEPSHSGLYSCNMPDDSVEFTVDIQAPPVKF
SAFPGVVKNRLFEADYPTELHCDISDPPAKVCWYEDGVELLSKSQPHIKMEDTRRKLAVK
VEQPSEAGWQDSLRRDEVIRLNVQDEAPPLKLLDVPHVEKNIGTAESICIAQQYKILDAN
EYNYQTKDKEEILSQDGIESQSQIKCDLPITTFSINSTETPDTGINLSRAPDDHTQFNAD
KAEQSHPEVYKGEHYDDTVQCTVDMKVTKVNISAPQEMSNEKVCEAACLKDLCEVSEKKA
HISALGDLLIVQQEDGKNMMSNLRKEQFAQISKIPHKEVLSTETKNQSVIHQDKVKAPIS
KLVKFAPIPESGMTKTIESGMPLVLQCEISNPDAPVCWFKDGIQLQTKNGLVIQSEDCIR
RLVIPTAELCHTGMYNCEAMDDVIKFKVYVKEARMKGSSLTQTEKNAMKANEEANENVPH
KETVNTSAQVCLYRQEQQQIQERLAVMPSEEIGSEEIKSTELSDSGVYSYETRDTNILST
VDPPVPPVTFSTVAETQRNKSAEVGEPFELECEVSDAAACVCWYKDGNELSSEAGVLLQT
EGTIRKLSVQSSELSHSGTYNCNTDADAVAFNVDIKASSTKLKPLSEMEKNRSAELDSPT
VPKYEISDSKSQVCWYRDDTELLSNIGLDTQRDENVRKLTVQSTEPSYTGHFICGSPDDA
VSFEMDSQATPIRFSALTEVARNKLIEAGCPIILQCEISESSAQVSWFKDGVRLFQENGI
DIKSDGTMRALIIQSAELKHSGTYSCEAGDDRIAFKVDVAAPPVTFAYIPEEELHRNVVE
QEKLFLHCEVSRSDATTQWYKDGVEIQTSTNVEIETEGTMRKLIIQSVRMSDAGAYTCRA
GGSALIFKVNVREPPVMIVYPKEDVHLDRHVPEEIVLSCELSRPNGRVTWFKDGQKLQEN
ENMKLKIEGPYRRLKILHSRVEDSGEYVCDTADDSKFFHLSIKEPPIRIVSPSQSQMELC
QQMSERMVLSCEISRGNASVRWYRNGLEVEENDNLILEVDGVYRRLIIPETTVSDSAEYV
CDTADDSVTFFVNIAEPPVRFIRPRKMAYEVEKFVGETIVLDCEVSRSNAEVSWKKNGEE
ILENINITIVEDGSTRQLTIHSLRLEDTGQYLCDAKDDVMDFSLKVNEPPLRFVQKSEIT
DRHFVVSDAVVLKCELSRANGVVCWYKDNKRIVGNDHFTFEEEGTFRSLIILNAEIADTG
EYVCNVKDEKVVFNVTVEEAPVSILGNTRTPEHHSLVAGNELILECEVSHENAAVQWLCN
GRVLQADTRISIEKKGAMRKLVVSNIQVSDSGEYVCDAIDDKMYILVTVQEPPFEFVKKE
EINIAAYEEESVTLCAVVNRDNGSVQWTKGGKQIRDHRFYATSDGHTHYLTIKHLKKSDA
GEYECDVGTDKARFSVQVKAMKIKFSKPLQNAVGLKGSNVVLRCELQTSKGDVQWLKNNR
EITPNRHFTIRADGQERSLTIHNLTDSDAGEYTCESKDEKTCANVEVKTPRVLEFIAELH
NITVMEGEDATFKCVVSPEDVRIVWCMNNWPITSNDRFKITSNGLCHMLYIKNCQVSDSC
KLTAEAEGVISKALLRVQEKQVLFTKKMESVVAEEFGEATLEVELNLECGEVQWMRQSVV
IHPGPKFTLKQSGRKRMLTIHKLALSDRGTYSCETLHDRTQAGLSVEPRKVKIRKELSEI
HTFERETASFEVELTHSNVEGMWLKDGNRLKSNNHWRMTTHGNVHCLTIANLSLEDTGXL
TFSTENAKSSSRLTVKETPVSILKKLEDSTFPEGAGATLECELSKYNVNVKWKKNGEELK
PGKSHRIYSMGRKCFLQIMRCELGDSGLYVCDAGDATTSCSVEVYERELEVLHTLEDLDI
QEDQNAVFMCEVSLDDIPGEWFKNGEKIKPSSTVKIRQEGTKHFLLMCNVKEEESGEIKF
VAKNVESIAYLEVERIPVNIVKPLEDKTALEHTRVLLDCTVSNPRCSIRWYKGRNVILPS
ERFEICSEGCYRKLVIQEVALEDTGMYSVQVGENTSSARLTVEAQPILIVQELQDMEVVS
PEDACFVCEVSVPVLKSPVWTLNGEVLKPGPKVLLEKMGTVHKLTLKHTTEDMNGVVVFD
SGKAKSTANLHVRK
NT seq
9585 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgttcggtggagcaccccggttcctggcctaccctcgtcctgtggtggtgcag
agcggcactgatgcagtccttaaatgccagattgctggagatccccgaccagcagtcata
tgggagagaaacaatgaaaaaatccatccaggtggcagatatcgtgtgtttgaggatggc
aatgtttacaatctcatcatcactgtggtgacagctgaagacagtggccagtacatttgc
aaagctaaaaacagcataggggagacatatgctgcagcaacactgaaagtagaaggtgaa
gctcaagagatggagctgagagaagagaacaagccccgttttctcattaaacccctgtct
acgcgagttggccgaggagatgatgcggttttctcctgtaagatgtggggaaaacctagg
ccagaggtggtgtgggagaaggatggcaagaagctaaatgacatctttgagagtacacat
tttagtgtcgggtaccaggatggcggttggtttcagctaaagatttttaaaacccgggca
cctgatggcggagtgtacacgtgcaaagcaaggaatgagtttggtgaaagtctggctgga
gctgtgctgttggtggatgctggccctggacacgaagatgatggaaaccgcaatggttac
actaatggccattggaaagcacaccacggaaaacagagaggcagtagccatgttgtaaca
aggctaaaaggagaccatctgccaacttcagccaaagtaaaaatgtttgctgtgacagaa
ggaaagcatgcaaaattccgttgctatgtgacaggaaagcccaaaccagaaatcatatgg
agaaaagatggaagaataattttgtctggaaggcggtaccttttatatgaagacagagag
ggatacttcacacttaaagtactttactgcaaacagcaggataatggagtgtatgtttgt
gctgcatccaatactgcaggacaaaccttaagtgcagtacatctttttgttaaagaacca
cctgtaagattcaagcaacccctcaatgaccttgaagtctgggagcaggacctggccatc
cttgaatgtgaagtaccagaggactccgtgcccatcacatggtatttagaagatagaagg
ctacagccaggggccaaatatgggatggaggagtggggaacaaagcgccgacttacaatt
cgtgacatgggagttgatgatgatgggatctacctctgcgaaatgccagatggaggaaga
agcatagctgaggtaactgtcaaaggtacaatcgtaagaaagatgcccagaaaagtagat
gttctggaaggggaaaatgctgcattttgtgtggaagtagaagaggaggaaatggatatt
cactggtacaaagatggcacagagctgagggaaacacatcagactatcctcaaatcattt
gggagaactcatatcttggtctttgttaatactacancccaagattctggcacggtcatt
ttctatgttggcagatcaaagacatcatctcagctaagggtcaaagcgattaggcaatgt
ccacctagctgccctgtgggggttcagataaacacagagcgtgcaaatgcagcacttctg
tcctgggttccagcacaggactgtcggaagaatccaccctcaggttacatcttagagaga
caggaaataggttcccaggagtggctccagtgcctaaccactgactcggcaacctcagtg
gaaattcttggtgacagtgttccatgtgaggctgactacagattccgcatctgtagtatc
aacaaatatggaagaagcggatatgtggagttccctcgaggagttcatctggttccagta
gcaaaaatacaagcacctctacaagatgcacttgtgcctgagggccaagatgccagtttt
tccattgagctgtctgcctcggtcataggcacttggttttggaacggcaaccaaattcag
gatgatgaacggtttctcgttagacggtctcgtacacaccaatcacttcgaattcgaggg
gtacgagacactgacaatggagctgaaatcacctttattgcatatggaattcgtgattca
gcagcactgtatatacaagctccattagttaaatttactccactatctgagatggaccgg
aataagtttgtagaagtaggcaatccaatagtcctctactgcgagctgtcagaccccgga
gcaccagtccgctggtataagaatggagttgaactgcattcacatgaaggtcttcacatt
caatcagaaggaacaatgaggagaattgtcatccagtcagctgagttcttccattccggg
gtttacagttgtgacgccattgatgatgtcatcaggtttaatgtggaagttgaagcacca
cctgtgaggttcatagcacttccagatgtggatagaaacaagtccattgaagctggatgt
ccaatagtactgcaatgtgagctctccgatccaagtgcccaggtcgtctggtacaaagat
gaaacaaaacttctcccacagtgtggactagacttccaggctaatggaactagaagggca
ctggtagtcgagaaggcacatttttttcactctggggtgtacagatgcaagacaaaaggt
gctgccatccagttcaatgtggaaatccaagctccactagtgagattcacagctggtccc
gaaactgagaggagaaagtgcattgaagcaggagacaccatggttctacagtgcgagata
tcagactcatctgggcaggtttgctggttcaaggatgggaagcaaattcttacccagtct
ggtgtaggcttccaatcagaagactgtataaggagattaattatagaatcagcaaccccg
tctcactctggtgtgtacaggtgcacaacaaaagatgatgtcattgagtttcaagtcgat
atcaaagctgtgccagtgcggttctcaactgtttcagaagttgagaagtgtaaatgcatt
caagctggcagctcttttgaactctgctgtgaggtatcagatcctacagcagatgtttac
tggtataaggatgaaacagagattctcacagacactggctgggacatacaggcagaaggc
acacggaggatgctgatagtccaatcagcagagcccagccactccggattgtacagctgc
aacatgcctgatgactctgtagagtttactgtggatattcaagctccaccagtgaagttc
tcagccttcccaggtgttgtgaagaacaggctgtttgaagcagactaccctactgagcta
cactgtgacatctcagacccaccagctaaggtgtgttggtacgaagatggagtagagctc
ctctcaaaaagtcaacctcatatcaaaatggaggataccaggagaaagcttgctgtaaaa
gtagagcagccctccgaggccggatggcaagactctctgagaagggatgaggtcatccgg
ttaaatgtacaagatgaagcgccacctttgaaactgctggatgtccctcatgttgagaag
aatataggtactgcggaaagcatctgtattgcacaacaatacaaaatcctggatgccaat
gaatataattaccaaacaaaagacaaggaagagatactgtcacaagatggaattgaatcc
caatctcaaattaagtgtgacttgcctataacaacttttagcatcaattcaactgagaca
ccagacactgggataaacctgtcaagggcgccagatgatcacacccagtttaatgcagac
aaagccgagcagtctcaccctgaagtgtacaagggtgagcactatgatgacactgtccag
tgcactgtggatatgaaagttacaaaggtgaatatctcagcacctcaagaaatgtccaat
gagaaagtctgtgaagcagcctgtctcaaagacctatgtgaagtctctgaaaagaaggcc
cacatatctgcacttggagatcttttaatagtccagcaagaagatgggaaaaacatgatg
tctaatctgagaaaggaacaatttgctcagatatcaaagattccacacaaagaggtcctg
agcaccgagaccaagaatcaatctgtgatccatcaagacaaagtaaaagcaccaatatct
aagctagtaaaatttgcaccaatccctgagtctggcatgactaagaccattgaaagtggc
atgcctctagtgctacagtgtgaaatatcaaacccagatgccccagtttgttggtttaag
gatggaatacaacttcaaacaaaaaatggattagtgatccagtcagaggattgcattaga
cggctggtcattccaactgcagagctctgccacacagggatgtacaactgtgaggcaatg
gatgatgtcataaaatttaaggtgtatgtcaaagaggcacggatgaaaggttcatcactc
actcagactgagaagaatgcgatgaaagccaatgaagaagccaatgaaaatgttccacac
aaagagacagtaaatacttcagctcaggtctgcttgtacagacaagagcaacaacaaatt
caagagcgtcttgctgttatgccatcagaagagatcggatcagaagagatcaaatcaact
gagctgtctgactcgggagtatacagttacgaaacaagggataccaacatcctgagtact
gtggatccaccagtgccaccagtgacgttctccactgtcgctgaaacccagaggaacaaa
tctgctgaagttggagagccatttgaattggaatgtgaggtctcagatgctgccgcatgt
gtatgctggtacaaagatggaaatgagctgtcatctgaagctggagttttgcttcagact
gaaggtacaattagaaaactttctgtgcagtcatctgaattatctcacagtggaacttac
aactgcaacacagatgctgatgcagttgcattcaacgtggatattaaagcttcgtctacg
aagttaaaaccactttcagaaatggagaagaacaggtccgctgaattagactcaccaact
gttccaaaatatgaaatctcagactccaaaagccaggtttgctggtatagagatgacaca
gaactcctctcaaacattggacttgatacccaaagagatgaaaatgtaaggaaattaact
gttcaatcaaccgaaccttcatacactggccatttcatctgtggcagtcctgatgatgct
gtatcattcgagatggacagtcaagctactcccataaggttctcagcccttacagaggtg
gcaagaaacaagttaattgaagcaggctgccccattatacttcaatgtgaaatctctgag
tcttctgcccaagtttcctggtttaaagacggagtgcgactctttcaagagaatggaatt
gacatcaaatcagacggcaccatgcgagcactgatcatccaatcagctgagctcaaacac
tcgggcacatacagttgtgaagctggcgatgatcgtatagcattcaaggtggatgttgca
gcacctcctgtgacatttgcctatatccctgaggaagagctccacaggaatgtagtggaa
caagaaaaactcttccttcattgtgaggtgtccagatctgacgccactacacagtggtac
aaagacggagtggagatacagaccagtaccaatgtcgaaatagagactgaaggcaccatg
cgaaaactgattatccaatctgttagaatgtcagatgctggggcatacacatgtcgtgca
ggaggcagtgccttaatattcaaggttaatgtacgagagcctcctgtaatgattgtctat
cccaaggaagatgttcaccttgatcgacatgttccagaggaaattgtcctcagttgcgag
ctttcacgtccgaatggaagagtgacttggttcaaggacggacagaaacttcaagaaaat
gaaaatatgaaattaaaaatagaaggtccatacaggagactgaagattcttcacagcaga
gttgaggactcaggagagtatgtctgtgacactgctgatgactcaaaattcttccattta
agtataaaagaacccccaatacgcatagtttccccaagccaatcccaaatggaactgtgc
cagcaaatgtcagagaggatggtgctgagttgtgaaatttccagaggcaatgcttctgtg
cgctggtatcgaaatggacttgaggtagaagagaatgacaacctgattcttgaggttgat
ggtgtttacagaagactcattataccagagacaacagtcagtgattctgcagaatatgtt
tgtgacacagctgatgactctgtgacattcttcgtaaacattgcagagcccccggtacga
tttattcggcctaggaagatggcatacgaagttgaaaagtttgttggagaaaccattgtg
cttgactgtgaggtgtcaagatcaaatgcagaagtcagttggaagaagaatggagaagag
attttggaaaatatcaatataactatagttgaggatggcagtactcggcagttaacaatt
cattcattaaggcttgaagacacaggccaatacttgtgtgatgccaaagatgatgtaatg
gatttcagtttaaaagtaaatgaaccaccactcagatttgtgcaaaaaagtgagataaca
gacagacattttgtagtatcagatgccgttgtgctcaaatgtgaactgtccagagcgaat
ggtgtagtctgctggtacaaggataataaaaggattgtgggtaatgatcacttcacattt
gaagaagaaggcacctttagatctctgatcatcttaaatgcggagatcgcggatactggt
gaatacgtgtgtaatgtgaaggacgagaaggttgtctttaatgtcacagtagaagaggca
ccggtgtctatcttaggaaacactaggaccccagaacaccactcactcgtggctggaaac
gagctgatccttgaatgtgaggtgtctcatgagaacgctgctgttcagtggctctgtaat
gggagggtattgcaggcagatacccgaatcagtattgaaaagaaaggtgctatgagaaaa
cttgtggtctccaacattcaagtgtctgactcaggagaatacgtatgtgatgccattgat
gacaaaatgtacatcttggtgacagttcaagagccaccattcgagtttgtcaaaaaagaa
gagataaacatcgctgcctatgaagaggaaagcgtgacattgtgtgctgtggttaacagg
gataatggatctgtgcaatggaccaaggggggcaaacaaatcagagatcatcgtttttat
gccacaagcgacgggcatactcactacctgactataaagcatcttaaaaaatcagatgcc
ggagaatatgagtgtgacgtgggcacagataaagctcgtttcagcgtgcaagtcaaagct
atgaagataaaattttccaagccactgcaaaatgcagtagggcttaagggtagtaatgtt
gttttaagatgtgaactccaaacctccaaaggagatgtccagtggctgaaaaacaaccga
gaaatcacaccaaaccgacattttacaatccgtgcagatgggcaagaaagaagccttaca
atacataacttaacagacagtgatgcaggggaatacacatgcgaatcaaaggatgagaaa
acatgtgcaaatgtagaagtaaagacccctcgtgttctggagtttattgctgagttgcac
aacataactgtaatggaaggagaagatgcaacattcaagtgtgtagtgtccccagaagat
gtaaggatagtctggtgtatgaacaactggcctattacatcaaatgaccggttcaaaatc
acaagtaatggactgtgccacatgttgtacatcaaaaactgccaagtgtcagacagctgc
aagctaacagcagaagctgaaggagtgatatccaaagctctgctacgggttcaagagaaa
caggtgctgttcacaaagaaaatggaatcggtggttgcagaagagtttggggaggcaact
cttgaggtggagctgaacttagaatgtggagaagtgcagtggatgagacaaagtgtggtc
atacaccctggacctaagtttaccctgaaacaaagtggccgaaagcgtatgctcacaatc
cacaaactcgccctttctgatcgtgggacttacagctgtgaaactcttcatgaccgcaca
caagctgggctcagcgtggaaccacggaaagttaaaatacggaaagagctgagcgagatt
catacgtttgagcgcgagacagcatcctttgaggtggagctgacacatagcaatgtggaa
ggcatgtggctgaaagatggaaaccgactcaaaagcaacaaccattggcgcatgactacc
catggcaatgtgcattgcctgaccatagccaacctgtcacttgaggacacgggannactt
acattctccactgaaaatgcaaaatcatcttccagacttacagttaaagaaacaccagtg
tctattctgaaaaagctggaggatagcactttcccagagggtgcaggagccacactggag
tgtgagctgtccaaatacaatgttaatgtcaaatggaaaaagaatggagaagagcttaag
ccagggaaaagtcatcgtatctactccatggggaggaagtgcttcctgcagatcatgcga
tgtgagcttggggattcgggtttatatgtgtgtgatgctggagatgcaaccacttcatgc
tctgtggaagtttacgagagagagctggaagttttacacactctagaagacctggatatt
caagaggaccagaatgctgtgtttatgtgtgaggtgtctcttgatgacatacctggagag
tggtttaagaatggagagaaaattaaaccttctagcaccgtcaagatccgtcaggaggga
accaagcacttccttcttatgtgcaacgttaaggaagaggaatcaggagaaatcaagttt
gttgccaagaatgtggagtctatagcttacctagaggtggagagaatccctgtgaatatt
gtaaagccgctggaagacaaaacggctctggaacacactcgagtcttactggattgtact
gtatccaacccacgctgcagcattcgttggtataaaggccgtaatgtgatcttgccctca
gaacgctttgagatctgcagtgaaggctgctatcgcaaacttgtgattcaggaggtcgca
ctggaggacacaggcatgtacagtgtgcaggtcggagaaaacacatcctcagcaaggctc
acagtggaagcccagccaatcctgatagtgcaggagcttcaagatatggaggtggtctct
ccagaggatgcatgttttgtgtgtgaggtctctgtgcctgttttaaaatcacctgtatgg
actctaaatggagaggtgttaaaacctgggcccaaagttctcctggagaaaatggggaca
gtgcacaagcttaccctgaagcacacgacagaggacatgaatggtgttgtggtgtttgat
tcaggaaaggccaagagcacagcaaacctgcatgtcagaaaataa
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integrated database retrieval system
