Silurus meridionalis (southern catfish): 124381762
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Entry
124381762 CDS
T08004
Symbol
nup85
Name
(RefSeq) nuclear pore complex protein Nup85
KO
K14304
nuclear pore complex protein Nup85
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124381762 (nup85)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smeo03019
]
124381762 (nup85)
03036 Chromosome and associated proteins [BR:
smeo03036
]
124381762 (nup85)
Messenger RNA biogenesis [BR:
smeo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124381762 (nup85)
Chromosome and associated proteins [BR:
smeo03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
124381762 (nup85)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
124381762
NCBI-ProteinID:
XP_046699570
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Position
29:10224214..10232947
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AA seq
651 aa
AA seq
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MEELDVEPTTTLIPGAGLKQKHLGFEWGPGDLLMYETNFKLQGPSTGGSDRPSIFWLRRD
EDIYSPILRKLFNESHHIFVGLQNIKDDVPSKNKKAQFVSISKNYRSVIRACMEELQQVA
VSTTDTQYSNQVSILLAIELIWNLCEVLFIDAAPAGSLLLHLLDWVRLHKADVDEKAREV
LQSESPARHHAYWDVVISFVLQGRMDEARQVLQKQASLQPASRATYQLMDSLLHKMPVFN
PGSTQTLTEFDMKWRHWHEECDRCLQDNSFASNRQLETICKVLVGDEDALLEQKELLGTW
YHLLISRLLFSHPTVKPAELHYYAQSSMDMFLESHSVPEPLDSILLAAFEFDLHQVIKDC
SIALNNWWFVAHLTDLLDHCKLLQSHNLHFGSNLREFLVLEYASGLFSHHSLWQLAVDYF
DHCPEFGRVYLELQIERVPLETERKALKVLRICEQRQMNEQVRSICKIMAKRALSNNRLG
SALSWSIRAKDAAFATLISERFLQDYCTRGSFSDLDLIDNLGPAMLLSDRLTFLGKYREF
HRLYEDKKFTEAAKLLLSLMTAKIAPRSFWMTLLIDALPLLEQKEVIFSVDQTHELMFCL
EELTSNNNELKSEHRAQDDDDDVESTKLELLRLALARNLAMAIVKEGTVEA
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atggaggaattagatgtggagccgacaacaacgctaatcccaggcgcgggtcttaaacag
aaacatctgggctttgagtggggaccaggagacctgctgatgtacgagaccaacttcaaa
ttacaaggtcccagcactggaggctctgatcgtccttccatcttctggttgcgcagagac
gaggacatctattcacccatcctgcgtaagctcttcaacgagtctcatcacatcttcgtc
gggctgcagaacattaaagatgacgttccgagcaaaaacaagaaagcacagtttgtgagc
atcagtaagaactacaggtctgtaatacgagcctgtatggaagaactgcagcaggtcgca
gtatcgactacagacacacagtacagtaaccaggtgtccattctcttagcgatcgagctg
atctggaatctgtgtgaagtgcttttcatcgacgcagccccggccggctctctgctgctg
cacctgctggactgggtgcgtttacacaaagctgacgtggatgaaaaggcgcgcgaggtc
ctgcagagcgaaagccccgcacgtcatcacgcttactgggacgtggtgattagttttgtc
ctgcagggacgcatggacgaggctcgacaggttctgcagaaacaggcgtctctccagccg
gcatccagagccacgtatcagctcatggacagcctgctgcacaaaatgccagtgtttaac
cccggcagcactcagaccctcacagagtttgatatgaagtggaggcactggcacgaagag
tgcgaccgatgtctccaggacaactccttcgccagcaaccgtcagctggagaccatctgc
aaggttctggttggtgatgaggacgctctgttggaacagaaagagctgctgggaacctgg
taccatttactgatcagccgccttctgttctctcatcctactgttaaacccgctgagctg
cactactacgctcagtcgagtatggacatgttccttgagtctcacagtgttccagaacct
ctggacagcatcttactggctgcatttgagttcgaccttcaccaagttattaaagactgc
agcattgccctgaataactggtggtttgtggctcatctgactgacctgctggatcactgc
aaactcctgcagtcacacaaccttcattttggctctaacctgcgggagttcctggtgctg
gagtacgcctctggactcttctcacatcacagtctgtggcagctggcggtggattatttc
gatcactgccccgagttcggtcgtgtgtacctggagctgcagatcgagagagtgccgctg
gagacggagcgcaaagcgctaaaagtgctcaggatctgcgaacagagacaaatgaacgag
caagtacgcagtatctgtaagatcatggctaaaagggctctcagtaacaacagactgggt
tctgctctgtcctggagtatcagagctaaagacgcagcattcgccacactcatatccgag
aggtttctgcaggattactgcacacgtggctcgttctctgatttggatctgatcgataac
ctcggacctgccatgctcctcagcgacagactcacattcctcggaaagtaccgtgagttc
catcgtctgtatgaagataagaagttcaccgaagcggcaaagctcctgctttccctcatg
acagcgaagatcgctcctcgtagtttctggatgactctgctcattgacgccctgccctta
ctggagcaaaaagaggtgatcttttcagtggatcagacccatgaacttatgttttgtctg
gaagagttgacctcaaacaacaacgagctcaaatctgagcatcgagcacaggatgacgat
gatgatgtcgagtccacaaaactggagcttctgcgattagctttggcgcgtaacctggcg
atggccatcgtgaaggagggaacagtcgaggcctaa
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