Silurus meridionalis (southern catfish): 124381766
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Entry
124381766 CDS
T08004
Symbol
ctdsp1
Name
(RefSeq) carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1
KO
K15731
carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:
3.1.3.16
]
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
smeo01009
]
124381766 (ctdsp1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smeo03021
]
124381766 (ctdsp1)
Enzymes [BR:
smeo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
124381766 (ctdsp1)
Protein phosphatases and associated proteins [BR:
smeo01009
]
HAD phosphatases
Fcp/Scp phosphatases
124381766 (ctdsp1)
Transcription machinery [BR:
smeo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
124381766 (ctdsp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NIF
Motif
Other DBs
NCBI-GeneID:
124381766
NCBI-ProteinID:
XP_046699586
LinkDB
All DBs
Position
3:complement(24576451..24610400)
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AA seq
264 aa
AA seq
DB search
MDAPSSIITQVSRDEEPSAPLRDKGAPVHAASNSKKPRNRGFFRSLFCCMCHDETDQLPV
NNNAPLLVEENGTISKVPAKPLLPQSKSKDAGKICVVIDLDETLVHSSFKPVNNADFIIP
VEIDGAVHQVYVLKRPHVDEFLKRMGELFECVLFTASLAKYADPVSDLLDKWGAFRCRLF
RESCVFHRGNYVKDLSRLGRDLNKVIIVDNSPASYIFHPDNAVPVASWFDDMADTELLDL
IPFFERLSKVDDVYAVLKQQRTSS
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgccgtcatccatcatcacgcaagtgagtcgggatgaagagccgagcgctcct
ctgcgggacaaaggtgctccagtgcatgcggcgtcaaactcaaagaagccacgcaaccgc
ggctttttccgcagtctcttttgctgcatgtgtcatgacgaaacagatcagctgcccgtc
aataacaacgcgccgctcctggtggaagagaatggaaccatctcaaaagtgcctgccaag
ccgcttcttccgcagagcaaatctaaagacgcgggaaaaatttgcgtagtgatcgatctg
gacgagacgctagtgcacagttcgtttaagccggtgaacaatgctgattttatcattccg
gtggagatcgatggggctgtacaccaggtgtatgtactgaagcgacctcatgtcgacgag
ttcctaaagcggatgggcgaattatttgagtgcgtgctgttcactgcaagcttagccaag
tatgcagatcccgtgtcggacctgctggataagtggggtgccttccgctgccgtctcttt
cgagaatcctgcgtgtttcaccgtggaaactatgttaaggacctgagccgcctgggcagg
gacctcaacaaagtcatcatcgtggataactctccagcatcatacatcttccacccagac
aatgctgtccccgtagcctcttggtttgatgacatggccgacactgagctgttggatttg
atcccgttcttcgagagactgagtaaagtggacgacgtgtacgctgtgctcaaacagcag
aggactagcagctaa
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