Silurus meridionalis (southern catfish): 124381833
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Entry
124381833 CDS
T08004
Symbol
itgb2
Name
(RefSeq) integrin beta-2
KO
K06464
integrin beta 2
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04145
Phagosome
smeo04514
Cell adhesion molecule (CAM) interaction
smeo04517
IgSF CAM signaling
smeo04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
124381833 (itgb2)
04517 IgSF CAM signaling
124381833 (itgb2)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
124381833 (itgb2)
09142 Cell motility
04810 Regulation of actin cytoskeleton
124381833 (itgb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124381833 (itgb2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smeo04147
]
124381833 (itgb2)
04515 Cell adhesion molecules [BR:
smeo04515
]
124381833 (itgb2)
04090 CD molecules [BR:
smeo04090
]
124381833 (itgb2)
Membrane trafficking [BR:
smeo04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
124381833 (itgb2)
Exosome [BR:
smeo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
124381833 (itgb2)
Cell adhesion molecules [BR:
smeo04515
]
Integrins
Integrin beta subunits
124381833 (itgb2)
CD molecules [BR:
smeo04090
]
Proteins
124381833 (itgb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
Integrin_b_cyt
PSI_integrin
EGF_integrin
EGF_2
EGF_TEN
vWA_SIBA-E
EGF_Teneurin
I-EGF_1
Motif
Other DBs
NCBI-GeneID:
124381833
NCBI-ProteinID:
XP_046699664
LinkDB
All DBs
Position
3:complement(22641257..22652626)
Genome browser
AA seq
772 aa
AA seq
DB search
MPQANKIILLLLFGRYVFSQEECIKSIVGSCDECIMSGPGCAWCTELNFTKPGEPEAVRC
DTSKNLQERGCPNDSRMIINPKSALYIRTNKPLSGPQKTENPVQVQPQAIELNLRPGEAF
TFNFSFKRAEGYPVDLYYLMDLSYSMGDDLKNVKNLGIEILKKLQQITGNARIGFGSFVD
KTLLPFTDTAEEKLKKPCPAKEKQCQPAFGYQHVLSLTKDEKIFFEKVSLQNISGNLDMP
EGSLDAIMQVVTCVDKIGWGDSTRLLVLATDAGFHMAGDGKLAGILEPNQETCQLDINNK
YSKSNTWDYPSVGQIARKLEEQNIQPIFAVTKNVSQIYEELSKLIPKSEVGVLSNDSSNV
VNLIVEAYNKLSSNIIVTHDGLPEGISVTFTSKCKGGERPSDKGICNNVNIGQEVIFSVT
VKAAKCLDSNFSIGPLGFNEKLKVSVKTRCKCECDNQDIVHDFCNREGKIVCGTCSCNPN
FLGQRCECSVEKKDEVALKAQCRKDNGTECEGRGDCKCGVCKCHQTEGGQSYYGPHCECD
DEHCEKFQNKLCGGNGTCRCGECKCNAGYEGSACQCKKSDESCVTGETVCHGRGKCVCNQ
CACERGYKGIRCDTCPTCELPCEKSGSCVECKAFNTGPLDKSCDESCSHLKVTVDEKLAK
RDCQVKDEEGCRMIFSMTPQDGFDRYYVNVLKDRECPEGPNVGRIVGGSLAAVALIGLLL
LILIKAIFYFKDLKEWKRFEKEAQRRQWAKSENPLFQKATTTVANPAFTGDS
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgccacaagcaaacaagatcattctcctgctgttatttggaagatatgtcttctctcag
gaggaatgtataaaatcaatcgtggggtcatgtgatgaatgcattatgtctggacccgga
tgtgcctggtgcacagaattgaatttcaccaagcctggagagccagaagcagtacgatgt
gacacttcaaagaatcttcaagaaagaggctgcccaaatgatagtcgaatgataattaac
ccaaagagtgctctttacattcgaaccaacaaaccactgtcaggaccacaaaagacagaa
aatccagttcaggtgcagccacaagcaattgaactcaatttacgtccaggtgaagccttc
actttcaacttctcatttaaaagggcagaaggctaccctgtggatctgtactatctgatg
gatttgtcctactcaatgggtgatgacttgaaaaatgtgaaaaacctgggaatagaaatt
cttaaaaaactacagcaaatcactggaaatgcaaggataggctttggctcgtttgtcgat
aaaacacttcttccattcacggacacagccgaagaaaagttaaaaaagccctgtccagcc
aaagaaaaacaatgccagccagcatttggctatcagcatgttctcagtctgacaaaggat
gagaaaatcttttttgaaaaagtatccttgcaaaacatatctggcaacttggacatgcca
gagggcagtctggatgccatcatgcaagttgtcacttgtgtggataaaattggctgggga
gacagcacacggctgctggtgctggccactgatgctggtttccacatggcaggtgatggg
aaacttgctggcatcctcgaaccaaaccaagagacttgtcagctggatattaacaacaag
tacagcaagagcaacacttgggattacccatctgttggtcagatagccaggaagttggaa
gagcaaaacatacagcctatatttgctgtaactaaaaatgtatcccaaatatatgaagag
ctgagtaaactgattcctaaatcagaagttggagtactaagtaatgattcaagcaatgtg
gtaaatctaattgtggaagcatacaataaactctcctcaaatattattgtgacacatgat
ggactcccagaaggcatatcagtaacattcacatctaaatgtaagggtggagagaggcct
agtgataaagggatatgcaacaatgttaacatcggacaggaggtaattttcagtgtaact
gttaaggcagcaaaatgcctagattcaaacttcagcattggtcctttggggttcaatgaa
aaactgaaggtttcggtaaaaacacgatgtaagtgtgaatgcgacaatcaggacatcgta
cacgatttctgtaatagagaaggaaaaattgtctgcggaacatgcagctgcaacccgaat
ttcctgggacagcggtgtgaatgcagtgtggaaaagaaagatgaggtcgcattgaaggct
caatgccgcaaagataacgggacagagtgtgagggtcgtggagactgcaagtgtggagtg
tgcaagtgccaccaaactgaggggggtcaatcctactacggtcctcactgcgaatgtgat
gatgaacactgtgaaaagttccaaaacaaattgtgtggagggaacgggacttgcagatgt
ggagaatgtaaatgcaatgctggctatgaaggatcagcctgtcagtgcaagaaatccgat
gaaagttgtgtgacgggagaaactgtgtgccatggacgtggcaaatgtgtgtgtaaccag
tgtgcttgtgagaggggatacaaggggatcagatgtgacacatgtccaacttgtgagttg
ccttgcgaaaagtcagggagctgtgttgaatgcaaagcatttaacacgggaccattggat
aagagctgcgatgaatcctgcagccatcttaaagttacagtagatgaaaaactggcaaaa
agggattgccaagtcaaggatgaagagggttgccggatgatcttctcaatgactccgcaa
gacggatttgaccggtattatgtgaacgtcctgaaagacagagaatgtccggaggggccg
aatgttggacgcatagtgggtggatctcttgccgctgtggctttgattggacttctactc
ctcattctcattaaggcaatattttatttcaaagacctcaaagagtggaagaggtttgaa
aaggaagcacagcgccgtcagtgggcaaaaagtgaaaatccattgtttcagaaagcaaca
acaactgttgcaaatccagcatttactggagactcttaa
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