KEGG   Silurus meridionalis (southern catfish): 124381919
Entry
124381919         CDS       T08004                                 
Symbol
ubap2l
Name
(RefSeq) ubiquitin-associated protein 2-like isoform X1
  KO
K26545  ubiquitin-associated protein 2
Organism
smeo  Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:smeo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:smeo04121]
    124381919 (ubap2l)
   03400 DNA repair and recombination proteins [BR:smeo03400]
    124381919 (ubap2l)
Ubiquitin system [BR:smeo04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Multi subunit type E3 associated proteins
    124381919 (ubap2l)
DNA repair and recombination proteins [BR:smeo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     124381919 (ubap2l)
SSDB
Motif
Pfam: UBAP2-Lig UBA_RAD5A UBA_4 UBA_8 RES GIP1_N CUE
Other DBs
NCBI-GeneID: 124381919
NCBI-ProteinID: XP_046699803
LinkDB
Position
29:3738889..3774745
AA seq 1195 aa
MMTSVGGNRNRANWEQTQTQSQSQHKQRPQATAEQIRLAQMISDHNDADFEEKVKQLVDI
TGKDQDESMIALHDCNGDVNRAINVLLEGSPDTDSWEMVGKKKGVSGQKENAQTDGGEEG
KENRERGGERDAARRRGGAPRRGRGTSRGREFHGQENGVDATKAGGIAGRGTERGRRGRG
RGRGGAGRRGGRFSAQGMGTFNPADYAEPAQTEENYAMGSTWSNTGNLEPEDGARLDFSG
GDGTNYPRKFDSAPGAWRTPTEEWGTEDWTEDLSETKIFTASSVVSMPVPQENVTITAGQ
RIDLAVLLGKTPPSSSSEKESAPLDAAQPQSLSQSLVFSNSKQSVSIPQPSSSTSYNQHS
MVSMLSKGFGEVGDSKGTSGNSTSGSQFLEQFKTAQALAQLAAQHSQGGPSSTGPSSWES
SPAPLAQYDMKTQTDAAGHSPFTKRQPYQPTSSSASSMMDAFLQEKGPTPSTASSMPTHS
TSLAQTVSALKPSGSAVSQQQIPSGPSEPQASSPLPLQQHKLKHQKKRTSISTKIPALAV
EMPGSADIPGINLQFGALQFGSEPVLPEYDNTAVATTTPGSATQNSLYTSANSEQAPALP
SAIQMDLYEQRASQTRRYPPSVSSSPQKDLQPKNGFSSIPTTQSLEAAAGSAVSVKTASD
SNVPPTVSNMASLSDPPQGPASLLTTSSQTQLAPLGHEDPSSITIAPPQHNALSTPQNSM
ASSTVRTSSTSLLHPNMDGDSSLHSSSFSVSAVAPSAMPPPLTVSSSSAPVSHSAPVPPS
SSTVSAASVQASLMPVSSLTMGLNSAGGVASMVPQMAAASSAAASASAVPSSASSRSTAA
SGKAPPNLPPGVPPLLPNPYIMAPGLLHAYPPQVYGYDDLQMLQTRIPLDYYSIPFATPT
TALTGRDGGLTSNPYSAGDLTKFARGDTSSPAPATTLAQAQQSQTQTHHTTQQPFLNPAL
PPGYSYTSLPYYTGVPGLPNTFQYGPAMFPVAATSSKQHGVNVGVNASATAFQQASGYGS
HGYSTGYEDLGQASAGSGDFCKGGYGNAVAAAAAAAAAAASAQNKPASSVTAPGVGVSVT
SSNTGVPDISGSVYTKTQSFEKQGYHAAAAPGASFSVPSALGSGGPINPPAAAPYAPAPF
MHILTPHQQPHSQMLHHHLQQDAQTGSGQRSQNASIQQKSQINKSTYNSYNWGGN
NT seq 3588 nt   +upstreamnt  +downstreamnt
atgatgacatcggtaggaggcaaccgaaaccgggctaactgggagcagacacagacacag
agccagtcacagcacaagcagaggcctcaggccaccgctgagcagatccgacttgcacag
atgatctcagaccacaatgatgctgactttgaggaaaaggtcaagcagctagttgacatc
actgggaaggaccaagatgagtctatgatagcgctgcacgactgtaatggagatgtgaac
agagcaatcaacgtgctactggagggcagccccgacaccgattcatgggaaatggtggga
aagaagaagggtgtgtcaggccagaaagaaaacgcacagacggacggcggagaagaaggg
aaggagaatcgcgagagaggaggcgagagggatgcagcacgtcgtagaggaggagctccc
aggagggggcgtggcaccagccgtggacgagagtttcatggtcaggagaacggcgtggac
gccaccaaggctggcggaatagcgggcagagggactgagcgcggccgccgaggacgaggc
agagggagaggtggtgctggtaggagaggaggaagattttcagctcaaggcatgggtacg
tttaacccggcagattatgctgagccagcacagactgaggagaactatgccatgggaagc
acctggagcaacactggcaacttggaaccagaagatggcgccagactcgatttttctgga
ggagacggaacaaattacccacgcaagttcgactccgctcccggagcatggagaactcct
acagaagagtggggtacggaggactggactgaggatttgtccgaaacgaagatcttcact
gcgtccagcgtggtgtccatgcccgtgcctcaagaaaatgttaccataacagctggacag
aggattgatttagcagtgctcctgggaaaaactccaccctcctcctcttctgagaaggag
tctgctccactagatgccgctcagccccaatctctctcccagtctctggtctttagcaac
tccaagcaatcggtctcgatccctcagccttcctccagcacctcatataatcagcacagc
atggtgagcatgctcagtaagggttttggtgaagttggagactctaaaggcaccagtgga
aactccaccagtggctctcaattcctggagcagtttaagaccgcacaggctctggctcag
ctggcagcgcagcattcgcagggcggcccatccagcacaggcccctccagctgggagtcc
agtcctgctccccttgcacagtatgacatgaagactcagacagatgcagcagggcacagt
ccctttaccaagcggcagccgtaccagcccacctcctcctctgcgtcctccatgatggat
gcttttctgcaggagaaaggtcccaccccctccactgcttcttctatgcccacccattcc
acttctttggcccaaacagtctctgctctgaaaccttcaggctctgcagttagccagcag
caaataccttcaggtccatcagagcctcaggcctccagtcctctgcccttacagcagcat
aaacttaagcatcaaaaaaagagaacctcgatcagcaccaagatccctgcattagcagtg
gagatgccaggttcagcagacatacccggaatcaacctgcagtttggagcgttacagttt
ggctccgagccggtgctgccggagtacgacaacacagcggtagccaccacaacaccaggc
agtgcgactcagaacagcctctacaccagtgccaacagtgaacaagctcctgctctgccc
agtgccattcagatggacctgtatgagcagagagcgagccagaccaggcgctacccgccc
tccgtttcctcgtctccacagaaagacttgcagcccaagaatgggttcagttcaataccg
acaacgcagtctttagaagctgcagccggctctgcagtgtctgtgaagacagcatctgac
tcgaacgttcctcccactgtgtccaacatggcctcgctttcggacccgccccaaggcccc
gcctctctcctgacaacatccagtcagacacagcttgcccctctgggacacgaagacccc
tcctctattacgattgctcctccacaacacaatgccctttccacaccacagaacagcatg
gcttcctccacagtgcgcacctccagcacaagcttattgcatccgaacatggatggagac
tcaagcctgcactcgtcttccttctcagtctctgcagtcgccccctccgccatgccccct
cccttaacagtttcttcctcctcagcccctgtctctcatagtgctcctgttcctccctca
tcttccacagtcagtgctgcctctgtccaagccagtctaatgccagtcagtagtctgact
atggggctgaacagtgccggtggagttgcctctatggtcccccaaatggctgctgcttca
tcagcagcggcctcggcttcagctgtgccatcatcagcttcatctcgcagcactgctgcc
tcagggaaagcgcccccgaatctgcctccaggagtgcctcctctcctgcccaatccttat
atcatggctcctggcctgctccacgcatacccgccccaggtgtatggctacgatgatctg
cagatgctccagacacgaataccactggattactacagcattccatttgctaccccaaca
acagcactcacaggaagagatggcggtttaaccagcaacccttattctgctggtgatctg
actaagtttgctcgtggggacacgtcgtctcctgctccagccaccacgctggctcaagcc
cagcagagtcagacccaaactcatcacaccacgcagcagcccttcctgaacccagctttg
ccccctggctacagctacaccagtctgccctattacactggcgttcccggtttgcccaac
acgttccagtatggccctgccatgtttccggtagcagctacttcctccaaacagcacggc
gtgaacgttggcgtcaacgcttcagccaccgctttccaacaggccagtggatatggatct
catggatacagcactggctatgaggatttgggccaggcttcagcagggagcggggatttc
tgtaagggcggctatggcaatgctgtggctgccgctgccgccgccgctgctgctgctgct
tctgctcaaaacaaaccggccagctcggtcaccgcgcccggagtgggagtctctgttacg
tccagcaacacgggtgtccctgacatttcagggtctgtttacacaaagacacagtccttt
gagaagcagggttatcacgcggcagcagcaccgggagcctcgttcagcgtgccctcagcg
ctgggaagcggcggccccatcaaccccccggctgcagcgccctatgccccggcgcccttc
atgcacatcctcactcctcatcagcagcctcactcacagatgctgcaccaccacctacag
caggacgctcagactggatccggacaacgaagtcagaatgcttccattcagcagaagtcc
cagatcaacaagtctacttacaacagctacaactggggaggcaattaa

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