Silurus meridionalis (southern catfish): 124381945
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Entry
124381945 CDS
T08004
Symbol
prrc2a
Name
(RefSeq) LOW QUALITY PROTEIN: protein PRRC2A
Organism
smeo
Silurus meridionalis (southern catfish)
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
BAT2_N
Motif
Other DBs
NCBI-GeneID:
124381945
NCBI-ProteinID:
XP_046699879
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All DBs
Position
29:8565243..8584528
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AA seq
1922 aa
AA seq
DB search
MSERSGQTAKGKDGKTKYASLNLFDTYKGKSLEVQKPVVAPRHGLQSLGKVASARRMPPP
ANLPSLKAENKGNDPNVSLVPKDGTGWASKPESADPKSTDVSSAPQPESQQPAASQTPAP
SLPRTPPAQEAPTTAIVAGTRSWAQASVTLGVQGDGGKGSNQPSPFSREEFPTLQAAGDQ
DKAGKEQATADQWYGPGPSLRPQNVTSWRDGGGRGMAPTIAGEGMVEGSLVAAMGMEGAA
GAPLLQNPPHGPPRNPPAGSPTLPLPQPPVGPQFAYRGILPPFMYPPFLPFPPPYGPQGP
YRFPTPNEAPRFSRSQGGPAPEGRPPGGPRGEMVKRPSILKQDDLKELDELDHEIDEGWA
GAQEEIDYSAKLKFSDDEGEEEGDDEEIEHNNGIMEQREQQKSQDGPALSSRSQASDSGS
STRHTPPVPTDEAAPGPSSKPNWAEEGGSSWGGQASAGPYQERRPGHGGPREQPSPPPIS
LLGQGPNSYYRQQERASNQSVPQKLSNNNNNQVQQPKGPTPPPALINQTQGEDEDETWRQ
RRKQSSSEISAAVERARRRREEEERRMEEERRAACAEKLKRLDEKQQQQQQQQQQQQQQQ
QQQQQQQQQQQQQQQQQQQQQQKPSAAVEVAATSPTPSLTTSVSSSSTSQPPSPCVDTEE
PPLASAQLGGATLALTANNRQRAGSNSSYDSNTDAQQVVPPPAPQHQQPHDVPAPGEVKE
EPVPSSTHVRSSRSGDETVKVETISGGSGRPGGGMPGQGFSKYQKSLPPRFQRQQQEQLL
KQQQQWQQQHSQAAQVQLQPQAPQQTPGATPQPGPKQPALFPGSMGRPPPLPINFDPRWM
MMPYMDPRIMQGRPPPMDYYPASMHPTGLMSRERSDSGGSGSEQFDRQQHGGPPHAHRGT
PPMDPKLAWGPEVFPGSGEGRALSSPLRQKQALEEEDMGKGARSDTPPVRNQDGGPGSIQ
PPLVGTNSPSGSTDKSISPVGTQVGHHQPFLGGRGNYSSFPDPGSRMVSHPQQRVNTAGE
VRGFGHHDEPPQSGQQNQIWGAPHPHFDRNGRADLAPLDNTHLQHHHAHPSHYTLHPHKQ
ENGRERGGEPKKTGSSPPLPQQCPSSSCSSTSSASSAREDGSGKQSLRHSPHQHEHDTGP
RGVGGRKHDKPGNTYSHLQSSQHSVQQHHPKSNSRSREQKTETHWGPRPGSSSASGGSVH
NRKGGHTGGEDLTHQVDKPIVQSGGGNPNKRMGPIKRPVLKEIKRELGEGEGGEKNSIGS
AKDKDQTASHVSVKQTSASGSQAPSGPSRKDESALPGKPRNGGKDRGAGGAMSKSSKEGE
NSVQTTGSLAPPSRRDREHSYETSSNAGGGTFHAGSSRGGRASRGRGEFYGRGRGYRGSY
AGSARGRAGGRSSRDYRATANSGYHHGSSNQDHKREGSSGRHGQGGPQPNPGRARNHSET
RSEGSEYEEVPKRRRQRGSETGSESAASDLAHSDREDRKAPTKKGTGGENQALGNATSSA
PPRNTQTRVFTPRGVPSRRGRGGGAAGGGVYRNSGGGGGMSGGHRSGPGSSSQGMSAKSS
ASARKQHPQPSLIKEASHGSNGEKKEKATEQGHSQNQGVNSSKSLPAVPTTAPMGTENGG
VAQNLSNINSNSSGPKPLPLPNVDGRNVLHRGFERPPRRRRHGRSQHQQDKPPRFRRLKQ
ERENAARINGSSGIIEAVGAQPQPSASPSQNPVQDGTSNVSSTAAVANANHNIAATNNSS
YLGGGNLNLNSHHHHHHHFHGNSGLPHSQHHHNHNQTGGAKSPDVSNHNSDQANEEWETA
SESSDFAEFREREGGGGGVGGGGGGKSYSSYHHHHPSGRGSGGGGAVDREITNKDSAANK
RSFSSQRPGMERQNRRVSTGGSGGGRGSRGPPNSGGPGGLSGNGGPNRGERRGNWSSPKN
RK
NT seq
5769 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagcgctctgggcaaacagcaaaggggaaggatggcaaaaccaagtatgcgtct
ctcaacctgtttgatacctacaaaggaaagagccttgaagtacagaagcctgttgttgcc
cctcgtcatggcttgcagtctcttggtaaagttgcctctgctcggcgtatgcccccccct
gccaacctgcccagtttgaaggcggagaacaaaggcaacgaccccaacgtctcgctcgtt
cccaaagacggcacaggatgggcaagcaagccagaatcagccgacccaaagagtaccgat
gtatcgtcagcaccgcagccggagtcgcagcagcctgcggcttcacagacacctgcgccg
agcctgccgagaactcctccagctcaagaggccccaactacagctatagtcgcagggaca
aggtcctgggctcaggccagtgttacacttggagtacaaggagatggtggaaagggatca
aaccaaccgtcgccattctctcgcgaggaatttcccaccctgcaggcggcgggcgaccag
gacaaagctggcaaagaacaggccactgcagatcagtggtatgggccaggaccaagcctc
cgcccccagaatgtgacgagttggcgggatggtgggggccgtggaatggcgcccaccata
gctggggaggggatggtggagggcagcctcgtggcagccatgggaatggagggtgcagct
ggggcccctctccttcagaatcccccccatgggccacctagaaacccgcctgcaggcagt
cccacccttcccctcccccagcctccggttggcccgcagttcgcttacagaggaatcctg
cctcccttcatgtacccaccgttcttgcccttcccaccgccatatggtccacaagggcct
tacaggtttcccacacccaatgaggcccctaggttctctcgttcacagggtgggcctgca
ccagaggggaggccacctggtggcccccgtggcgagatggtcaaacgcccctccatccta
aagcaggatgaccttaaggagctggatgagttagaccatgagatagatgaaggatgggct
ggggcacaagaggagattgactactcggccaagttaaagttcagcgacgatgaaggggag
gaagagggggatgacgaggaaatcgaacacaacaacggaattatggaacaaagggagcag
cagaaatcccaagacggacctgccctaagttcacgttcccaggcatctgatagtggaagc
agtacaaggcacacacctcctgtccccactgatgaggctgccccgggaccctccagcaag
ccaaactgggccgaggaggggggaagcagctggggtggtcaggcaagcgctggaccctac
caggagcgtaggcctggacacggtggtcctcgggagcagccctcccccccaccaatttca
cttcttgggcagggacccaactcctactaccgacagcaggaacgggcctcgaaccagtcc
gtgccccaaaagctgtctaataataataataatcaggtccagcagccgaaaggacctaca
cctcctccagccctgattaatcagacacagggtgaggatgaagatgaaacatggcgccag
cggagaaagcagtcatcttcggagatctctgcggcagtcgaacgtgctcggcgtcgccgc
gaggaagaggagcgtaggatggaggaagagcggcgtgctgcatgcgctgaaaagttgaag
cggctggatgagaagcagcagcagcagcaacagcagcagcagcagcagcagcagcagcag
caacaacaacagcagcagcagcaacaacaacagcagcagcagcagcaacaacaacagcag
caacagaagcccagtgctgccgtggaggttgctgcgaccagccccactccgtccttaacc
acttcagtttcttcatccagcaccagtcagcccccatcaccctgtgtagacacagaggaa
ccacctctcgcatctgctcagttaggtggcgctacactggcgctgactgctaataacaga
caaagagctggcagcaatagcagctatgactctaacactgatgcacaacaggttgttcca
cctcctgccccccagcatcagcagccccatgatgttccagcaccaggggaagtcaaggag
gaacccgtgccaagcagcactcatgttcgcagtagcagaagtggcgacgagacggtgaag
gtcgagacgatttcagggggatccggaaggccagggggtgggatgcctggccagggcttt
tccaagtatcagaagtcccttccgcctcgtttccagaggcagcagcaggaacagctcctg
aaacagcagcagcagtggcaacagcagcacagccaagctgcccaagttcagctccagcca
caagcacctcaacagactcctggcgccactccgcagccaggtcctaaacagcctgctcta
ttccctggctccatgggacggccgccaccactgcccattaactttgatcctcggtggatg
atgatgccctacatggaccctcgtataatgcagggtcgccccccaccaatggattactat
ccggccagcatgcatcccaccgggctgatgagtcgggagcgttcggattccggtggctct
ggctcggagcagtttgataggcagcagcatggaggtcccccccatgctcatcgtggtaca
ccaccaatggatcctaaactggcttggggaccagaggttttcccagggagcggagaagga
cgggctctgagttcccccttaaggcagaaacaagctctggaagaggaggacatgggcaaa
ggtgccaggagtgacactcctccggtgcgcaatcaagacggaggtccaggttccattcag
ccacctcttgtgggtacaaactctccttctggctctactgataaatcaatatcccctgtg
gggactcaagttggccatcaccaacccttcttgggagggcgtggcaattacagcagcttc
ccagatccaggatccaggatggtttctcacccacagcagagggttaatactgcaggagaa
gtccgtggctttggtcatcatgatgaaccaccacagagtggccaacagaatcaaatatgg
ggtgctccacatccccactttgaccgtaatggccgcgctgatctcgcgcccttggacaac
acccatttgcagcatcaccatgcccatccctcacattacactctgcatccacacaaacag
gagaacggtagagagaggggaggagagcccaagaagaccggatcctctcctccacttccc
cagcaatgcccttcttcttcctgctcttctacctcctccgcctcttcagccagggaggat
ggtagcgggaagcagtcactacgtcactccccacaccagcatgagcatgacactggacct
cgtggtgttggtggacggaaacatgacaaaccaggcaatacctactctcacttacagtcc
tcccagcattcggtgcagcagcaccaccccaaatctaactcccgtagtcgggagcaaaag
actgaaactcattggggcccaagacctggaagcagtagtgcaagtggtggatctgtgcat
aacagaaagggaggacacacaggaggggaggatttgacccatcaggttgataagcccatt
gtccagtcaggggggggtaaccccaacaagcgaatgggtcctattaagcgacctgtgctg
aaggaaataaaaagagaacttggtgaaggtgagggaggagagaagaacagcattggctct
gcaaaagataaagaccaaactgcctctcatgtgtcagttaaacaaacgtcagcctccggt
tctcaagccccatccggaccttccaggaaagatgaaagcgctctgccgggaaagccgaga
aacggtggcaaggatagaggtgctggtggggccatgagtaaatcatccaaagaaggagaa
aactctgtccaaaccactggttctttagctccaccttccaggagggacagagagcattct
tatgagacaagtagcaatgcaggaggtggtacattccacgcgggctcttccagaggaggc
cgagcgagccgtggaaggggcgagttctatggtcggggcagaggatacagaggcagttat
gcaggaagtgcacgtggtagggcaggaggccgaagcagccgagactacagagccactgcc
aacagcggatatcaccacggttcctctaaccaagatcacaagagggaagggtcatctggc
agacacggccagggaggcccccagccaaaccccggacgtgcccggaaccacagcgaaacc
cgaagcgaaggctctgagtatgaagaagtgccgaaaagaaggaggcaaagaggttccgag
acaggcagtgagagcgcggctagtgaccttgcacactctgacagggaggatcgtaaagca
cctactaagaaaggaacagggggagagaaccaagctttgggcaatgcaacatcttcagca
ccaccaagaaatacccaaaccagagtgttcacgccgagaggagtgccttcgagacgtggc
aggggtggaggtgccgctggaggaggtgtctacagaaattcaggtggtggaggaggcatg
tctggtggacaccgttctgggcctggttcttcttctcaaggtatgtctgctaaatcctct
gcatcagctcgaaagcaacatccacagccctccctaataaaagaagcaagccatggatct
aatggagaaaagaaagaaaaggctactgagcagggtcattctcaaaaccagggtgtaaac
tcttcaaaatctctgcctgcagtgcccacaactgccccgatgggcactgaaaacgggggt
gtggcccagaacctaagcaacatcaattccaattcctctggacccaaaccgcttccttta
cctaatgtagatgggcgaaatgtcctgcacaggggatttgagcggcctcctcggcgtcgg
cgccacggtcgctcccaacatcagcaagacaagccgcccagatttcgccggctcaaacag
gagcgggagaatgctgcccgtatcaacggaagcagtggaataatcgaagctgtaggcgca
cagccacagccgtctgcttcgccatcccagaatccggtgcaagacggaacgtctaacgta
tccagtaccgccgccgttgcaaatgcgaatcacaatatcgccgcaaccaacaatagcagc
tatcttgggggtggaaacctgaatttgaatagccaccaccatcaccatcatcatttccat
ggcaactctggcctgccccattctcagcaccaccataaccacaaccagacgggtggcgcc
aaatctccagatgtctccaaccataactctgatcaggccaacgaggaatgggaaactgcc
tctgaaagcagtgactttgcagagtttcgagagagggaaggtggtggtggtggagttggt
ggaggaggaggtggaaaatcctattcctcttaccaccaccaccatccttctggaagagga
agcggaggtgggggagctgttgaccgagagatcactaataaagattcggctgccaataag
aggagcttctccagccagcggcctgggatggaaaggcagaatcgacgggtcagcaccgga
ggcagtggaggtggtcgaggttccaggggtccacctaacagtggaggaccgggtggttta
tcgggtaatggcgggcccaatcgtggtgagaggcgtggcaactggtcatctcccaagaac
aggaagtga
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