Silurus meridionalis (southern catfish): 124382060
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Entry
124382060 CDS
T08004
Symbol
vamp1a
Name
(RefSeq) vesicle associated membrane protein 1a
KO
K13504
vesicle-associated membrane protein 2
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
124382060 (vamp1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124382060 (vamp1a)
Membrane trafficking [BR:
smeo04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
VAMP
124382060 (vamp1a)
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
124382060 (vamp1a)
BRITE hierarchy
SSDB
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Paralog
GFIT
Motif
Pfam:
Synaptobrevin
MCU
DUF4736
RHA1_ro05818_N
Ureide_permease
CcmD_alt
DDB_G0292058_C
RNF152_C
Motif
Other DBs
NCBI-GeneID:
124382060
NCBI-ProteinID:
XP_046700110
LinkDB
All DBs
Position
29:complement(6614668..6620670)
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AA seq
120 aa
AA seq
DB search
MSAPYQDAATDPGAPDGVEGTAAPAQDPNLSSNRRLQQTQAQVDEVVDIFRENVEKVLHR
DQQLSEMDQRAEALHDGAQQFESSAAKLKNKYWWKNCKMMIIVGVIVVLLLGIAFMYFYH
NT seq
363 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctccatatcaggatgccgccactgacccaggagccccagacggggttgaagga
acagcagccccagcccaagacccaaacctctctagcaatcgtcggctgcagcagacacaa
gctcaagtggatgaggtggtggacatttttcgggaaaacgttgaaaaggtgctacacagg
gaccagcagctgtcagagatggaccaacgggctgaagcactgcacgatggggctcagcag
tttgagagcagtgctgccaagctaaagaacaagtactggtggaaaaactgcaagatgatg
atcatcgttggagttattgttgtcctcctactgggcattgctttcatgtacttctaccac
tga
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