Silurus meridionalis (southern catfish): 124382061
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Entry
124382061 CDS
T08004
Symbol
rhbdl3
Name
(RefSeq) rhomboid-related protein 3 isoform X1
KO
K02857
rhomboid-related protein 1/2/3 [EC:
3.4.21.105
]
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
smeo01002
]
124382061 (rhbdl3)
Enzymes [BR:
smeo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
124382061 (rhbdl3)
Peptidases and inhibitors [BR:
smeo01002
]
Serine peptidases
Family S54: Rhomboid family
124382061 (rhbdl3)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhomboid
EF-hand_7
EF-hand_6
EF-hand_1
DUF5580_M
AIF-1
EF-hand_11
EF-hand_9
Motif
Other DBs
NCBI-GeneID:
124382061
NCBI-ProteinID:
XP_046700150
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All DBs
Position
1:687867..708325
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AA seq
413 aa
AA seq
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MSTGARGASSSSSPSPAVASRAEGEEIEVLESGETEHEPGAPPTDTQWKSLFDKYDPEGS
GFISAEHLRDLLETHGSELDTHKLEVLLALANGNAEGKIRYQDFINLMSNKRSNSFRRAI
QQGGRQLKSSSLREEVGLGLPQRLVRHVAYETLPREVDRKWYYDSYTYCPPPWLFITITI
TEMVVFVYYGLLLDRWVLQVSSPFFLKSPLPYHPQRRAQAWRFLSYVFMHAGIEHLSLNM
AMQLLVGVPLEMVHGAFRIGLIYICGVLAGSLVVSVVDMAAPVVGSSGGVYALVSAHLAN
IVMNWSGMKCQFKLFRMAMALVCMSVEFGRAVWLRFYPPAMPPCPNPSFCAHLGGVAVGL
TLGVVVLQNYEQRLHEQFLFWIFISVYGLFVLFGIFWNIFAYSLLDVKLPPAP
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccggcgcgcgcggcgcgtcctcgtcctcgtccccgtccccggcggtggcgtct
cgcgcggagggcgaggagatcgaagtgctggagagcggagagaccgagcacgagcccgga
gctcctcctacagacacacagtggaaatctctgtttgacaagtatgacccagagggttca
ggattcatcagcgctgaacatttgcgtgatctgctcgagacacacggctcagaactcgac
acacacaagctggaggttctgctggcgcttgccaatggaaacgctgagggaaagatccgc
tatcaggatttcattaatctgatgagtaataaacgctcgaacagtttccggagagcgatc
cagcagggagggaggcagctgaagagctctagtctgagggaggaggtgggactcggtctg
cctcagagactcgtccgacatgtggcctacgagacgctgcctcgagaagtcgaccgcaag
tggtactacgacagctacacctactgtcctccaccctggctcttcatcactatcaccatc
actgagatggtggtgtttgtgtattatggtctcctgctggaccgctgggttctgcaggtt
tcttctccttttttcctgaagagtcctctgccctaccaccctcagcgcagagctcaggcc
tggcgctttctcagctacgtcttcatgcatgctggaatcgagcaccttagtctgaacatg
gccatgcaactgttggttggtgttcctttagaaatggtacacggagctttcaggattggc
ctcatctacatctgcggcgttctagcaggttctttagtggtttctgtggtagatatggct
gctcctgtagtcggttcatcaggaggagtttatgccctcgtctccgcccacctggccaac
attgtgatgaactggtcagggatgaagtgtcagtttaagttgttccggatggccatggcg
ctcgtctgcatgagcgtggagttcggccgtgccgtgtggctgaggttttacccccccgct
atgcccccgtgccccaaccccagtttctgtgcccacctgggtggggtggcggtgggcctg
acgctgggcgtggtcgtgttgcagaactatgagcagcggctgcacgagcagttcctcttc
tggatcttcatcagcgtctatggcctctttgtcctcttcgggatcttttggaacatcttt
gcttacagcctgctggatgtcaaactcccacctgcaccatga
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