Silurus meridionalis (southern catfish): 124382106
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Entry
124382106 CDS
T08004
Symbol
erf
Name
(RefSeq) LOW QUALITY PROTEIN: ETS domain-containing transcription factor ERF
KO
K09434
ETS domain-containing transcription factor ERF
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeo03000
]
124382106 (erf)
Transcription factors [BR:
smeo03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Ets-type
124382106 (erf)
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Gene cluster
GFIT
Motif
Pfam:
Ets
HSF_DNA-bind
Motif
Other DBs
NCBI-GeneID:
124382106
NCBI-ProteinID:
XP_046700171
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Position
29:5399091..5422130
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AA seq
613 aa
AA seq
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MKTPGDSGFAFPEWAYKPESSPGSRQIQLWHFILELLRKEEYHDVIAWQGDYGEFVIKDP
DEVARLWGARKCKPQMNYDKLSRALRYYYNKRILHKTKGKRFTYKFNFNKLVLVNYPFID
MGSAGSNVPQSAPPVPSGVGTHFRFPPSTPSDVLSPNGEELRSPGVFASVARRAARGSVS
DCSDGTSVASELEEVGMTGGDERPAERAFRSLFLPHHPRLTHDSLFRMYGVPPPAPVPFP
ASPLPGGPLLPPQLSPALSMTSTPTSHLPYTPSPSLASPMPGSRFSFNPEDMKRYLQAHA
QSVYNYHLSPRAFPHYPSIVVPQPQRLDKGLAGPAAGSHFSTHPLHHQQPEEPHASTFKF
KLQPPPLGRKHRDAPQSSATGHVSSVSASTVLFVGECGSAAVQGTNSAPSGLTNSSSGGP
PKIKVELVSDIESEEEVEVTDISEDDDNCDVFAPSHYNGGPSILPCPDTLIDEGDDLEED
VFKTPAAPPSGAISGIAIGVGMALPGLKAEPREGSPSSPGGSQCIPLKLRFKRRWSEDQR
MEAXSEEAEDKKSRAEKDEPLSREREPQPHKVLPHNEGRSLVNLAASLSAGQRRVSSELQ
KATAQLSLENNGC
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgaagaccccaggagactcggggttcgcctttccggaatgggcgtacaagccagagtca
agcccaggctccagacagatccagctctggcatttcattctggagctgctcaggaaggag
gagtaccatgatgtcatcgcctggcagggggattacggagagtttgtcatcaaggacccg
gacgaggtggctcgactgtggggagcccgcaagtgcaaacctcagatgaactacgacaaa
cttagtcgagctctcagatactactacaataagcggattctgcacaagacaaaagggaaa
aggttcacctacaagtttaacttcaacaagcttgtgctagtcaactacccgtttattgac
atggggtctgcaggttccaatgtgccccagagtgctcctcctgtcccgtcaggtgttgga
acccactttcgtttccctccttctactccatctgatgtcctctccccgaatggtgaagag
ctgcgcagtccaggtgtgtttgccagtgtggcacgacgggcagcacgggggtctgtatcc
gactgcagcgatggcacttctgtagcctcggaactggaggaggtgggcatgacaggtggt
gacgaacgcccagcagagcgagccttcagatctctgttcctgccacaccatccacggctc
actcacgactctttgtttcgcatgtacggtgttcctccacccgccccggtacccttccct
gcctcacctctgcctggtggccctctgctacccccccagctctcacctgcactctccatg
acttcaacaccaacctcacacctgccctacaccccctcaccctcactggcttcacccatg
cccggctcacgcttctccttcaacccggaagacatgaagcgctacctgcaagcacatgca
caaagcgtctacaactaccacctcagtccccgcgccttcccacactaccccagcattgtt
gtgccccagccacagcgtcttgataagggcttggcaggaccagcagcaggatcacacttc
agcacccacccactgcaccaccagcagcctgaagagccacacgcctcaacctttaaattt
aagcttcagcctccacctctgggccggaagcaccgggacgcaccacaatcttcagcaacg
gggcacgtttcctctgtttctgcctcaacagtcttgtttgtgggtgaatgtggctctgct
gcggtgcagggtaccaattctgcaccttctggactgactaacagcagttctggaggtcct
ccaaagatcaaggttgagcttgtctcagatatagaatcagaggaagaagtagaggtcact
gatataagcgaagatgatgataactgtgatgtgtttgccccgtcacactataatggagga
ccttccattctgccctgccctgataccctcatagacgagggggatgatcttgaggaagac
gtctttaagaccccagcagcacccccttctggtgcaatcagtggcattgccattggggtt
ggcatggctttgccaggcctgaaagctgaacccagggagggaagtcccagcagccctggc
ggctcccagtgcataccactgaaactacgtttcaagcgccgctggagcgaggaccagcga
atggaggcanggagcgaagaggcggaagacaaaaagagtcgtgccgaaaaggacgaaccc
ttgtccagagagagagaaccacaacctcacaaggtgctgccacacaatgaggggaggagc
ctggtcaacctggctgcatctctgagtgcaggtcagcgaagagtcagctctgagcttcaa
aaagcgacagcgcaactgtctttagaaaacaacgggtgctga
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