Silurus meridionalis (southern catfish): 124382137
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Entry
124382137 CDS
T08004
Symbol
lrp12
Name
(RefSeq) low-density lipoprotein receptor-related protein 12
KO
K20050
low-density lipoprotein receptor-related protein 3/10/12
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124382137 (lrp12)
Membrane trafficking [BR:
smeo04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
124382137 (lrp12)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUB
Ldl_recept_a
Motif
Other DBs
NCBI-GeneID:
124382137
NCBI-ProteinID:
XP_046700217
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Position
29:11108290..11114781
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AA seq
818 aa
AA seq
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MACAWGMKKVSLWTNSLFILSMVFLNEAFSSQRGDNVYVSGISNACGDVVEQIRASSGVI
TSPGWPFEYPSRINCSWNIRANPGEIITISFQDFEIQSSHRCGMDWISIGTYKNLDGYRA
CGSSIPAPYISSQDHVWIKFHSDDTLTGKGFKLSYITGKSEEASCEADQFHCVNGKCIPQ
SWRCNTMDECGDNSDEELCVHPNPPSSSSSSFFSFQPCLFDQFPCVSRYTRVLTCLPSSL
RCDGAIDCQDLSDEIDCDVPACSELRLQNFYGTFNSPNYPDFYPPGSDCTWLIDTGDHRR
VVLRFLDFKLDGTGYYGDFVKVYDGLEAEPRRLLRVLTTLDSRTSVITIISSSGQLRVHF
YADKINTARGFNATYQVEGFCLPWEMPCGGNWGCYTEQQRCDGYWHCANGRDELNCSGCG
EDEFPCSRNGACYPRSDRCNYQNRCPNGSDEKNCAFCQPGNFHCRNGRCVFESWVCDAQD
DCGDASDEDACPVAVPTRVIAAAVIGSLVCGLLLVIALGCTCKLYSLRSFERRSFETQLS
RVEAELLRREAPPSYGQLIAQGLIPPVEDFPVCSGNQASVLENLRLAVRSQLGFTSIRLP
SSGRHGNVWRRLFNFTRSRHSASLALVSSGAGVESDSGSGVHGVGSSAHISERLDSDDSE
SEQQGAVGGASASLLPHKTPPAATIVSVSASTAPHAVPESDDIVVPPPSGRGSLVARGLR
WVRMSFGSRFAQQNRSPLRQMQNGTASEEDDDEDVELLVPLTDTSDAPSTAPSLRGRPAI
RDGPCENCGMVHTAQIPDACLEATTRTETSDDDSLLLC
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atggcctgtgcttggggcatgaagaaggtctcattatggactaattcacttttcatcctc
agcatggtcttcctcaacgaagcgttctcctcacagcgcggtgataacgtctacgtgtcc
gggatctccaacgcctgtggagatgtggtggagcagatcagggcctccagcggtgtgatc
accagtcctggatggccttttgagtatccgtctcgcatcaactgcagctggaacatccga
gcaaatcctggagaaataattaccattagttttcaggactttgagatccagagctcgcac
cgctgcggtatggactggatctccatcggcacctacaagaacctggatggttaccgagcg
tgcggttcttccatcccggctccctacatctcctctcaggaccacgtgtggatcaaattc
cactcggacgacacgcttaccggcaagggcttcaagctctcgtacatcacaggaaagtcg
gaggaggcgagctgcgaggcggatcagttccactgcgtgaacgggaagtgcatcccccag
tcgtggaggtgcaacacgatggacgagtgcggagacaactccgacgaggagctctgcgtt
catcccaaccctccttcttcctcttcttcttctttcttctcctttcagccgtgcttgttc
gatcagttcccatgcgtctcgcgctacacccgagtcctcacctgccttccgtcttctctc
cgctgtgacggcgccatcgattgccaggacctgagcgacgaaatcgactgcgacgttccc
gcctgctcagagctccgccttcaaaacttttacgggacttttaactctccaaattacccg
gatttctacccccccggaagcgactgcacgtggctgatcgacaccggcgatcaccgcaga
gtcgtcctgcgcttcctggatttcaaattagacggaaccggttactatggagattttgta
aaagtgtacgacggcttggaggcggagcctaggcgcctcctccgcgttctgaccaccctg
gattcgcgcacttcggtcataacgatcatttcgtcgtcggggcagctgcgtgtgcacttt
tacgcagataagatcaacactgcgcgaggattcaacgctacctatcaggtcgaagggttt
tgcttgccctgggagatgccgtgcggaggaaactgggggtgttacaccgaacagcagcgc
tgcgacgggtactggcactgtgctaacggcagagacgagctgaactgcagcggatgcggt
gaagacgagttcccctgttccagaaatggcgcgtgttacccgcgatccgaccgctgcaac
tatcagaaccgctgccccaacggctccgacgagaagaactgcgctttctgccagccgggg
aacttccactgcaggaacggccgctgcgtgttcgagagctgggtgtgtgacgcgcaggac
gactgcggggacgccagcgacgaggacgcctgccctgtcgccgtgccaacacgggtcatc
gccgccgcagttatcgggagcctggtgtgtggcctgctgctcgtcatcgcgctcggctgc
acctgcaaactctactctctcaggagcttcgagcgcaggtcgtttgagacccagttgtcc
agagtggaggcggagttactgaggagagaagctccgccctcatatggccagcttatcgct
cagggattaatcccccctgtggaggattttcctgtctgttctggcaaccaggcttccgtg
ttggagaatctccggctggctgttcgctctcagctcggcttcacctccatccgcctcccc
tcctccggtcgccacggaaacgtctggcgccggcttttcaatttcacgcgttctcgccac
tccgcctcattagcgctggtgtcctccggtgcaggggtggagtcggactcgggaagcggg
gttcacggcgtcggaagctccgcccacatttcagagcgactggattctgacgattcagaa
agcgagcagcagggggcggtgggcggcgcgtcggcttctcttctgcctcacaaaacccct
ccggccgccaccattgtttccgtttccgcgagcaccgccccgcacgccgtccccgagagc
gacgacatagtggttccgcctcccagcgggcggggctcgttagtggcgcgtgggctgcgc
tgggtccggatgtccttcggatctcgattcgcacagcagaaccgaagcccgctgaggcag
atgcagaacggaacagcgagcgaagaagatgacgatgaagacgtcgagctcctcgttcct
ttaaccgacacctccgacgcgccttccaccgctccctcgctccgtggcaggccggcgatt
cgggacgggccctgcgagaactgcgggatggtccacacggctcagattcccgacgcatgc
ttagaggcaacgactagaacagaaaccagcgacgacgattctcttttgctttgttaa
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