Silurus meridionalis (southern catfish): 124382163
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Entry
124382163 CDS
T08004
Symbol
cacng6a
Name
(RefSeq) calcium channel, voltage-dependent, gamma subunit 6a isoform X1
KO
K04871
voltage-dependent calcium channel gamma-6
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04010
MAPK signaling pathway
smeo04260
Cardiac muscle contraction
smeo04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
124382163 (cacng6a)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
124382163 (cacng6a)
04261 Adrenergic signaling in cardiomyocytes
124382163 (cacng6a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
smeo04040
]
124382163 (cacng6a)
Ion channels [BR:
smeo04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
124382163 (cacng6a)
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Motif
Pfam:
Claudin_2
PMP22_Claudin
Motif
Other DBs
NCBI-GeneID:
124382163
NCBI-ProteinID:
XP_046700264
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Position
29:6178541..6183008
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AA seq
270 aa
AA seq
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MWSTFVVQDEEARSTAISGRGTEALSGMIAVRTGGGGKRRTRAPTASLSEHQGGKIKLAL
FVAAVGITLTVLGVGTEFWVELASSKNFYNNETCLSAHYGLWKSCMKRLWVADVDPERET
CGPIDLPGESNCTYFKIYTTGENTVLFHKMPAKNLTVISAMLAILSLFLMGTGAVCIVMA
LSKGEQFFLKPASVCFTLSGLLVFLSLIVFRQSVLSFLESDHTIPLHHELSWSVACMGCA
GILLIIAGVLFLFLALPYSIWEKCLPKREH
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgtggtccaccttcgtcgtgcaggacgaggaggccaggtccacagccatatctggtaga
ggtactgaagcactatcaggaatgatagctgtgcgaaccggaggtggaggcaagaggcgg
acaagagcacccacagcttccctaagtgagcatcagggaggcaagatcaagctagcgctc
tttgtggctgcagtgggcatcacgctgactgttcttggggtgggcacagagttctgggtg
gagctggcctcatcaaaaaacttttataacaatgagacatgcctgtctgcacactatggc
ttgtggaagagctgtatgaaaaggctctgggtcgcggatgtcgaccctgagagggaaacc
tgtgggcctatcgacctacctggagaatcaaactgcacctatttcaagatatatacaact
ggagaaaacacagtcctgtttcacaaaatgccagcaaagaatttgactgtaatctctgcc
atgttggctatcttaagtctttttctgatggggacgggagctgtttgcattgtcatggca
ttaagcaaaggcgagcagttcttcctgaagccagcgtccgtctgtttcacattatcaggt
ctcctggttttcctgtctctcattgtttttcgtcagtcagtcctttcatttttggaaagt
gaccacaccataccattgcaccatgaactgtcatggtcagtagcatgtatgggatgtgct
ggcatcttattaatcattgcaggggttttattcctgtttcttgcactaccatacagcatt
tgggaaaaatgtctgcctaagagggaacactga
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