KEGG   Silurus meridionalis (southern catfish): 124382249
Entry
124382249         CDS       T08004                                 
Symbol
rpa3
Name
(RefSeq) replication protein A 14 kDa subunit
  KO
K10740  replication factor A3
Organism
smeo  Silurus meridionalis (southern catfish)
Pathway
smeo03030  DNA replication
smeo03420  Nucleotide excision repair
smeo03430  Mismatch repair
smeo03440  Homologous recombination
smeo03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:smeo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    124382249 (rpa3)
   03420 Nucleotide excision repair
    124382249 (rpa3)
   03430 Mismatch repair
    124382249 (rpa3)
   03440 Homologous recombination
    124382249 (rpa3)
   03460 Fanconi anemia pathway
    124382249 (rpa3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:smeo03032]
    124382249 (rpa3)
   03400 DNA repair and recombination proteins [BR:smeo03400]
    124382249 (rpa3)
DNA replication proteins [BR:smeo03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    124382249 (rpa3)
DNA repair and recombination proteins [BR:smeo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     124382249 (rpa3)
   MMR (mismatch excision repair)
     124382249 (rpa3)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     124382249 (rpa3)
SSDB
Motif
Pfam: Rep_fac-A_3
Other DBs
NCBI-GeneID: 124382249
NCBI-ProteinID: XP_046700401
LinkDB
Position
29:complement(9167862..9170545)
AA seq 117 aa
MSGVYEASKPRINASMLPQFASRPVCFIGRVEKVHPTGKSFTLTDGEGKNASVELNDPLE
EELSGIVEVLGMVSNKGTIMAAAYHVFREEKGISFDLELYNEALKVINDFPQFYPFK
NT seq 354 nt   +upstreamnt  +downstreamnt
atgtcgggtgtatacgaggcttcgaaacccaggattaacgcgtcgatgctcccacagttc
gccagcaggccggtgtgctttatagggcgcgtggagaaggtgcatccgacaggcaaatcg
ttcacgttgacggacggcgagggaaagaacgcgtccgtggagcttaacgatccgctggag
gaagagttgagtggaatagtggaagttctcggaatggtgtcgaacaaaggaaccatcatg
gctgcagcgtaccacgtgttcagggaggagaaaggaatttcattcgatttggagctgtac
aacgaggccctgaaagtcattaacgatttcccgcaattttaccccttcaagtaa

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