Silurus meridionalis (southern catfish): 124382449
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Entry
124382449 CDS
T08004
Symbol
appb
Name
(RefSeq) amyloid beta (A4) precursor protein b isoform X1
KO
K04520
amyloid beta A4 protein
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
smeo01002
]
124382449 (appb)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
smeo00535
]
124382449 (appb)
00536 Glycosaminoglycan binding proteins [BR:
smeo00536
]
124382449 (appb)
Peptidases and inhibitors [BR:
smeo01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
124382449 (appb)
Proteoglycans [BR:
smeo00535
]
Cell surface proteoglycans
Others
124382449 (appb)
Glycosaminoglycan binding proteins [BR:
smeo00536
]
Heparan sulfate / Heparin
Others
124382449 (appb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
APP_E2
APP_N
APP_Cu_bd
APP_amyloid
Beta-APP
Kunitz_BPTI
HTH_Tnp_Mu_1
DUF3792
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
124382449
NCBI-ProteinID:
XP_046700506
LinkDB
All DBs
Position
3:15374502..15390127
Genome browser
AA seq
757 aa
AA seq
DB search
MGKSTAFALLIAATLSLAVEVPSDDSVGLLAEPQVAMFCGKLNMHINVQSGKWESDPSGT
KSCIGTKEGILQYCQEVYPELQITNVVEANQPVSIQNWCKKGKRQCRSNGHIVVPYRCLV
GEFVSDALLVPDKCKFLHQERMDMCESHLHWHTVAKESCGDRSMNLHDFGMLLPCGIDRF
RGVEFVCCPMEEQRDSEAEEQEEANSDVWWGAAENEYTDSMTKQAPTAEQQELESANVDE
EDDIGDDVEEAWENDEDGDGVEDDEEDDEDEDSMNDHDSTEQASNVAMTTTTTTTTESIE
EVVRAVCWAPARKGPCRAKLSRWYFVAKTGRCAPFTFGGCGGNRNNFESEEYCMAVCSSS
VLPTMAPSPPDAVGRYLEAPGDINEHAHFQKAKERLEAKHRERMSQVMREWEEAERQVKS
LPRADKKAVIQHFQEKVEALEQEAANERQQLVETHIARVEALLNDRRRMALDSFLTALQA
DEPRPRQVFSLFKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRPQVLAHLRVIEERLN
ESVAYLYKVPQVSSEIQSQVALLLVRVQAETTQQLSSLQSDMRVSYGNDALMPPDSTPSV
DSVAVEQDNLGFIHPESFNQANTDNHVEPVDARPAPDRGLPTRPVSGLKPEEMPEVRMNT
EERHSTGYDVHHQRLVFFADDVSSNKGAIIGLMVGGVVIATIIVITLIMLRKKQYSSIHH
GVIEVDAAVTPEERHLSKMQQNGYENPTYKFFEQMQN
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaagcacggcctttgcgctcctgatagcggcgactttgtcgctcgctgtcgag
gtgccatcagacgactcggtgggattgcttgctgagcctcaggtggccatgttctgtggg
aaactcaacatgcatatcaacgtccagagtggcaagtgggagtctgatccttctggtacc
aagagctgtatcggaaccaaggaaggaattctacagtactgccaggaggtgtatcctgaa
ctgcagatcactaatgttgtggaggccaaccagccagtcagcatccagaactggtgtaag
aagggcaaacgtcagtgccgcagcaatggacacattgtagttccctaccgctgcctggtg
ggtgagtttgtgagcgatgcccttctggttcctgataagtgcaagttcctacaccaggag
cgaatggatatgtgtgaaagccacctgcattggcacactgtggccaaagagtcatgcggt
gaccgatcaatgaatttgcatgactttggaatgctgttgccatgcggtattgaccgtttc
cgtggtgtggagtttgtgtgctgcccaatggaggagcagagagactctgaggctgaagag
caggaggaagccaactcagacgtctggtggggagccgctgagaatgaatacacagacagc
atgaccaaacaagctcctacagcagaacagcaggaactggagtctgctaatgtggatgaa
gaagatgacattggagacgatgttgaagaggcctgggagaatgatgaagatggtgatggt
gtggaagacgatgaggaagatgatgaggatgaggattctatgaatgaccatgactccact
gagcaagcttcaaatgttgctatgaccactaccactacaacgaccactgagtctatagaa
gaagttgtacgagccgtgtgctgggctccagctcgaaaaggcccgtgtcgtgccaagttg
tcccgttggtactttgtggccaagacaggacgctgtgctccgttcaccttcgggggctgc
ggtggcaaccgcaataactttgaatcagaggagtactgcatggctgtgtgcagcagcagc
gtgttacccactatggctccaagcccccctgatgctgtgggccgctacctagaggctcct
ggagatattaacgaacatgcccacttccaaaaggctaaagagcgtctggaggccaaacac
cgtgaaaggatgtcccaggtaatgagggagtgggaggaggcagagaggcaggttaagagc
cttccccgtgctgataaaaaggctgtcattcagcatttccaggagaaggttgaagcatta
gagcaggaggctgccaatgagaggcagcaactggtagaaactcacattgctcgagtggag
gctctgcttaacgatcggcgacgtatggcactagacagcttcctaactgcactacaggct
gacgagccccggcctcgacaggtgtttagcttgtttaaaaagtatgtgcgtgccgagcag
aaggacagacagcacacgcttaaacattttgagcatgtacgcatggtggaccccaagaaa
gcagcccagatccgccctcaggtattagctcacctgcgtgtcattgaggagcgcctgaat
gaaagtgtggcatacctctacaaggtcccgcaagtgtccagtgaaatccagagccaagtg
gcattgcttctggtgcgtgtgcaggccgagaccactcagcagctctcctctcttcagtct
gatatgagagtcagttacggcaatgacgctttgatgccccctgacagcaccccatctgtt
gactccgtggccgtagaacaggacaacctgggctttatccaccccgagagcttcaaccaa
gcaaacactgataatcatgttgaacctgtagatgcccgtccagctcctgataggggactt
cccacacgacccgtgtctggcctaaagccagaagagatgccagaagtgcggatgaacact
gaagagaggcacagcactggctatgatgtacatcaccagagattggtattctttgcagac
gatgtaagctctaataagggagccataataggcctaatggtaggaggagttgtcatcgct
accatcatcgtaatcaccctcataatgctgaggaagaagcagtactcctccatccaccat
ggagtcatagaggttgatgccgcagtgactccagaagaacgccacctcagtaagatgcag
cagaatggctatgagaaccccacctacaagttctttgagcagatgcagaactaa
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