Silurus meridionalis (southern catfish): 124382469
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Entry
124382469 CDS
T08004
Symbol
gabpa
Name
(RefSeq) GA-binding protein alpha chain
KO
K09441
GA-binding protein transcription factor, alpha
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeo03000
]
124382469 (gabpa)
Transcription factors [BR:
smeo03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Ets-type
124382469 (gabpa)
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Gene cluster
GFIT
Motif
Pfam:
Ets
GABP-alpha
SAM_PNT
ubiquitin
Motif
Other DBs
NCBI-GeneID:
124382469
NCBI-ProteinID:
XP_046700518
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Position
3:complement(15390198..15396457)
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AA seq
450 aa
AA seq
DB search
MSKSEAEEMIEIEIDGQEKQECLEEGIEEQTITASDLITQDIDINEPVGNLKKLLEPRVQ
IALDGYDICLQDIHLHPDHSLFDQGVKTDGTVQLSLQIITKPGEEKLNILEIVKPVETVE
VVIDPDAATGEEAHLVEDGQVIAVERAAIADETSEQVTRWAAALEGYRKEQVRLSIPYDP
VQWTADQVIHWAVWVMKEFNIEEIEVGGIHIPGRQLCAFSQEEFLQRVPNGEILWSHLEL
LRKYVLASQEQGQEATVTIDQPVQIIPAPVQQATPTTIKVQKHNKVPRAPRISGEERSSP
GNRTGNNGQIQLWQFLLELLTDKDARDCISWVGEEGEFKLNQPELVAQKWGQRKNKPTMN
YEKLSRALRYYYDGDMISKVQGKRFVYKFVCDLRTLIGYSAAELNSLVTECEQKKLARVQ
LHGINTVALTTPAGQPVTTVALATTLEKDS
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaagtgaggctgaggagatgatcgagattgagatcgatggacaagagaaacaa
gaatgcttagaagaagggatagaggagcagaccattacagccagcgatctcatcactcag
gacatagatatcaacgagccagtcggtaacttgaagaagttgctggagcctcgtgtacag
attgctctggatggatatgatatttgtctgcaggacattcatctgcaccctgaccacagc
ctttttgatcagggtgtaaagactgatggcacagtacagctcagtttgcagattatcaca
aaaccaggtgaagagaagttgaatatcttagagatagtgaagccagtagagacagtggag
gtagtgatagatcctgacgcggccacaggagaggaggctcacttggtggaggatgggcag
gtgatagcagtcgagcgagcagccattgcagatgagacctctgaacaggtgacccgatgg
gcagccgcacttgaaggctaccgcaaggagcaggttcgacttagtattccttatgatccg
gtgcagtggacagcagatcaggtgatccactgggcagtgtgggtgatgaaggagttcaac
atcgaggagattgaggtgggaggcatccacatcccgggtcggcaactgtgcgccttcagc
caagaggagtttctccaaagagtgcctaatggagaaatcctgtggagccacctggagctg
ctacgtaaatatgttttggcgagtcaggagcagggacaggaagcgacagtcactattgat
cagcctgttcagatcatccctgcacctgtacaacaggccacacccacaaccattaaggtg
cagaagcataacaaagttcccagagcaccacgcatctctggagaggaacgcagttcccct
ggcaaccgtacaggtaataatgggcaaattcagttatggcagttcctgctggagctgctg
acagacaaggatgccagggactgcatttcctgggtcggggaggagggagagttcaaactc
aaccagccagagctagtggctcagaaatggggtcagaggaagaacaaacccacaatgaac
tatgagaagctcagccgagccctcagatactactatgatggtgacatgatcagcaaagtg
cagggcaagcgcttcgtctacaaatttgtttgcgacctgagaactctgattggctacagc
gccgctgaacttaacagcttggtgacggagtgcgagcagaaaaaactggcacgggtgcag
ctgcatggcatcaacaccgtcgccctgacaacgcccgcaggtcagccagtcaccaccgtc
gcactggccaccacattggagaaggacagctga
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