Silurus meridionalis (southern catfish): 124382612
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Entry
124382612 CDS
T08004
Symbol
tspearb
Name
(RefSeq) thrombospondin-type laminin G domain and EAR repeat-containing protein isoform X1
KO
K24437
thrombospondin-type laminin G domain and EAR repeat-containing protein
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
smeo03037
]
124382612 (tspearb)
04990 Domain-containing proteins not elsewhere classified [BR:
smeo04990
]
124382612 (tspearb)
Cilium and associated proteins [BR:
smeo03037
]
Other cilia and associated proteins
Stereociliary proteins
124382612 (tspearb)
Domain-containing proteins not elsewhere classified [BR:
smeo04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
124382612 (tspearb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EPTP
Laminin_G_2
Laminin_G_1
Motif
Other DBs
NCBI-GeneID:
124382612
NCBI-ProteinID:
XP_046700565
LinkDB
All DBs
Position
Unknown
AA seq
672 aa
AA seq
DB search
MLLKLFISFCCFISSWSSPWRPCTGTLPHLEQHLLPLDLLHRVLPVGSHQTLVRMVQSQG
SRGLKLSGPPQALSFPSSQIFTNCNFFPAEFSIVVTLKIPKLNPTKDEYIFTLLNGDSDE
LLVGLRLAHDKVHFLRRIDGKAERVTFRQVNVADGRWHTMVLALSGHYAALTLDCDVPVE
MQLEKPFPEQMYTGGSTFFIGSRRRWSSLFSGLIRQLVLMPGSDASSRLCPSSEPTLSVL
SVPQVLLHLPVRPPTDQLPLYPYEAELRVTQRVPPVCISALIGQLWFSIEKRSLFLCNGT
SWVTMLHEKEKLDYVEDHQDLFTNSETFDIEVFHLPSLGLFIATANRDSRYGSIIYRWTD
GRFERFQNINTFDAQAWKFFTVGKKRFLVVANSGGCDDKFELSVIYKWRVKKQRFVKYQE
IQTHCARDWEAFRIHDDNFLAVANHRKGEMNHNIDSVIYRWNQHIKKFEMNQTIPTSGAY
DWEFFTIGPYHFLVVANTFNGKSTVISSTIYIWMGEKFQPFQSIMTYGAIDWEMFQIDNR
FFLAVANSQKLSDSSTVFYNINSTIYELNTTSQRFIKFQDIATSSALDWEFFTVGDDKFL
VVANSFDGASYSVNSVIYRWQGYEGFVPVHKLNTHGCRDWEFFTSSDGSYLISSSARAAY
SKVLKLKTYFQR
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgaagttgttcatctctttctgctgtttcatcagtagctggtcatcaccatgg
agaccatgcacaggtacacttccacacctagaacagcatctgttaccactggacctgctg
catcgtgtccttcctgtgggcagtcaccagactctggtccgcatggttcagtcccaggga
tcaagaggactgaaactttctggacctccacaggctctgagtttcccatcatcacagatc
tttaccaactgcaacttttttcctgctgagttttccattgtggtcacactgaagatccca
aaattaaatccgactaaggatgaatacatattcacacttttaaatggagattcagatgag
ctccttgttggtcttcgtcttgctcatgataaagtgcactttctgcggaggatagatggc
aaggcagagagagtgacattcagacaagtgaacgttgcagatggacgatggcataccatg
gtcctcgcactcagtggccactacgccgcactcactctggactgtgacgtcccagttgag
atgcagttggagaagccatttcctgaacagatgtacacaggtggctccacgttcttcatt
ggcagccggaggagatggagcagtctgttttcaggtttgattagacagcttgtcctcatg
cctggatcagatgcatcctcacgtctgtgtccctcatctgaacccacgttgtctgttctg
tcagttcctcaagttctattacaccttccagtcagacctccaaccgatcagcttccactt
tacccttatgaggcagagttgcgtgttactcagcgagttcctccagtgtgtatcagtgct
ctcatcggccagctgtggttcagcattgagaagagatcactgttcttgtgtaacggcact
tcatgggtcaccatgctgcacgagaaagaaaagttggattatgttgaagatcatcaggat
ctcttcacaaactcagagacatttgatattgaggtgtttcatctcccgtccctcggcttg
ttcatcgctacagcgaaccgtgactccagatatggttccataatttataggtggaccgac
ggcagatttgagcgatttcagaacatcaacacatttgatgcacaagcgtggaaattcttc
actgtgggaaaaaagaggttcttggtcgtcgcaaactctggaggatgtgatgataagttt
gagctctcagtgatttataaatggagagtgaagaagcaacgcttcgttaaatatcaggag
attcaaacacactgtgctcgtgactgggaggcctttcgtatccatgacgataatttcctc
gctgtggccaatcacagaaaaggtgagatgaaccacaacatcgacagtgtgatctacagg
tggaaccaacacatcaagaagtttgagatgaatcagaccatcccaacatctggagcctat
gactgggagttctttaccattggaccataccacttcctggtggtagccaacaccttcaat
ggaaaatccactgtcattagctccactatctacatctggatgggggaaaagttccagccg
ttccagtcaatcatgacatatggagcaattgattgggagatgtttcagatcgataacaga
ttctttctggctgtagcaaactctcagaagctcagtgactccagcacagttttctacaac
atcaactcaaccatttatgaacttaacaccacctcacagagattcattaagttccaggat
atcgcaacaagcagtgctttagattgggagttcttcactgtgggtgatgacaagttcctg
gtggtggccaactcatttgatggagcttcatactcagtaaacagtgttatatatcggtgg
cagggctatgaaggatttgtgcctgtacacaaactgaacacacacggatgcagagactgg
gaattcttcacttcctctgatggatcttacctcatttcctccagcgccagagctgcgtac
tctaaagtgctcaagctgaaaacctacttccagcgttga
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