Silurus meridionalis (southern catfish): 124382640
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Entry
124382640 CDS
T08004
Symbol
ccnt2a
Name
(RefSeq) cyclin-T2a isoform X1
KO
K15188
cyclin T
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
124382640 (ccnt2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smeo03021
]
124382640 (ccnt2a)
Transcription machinery [BR:
smeo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Super elongation complex (SEC)
124382640 (ccnt2a)
Brd4/P-TEFb complex
124382640 (ccnt2a)
7SK RNP complex
124382640 (ccnt2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CycT2-like_C
Cyclin_N
TFIIB
Motif
Other DBs
NCBI-GeneID:
124382640
NCBI-ProteinID:
XP_046700627
LinkDB
All DBs
Position
3:29789106..29797564
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AA seq
613 aa
AA seq
DB search
MAAHRGSSTKWFFSREQLEATPSRRCGVEPDRELSYRQQAANLIQDMGQRLNVSQLTINT
AIVYMHRFYMYHSFTKFHRNIISPTALFLAAKVEEQPRKLEHVIKVAHACLNPQEPPLDA
KSNAYLQQAQELVILETIVLQTLGFEITIEHPHTDVVKCSQLVRASKDLAQTSYFMATNS
LHLTTFCLQHRPTVIACVCIHLACKWSNWEIPVSTDGKHWWEYVDNSVTLELLDELTHEF
LQILEKTPSKLKRIRNWRVINSATQAAKKPKTDGPSSESTSFPDPSLAQDQSMVDAVSGV
STNAAFSKPSTSFPMSLQGSGLPLDHIAGTVQGTSYDFPGSADWPHDQALSDSYFLKQLP
LHLHRTEFPTVKQEHKAKSSAFPPPSTSQPLKMSLEKYKEKHAAELAAQKRRQEQPSTES
ESRDLFGGSGQVEHRKPQHPYAHLQQGSSGTSISSPLKMKLPLMGQEKARGDRREKGSSL
KLRLPVQAEKSGTSKEELKMKIKVSSERHSSSDEGASKSKHSSPLVSKEKHRHHHKHSNP
HSHGGGGGASALRSPGGDGAQGSSSSRKRTHTDASHNHHPKKNKSSKPAAAGGLRTSQHA
PESGQGVGGEPWS
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcaccggggctcgtcgaccaaatggttcttctccagggagcaactggaggcg
acgccgtcgcggcggtgcggagtcgagcccgaccgggagctctcgtaccggcaacaagcc
gcgaacctcatccaggatatgggacagaggctgaacgtctcgcaactgacgataaacacc
gcgattgtttacatgcacaggttttatatgtaccactcgttcaccaaattccatagaaac
atcatctctcccaccgcgttattcctggcggcgaaagtggaggagcaaccccggaaactt
gaacacgtgattaaagtggcgcatgcctgtttaaaccctcaagagcctcctttagacgca
aagagtaatgcgtacctccagcaagcgcaagagctggtgatacttgaaaccatagtgctg
cagactttaggctttgaaataactattgagcatcctcatactgatgttgtgaaatgttcc
caactagtgcgagcaagcaaggatctggcacagacttcctatttcatggctaccaacagc
ctccacctcaccacgttctgcctgcagcacaggcccacggtcatcgcttgcgtatgcatt
cacctagcctgcaagtggtctaactgggagatacccgtgtctaccgacggcaaacactgg
tgggagtacgtagacaattcggtcactctcgagctactagacgagctgacgcacgagttc
cttcagattttggagaagactcccagtaagttaaagaggattcgaaactggagggtaatt
aattctgcaacacaagctgcgaaaaaacctaaaacggacggaccatcatcagagagcacg
tcttttcccgacccctcgttagcccaggaccagtcgatggtagacgccgtttccggagtt
tccacgaacgcagccttttccaaaccttctacgtcgttccctatgtccctccaaggcagt
gggcttccattggaccatattgccggcactgtgcaaggcacatcatacgattttccaggc
tctgcggactggcctcatgaccaagcactctcagactcgtactttcttaaacagcttcct
ctgcatcttcaccgcaccgagtttcccacagtcaaacaggaacacaaggccaagtcgtca
gcgttcccgcccccttccacgtctcagccgctaaaaatgtccctggagaagtacaaggag
aagcacgcggccgaactggcggcccagaaacgcaggcaagagcagccaagcacggaatca
gagtccagagatttgttcggtgggtctggtcaggttgagcaccgaaagccgcaacaccct
tacgctcacttgcagcagggctcgagcggcacctccataagctcgccgctgaagatgaaa
ctgcccttaatgggccaggagaaagcccgtggagacagacgggagaaagggagctcgctg
aagctccgtcttcccgtccaggccgagaagagtggaacgagtaaagaggagctgaagatg
aagatcaaggtttcctcggaacgccacagctcgtcggatgaaggcgcgagcaaaagcaag
cattccagtccgctggtcagcaaggaaaagcatcggcaccaccataaacactcgaacccg
cactcgcacgggggcggaggaggcgcctctgccctcaggagccccgggggtgatggggcc
caaggctcgagctcgtcccgtaagaggacgcataccgacgccagccataatcaccacccc
aaaaagaacaaaagctccaagccagccgcagcaggtggactccgaacatctcagcacgct
cccgaaagcggacaaggagtcggcggagagccgtggtcctga
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